| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,596,415 | A→T | 6.4% | L213Q (CTG→CAG) | dctD‑III ← | C4‑dicarboxylate transport transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,596,415 | 0 | A | T | 6.4% | 351.4 / 10.8 | 109 | L213Q (CTG→CAG) | dctD‑III | C4‑dicarboxylate transport transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (53/49); new base T (3/4); total (56/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.11e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.40e-01 | |||||||||||
Only 100 of 110 total aligned reads displayed.
GCTCCTGTATCACCCGCAACAGCTTGGCCTGTTGGGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCACTGCCGGTTTCACCGCGGATCAACACGTTCACCGGCA > NC_002947/1596266‑1596562 | gCTCCTGTATCACCCGCAACAGCTTGGCCTGTTGGGCCAGGGGCCTGCCGTCGATTGCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACa < 2:1270830/150‑1 (MQ=255) cTCCTGTATCACCCGCAACAGCTTGGCCTGTTGGGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAg > 2:899740/1‑150 (MQ=255) tCCTGTATCACCCGCAACAGCTTGGCCTGTTGGGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGt > 1:2085779/1‑150 (MQ=255) tCCTGTATCACCCGCAACAGCTTGGCCTGTTGGGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGt > 2:1804590/1‑150 (MQ=255) ccTGTATCACCCGCAACACCTTCGCCTGTTGTGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACCCGTATCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGtt < 1:762624/150‑1 (MQ=255) tATCACCCGCAACAGCTTGGCCTGTTGGGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACTGTTCGGc > 2:1592620/1‑150 (MQ=255) tCACCCGCAACAGCTTGGCCTGTTGGGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACTGTTCGGcca < 2:2262198/150‑2 (MQ=255) tCACCCGCAACAGCTTGGCCTGTTGGGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCt < 2:478595/150‑1 (MQ=255) cccGCAACAGCTTGGCCTGTTGGGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACTGTTCGGccatga < 1:1592620/150‑5 (MQ=255) aaCAGCTTGGCCTGTTGGGCCGGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGc < 1:1382144/150‑1 (MQ=255) aaCAGCTTGGCCTGTTGGGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGc < 1:2275431/150‑1 (MQ=255) aaCACCTTGGCCTGTTGGGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCTGTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGc < 1:779812/150‑1 (MQ=255) cAGCTTGGCCTGTTGGGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGa > 2:229288/1‑150 (MQ=255) cTTGGCCTGTTGGGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTc > 1:1349908/1‑150 (MQ=255) ttGGCCTGTTGGGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCg > 1:1538732/1‑150 (MQ=255) tGGCCTGTTGGGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCgg < 1:1804590/150‑1 (MQ=255) tGGCCTGTTGGGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCgg < 2:1538732/150‑1 (MQ=255) ggCCTGTTGGGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCggg < 1:1042029/150‑1 (MQ=255) tattgtGGGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGa > 1:84238/6‑150 (MQ=255) ccTGTTGGGCCAAGCGCATGCTATCGATTTCGTCGAGGAACACGGTGTCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGGTCCCGTGAAGGCGCCGCTCTCATGTCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGa < 2:321367/150‑1 (MQ=255) cTGTTGGGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGAt < 1:1025686/150‑1 (MQ=255) tGTTGGGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATg < 2:364511/150‑1 (MQ=255) cAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGa < 1:306347/132‑1 (MQ=255) aGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAg > 2:132695/1‑150 (MQ=255) gggCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGtt > 1:89141/1‑150 (MQ=255) gCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTaa < 2:1224360/150‑1 (MQ=255) cATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAg < 2:763158/150‑1 (MQ=255) cATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAg < 2:1349908/150‑1 (MQ=255) tcGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACa > 2:1873628/1‑150 (MQ=255) gATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGTCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGGTAAGGGCTACaaa > 2:2130213/1‑150 (MQ=255) aTTTCGACGAGGAACCTGTTGCCACCGCTGGCATACTCCAGCTGTCTGATGCGTTGACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAg < 2:573147/150‑1 (MQ=255) tttCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACa < 2:512258/111‑1 (MQ=255) tttCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACa > 1:512258/1‑111 (MQ=255) ttCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAggg < 1:784836/150‑1 (MQ=255) tcgAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACa > 2:722540/1‑106 (MQ=255) tcgAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACa < 1:722540/106‑1 (MQ=255) tcgAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTg > 2:186082/1‑150 (MQ=255) cGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACggg < 1:166901/150‑1 (MQ=255) cACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGa > 1:1644614/1‑150 (MQ=255) cACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGa > 1:1644864/1‑150 (MQ=255) aCCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACTGTTCGGcca < 2:2002244/83‑2 (MQ=255) aCCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACTGTTCGGcca > 1:2002244/1‑82 (MQ=255) aCCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAg > 2:362951/1‑117 (MQ=255) aCCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAg < 1:362951/117‑1 (MQ=255) aCCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGaa > 1:861600/1‑150 (MQ=255) ccGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAg < 2:1644614/150‑1 (MQ=255) ccGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAg < 2:1644864/150‑1 (MQ=255) cGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGt > 2:1149007/1‑150 (MQ=255) gTTGGCATACTCCAGCTTGCCGATGCTTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTc > 2:2395979/1‑150 (MQ=255) ttGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCg < 1:186082/150‑1 (MQ=255) cATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTgca < 1:132695/150‑1 (MQ=255) cTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTgcaggca > 1:2134369/1‑150 (MQ=255) tCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTgcaggcag > 2:1888856/1‑150 (MQ=255) cAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCg > 1:1965164/1‑150 (MQ=255) cAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAAGGAGCg > 2:255487/1‑150 (MQ=255) aGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACGCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCgg < 1:899740/150‑1 (MQ=255) aTGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGc > 2:847304/1‑150 (MQ=255) aTGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGc < 2:2170118/150‑1 (MQ=255) tGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCt > 1:963419/1‑150 (MQ=255) cGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTcc < 1:1453302/150‑1 (MQ=255) gTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTggcgg > 1:369655/1‑108 (MQ=255) gTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTggcgg < 2:369655/108‑1 (MQ=255) tttACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCtt < 2:600103/150‑1 (MQ=255) ttACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTg < 2:89141/150‑1 (MQ=255) aCCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGcc > 1:132301/1‑150 (MQ=255) gcaatgcgcCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCAc > 1:84648/6‑150 (MQ=255) ccTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGaa > 2:1485939/1‑115 (MQ=255) ccTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGaa < 1:1485939/115‑1 (MQ=255) ccTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCAc > 1:1727942/1‑150 (MQ=255) cTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCACt > 1:2380984/1‑150 (MQ=255) gggCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTaa > 1:405441/1‑78 (MQ=255) gggCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTaa < 2:405441/78‑1 (MQ=255) gcCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGCAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCACTGCCGGt < 2:84238/150‑1 (MQ=255) gcCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCACTGCCGGt < 1:2143495/150‑1 (MQ=255) cccGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCACTGCCGGtt < 1:1149007/150‑1 (MQ=255) ccGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCACTGCCGGttt > 2:903233/1‑150 (MQ=255) tGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGTAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCACTGCCGGTTTCAc > 2:1619015/1‑150 (MQ=255) tGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCACTGCCGGTTTCAc > 2:523679/1‑150 (MQ=255) gAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCACTGCCGGTTTCAcc < 1:1619015/150‑1 (MQ=255) ggCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCACTGCCGGTTTCACcgcg < 1:229288/150‑1 (MQ=255) gcgcCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCtt < 1:2221617/128‑1 (MQ=255) gcgcCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCtt > 2:2221617/1‑128 (MQ=255) gccgcTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCACTGCCGGTTTCACCGCGGAt > 1:732148/1‑150 (MQ=255) ccgcTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCACTGCCGGTTTCACCGCGGATc > 2:2357365/1‑150 (MQ=255) cgcTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCACTGCCGGTTTCACCGCGGATCa > 1:1362654/1‑150 (MQ=255) tctcATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCGGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCACTGCCGGTTTCACCGCGGATCAaca > 2:1426369/1‑150 (MQ=255) cATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGaa < 1:699295/88‑1 (MQ=255) cATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGaa > 2:699295/1‑88 (MQ=255) gaggCCGAACTGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGaa < 2:1320718/85‑1 (MQ=255) gaggCCGAACTGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGaa > 1:1320718/3‑87 (MQ=255) aTGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCACTGCCGGTTTCACCGCGGATCAACACGtt > 1:326815/1‑150 (MQ=255) tGGCCGAACAGTTCGACCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAg < 2:758295/53‑1 (MQ=255) ccGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCACTGCCGGTTTCACCGCGGATCAACACGTTCAcc < 2:2380984/150‑1 (MQ=255) cGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAggg < 2:653052/61‑1 (MQ=255) cGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAggg > 1:653052/1‑61 (MQ=255) cGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGc < 1:920528/114‑1 (MQ=255) cGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCACTGCCGGTTTCACCGCGGATCAACACGTTCACCg > 2:172742/1‑150 (MQ=255) gAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCACTGCCGGTTTCACCGCGGATCAACACGTTCACCgg < 2:1965164/150‑1 (MQ=255) aCAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCACTGCCGGTTTCACCGCGGATCAACACGTTCACCGGCa < 1:2279710/150‑1 (MQ=255) aCAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCACTGCCGGTTTCACCGCGGATCAACACGTTCACCGGCa < 2:1573735/150‑1 (MQ=255) | GCTCCTGTATCACCCGCAACAGCTTGGCCTGTTGGGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCACTGCCGGTTTCACCGCGGATCAACACGTTCACCGGCA > NC_002947/1596266‑1596562 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |