| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,676,202 | C→G | 6.9% | intergenic (+22/‑38) | hom → / → thrC | homoserine dehydrogenase/threonine synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,676,202 | 0 | C | G | 6.9% | 275.8 / 10.1 | 87 | intergenic (+22/‑38) | hom/thrC | homoserine dehydrogenase/threonine synthase |
| Reads supporting (aligned to +/- strand): ref base C (49/32); new base G (3/3); total (52/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.81e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.76e-01 | |||||||||||
CCAATGATCCTGGTGACCCATGGCGTGGTCGAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑ACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACGGCGGCCTGTACGTGCCGGAAAACCTGCCACGCT > NC_002947/1676058‑1676351 | ccAATGATCCTGGTGACCCATGGCGTGGTCGAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCcgcgc < 2:2391240/150‑1 (MQ=255) aaTGATCCTGGTGACCCATGGCGTGGTCGAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGcgg > 1:967575/1‑150 (MQ=255) attacccTGGTGACCCATGGCGTTGTCTAGCATCGTATCCATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACCAATCTTGCCGACGCTCCGCCCGCGcggc < 2:879176/145‑1 (MQ=255) aTGATCCTGGTGACCCATGGCGTGGTCGAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGcggc > 2:209976/1‑150 (MQ=255) tCCTGGTGACCCATGGCGTGGTCGAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGcggccccg > 2:1042406/1‑150 (MQ=255) ccTGGTGACCCATGGCGTGGTCGAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGAGcggccccgg > 1:1910542/1‑150 (MQ=255) cTGGTGACCCATGGCGTGGTCGAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCGCGGGcggcccgtcg < 1:1444511/150‑5 (MQ=255) gTGCCCCATGGCGGGGTCGAGCAGCGTAGCAATGACGCCAGCGTCGCTCTGGAAGCCCTGAAGGACGTGGTCGGCAAGGTGGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCggccccggcccc < 2:461939/150‑1 (MQ=255) gTGACCCATCGCGTCGTCGTGCAGCGGATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGGCGCCCGCGCggccccggcccc > 2:1241534/1‑150 (MQ=255) ccATGGCGTGGTCGAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACCTACATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCAt > 1:1833949/1‑150 (MQ=255) ccATGGCGTGGTCGAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGTCGACGGGCCGCCcgcgc > 1:1551528/1‑133 (MQ=255) ccATGGCGTGGTCGAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGTCGACGGGCCGCCcgcgc < 2:1551528/133‑1 (MQ=255) ccATGGCGTGGTCGAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCAt > 1:1454648/1‑150 (MQ=255) ggCGTGGTCGAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGaa < 2:1981817/150‑1 (MQ=255) cGTGGTCGAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAgg < 2:1259140/150‑1 (MQ=255) ggTCGAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGttt < 2:928032/150‑1 (MQ=255) cGAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCa < 1:335200/150‑1 (MQ=255) gAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCGCGggcggc > 1:1662984/1‑123 (MQ=255) gAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCGCGggcggc < 2:1662984/123‑1 (MQ=255) gAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCGCGGGcggccc > 1:1190374/1‑125 (MQ=255) gAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCGCGGGcggccc < 2:1190374/125‑1 (MQ=255) aTCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCt < 2:1701191/150‑1 (MQ=255) tCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCta < 2:962840/150‑1 (MQ=255) cAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCtat > 2:1406477/1‑150 (MQ=255) tGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATc < 1:2265149/150‑1 (MQ=255) tGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATc > 1:812956/1‑150 (MQ=255) gCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑a > 2:2273378/1‑150 (MQ=255) gCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑a > 2:697341/1‑150 (MQ=255) gCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑a < 2:812956/150‑1 (MQ=255) cATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑Acc > 1:401401/1‑150 (MQ=255) aTCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑Accc > 1:905556/1‑150 (MQ=255) aTCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑Accc > 1:460037/1‑150 (MQ=255) gtcgCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑ACCcgcg > 1:2354010/1‑150 (MQ=255) tcgCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑AGAcgcgc > 1:34187/1‑149 (MQ=255) tcgCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑ACCCGCgg > 2:967376/1‑150 (MQ=255) ctctGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑ACCCGCGGCCa < 2:268517/150‑1 (MQ=255) tctGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑ACCCGCGGCCAg > 1:1275943/1‑150 (MQ=255) tctGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑ACCCGCGGCCAg < 1:1560874/150‑1 (MQ=255) tctGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑ACCCGCGGCCAg > 2:460643/1‑150 (MQ=255) tctGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑ACCCGCGGCCAg > 2:382991/1‑150 (MQ=255) ctGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑ACCCGCGGCCAgg < 2:1910542/150‑1 (MQ=255) tGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑ACCCGCGGCCAGGc > 2:1285442/1‑150 (MQ=255) ggAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCtata > 1:10246/1‑130 (MQ=255) ggAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCtata < 2:10246/130‑1 (MQ=255) gAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑ACCCGCGGCCAGGCAc > 1:2193315/1‑150 (MQ=255) aGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑ACCCGCGGCCAGGCACCg < 2:2354010/150‑1 (MQ=255) cTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTGAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑ACCCGCGGCCAGGCACCGGccc > 1:268750/1‑150 (MQ=255) cTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑ACCCGCGGCCa < 2:1362772/139‑1 (MQ=255) cTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑ACCCGCGGCCa > 1:1362772/1‑139 (MQ=255) ggACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑ACCCGCGGACAGGCCCCGGCCCTGCAt < 2:34187/150‑1 (MQ=255) gccgccAAGGATGTGCGCATTCGCGTCGAGCAGCGCAACTGACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGGGCTCTATCATT‑ATCCGCGGCCAGTCACCGGCCCTGAATTTCGAAg > 2:759549/6‑150 (MQ=255) gCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑ACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGt < 1:382991/150‑1 (MQ=255) aaGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑ACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGtgc > 2:2086084/1‑150 (MQ=255) gTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑ACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGtgctgc < 2:1829951/150‑1 (MQ=255) ttGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑ACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGTgctgct < 1:209976/150‑1 (MQ=255) gtgCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑ACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTgctgg < 2:199535/150‑1 (MQ=255) gcATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑ACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGctggctgg > 2:670659/1‑150 (MQ=255) aTTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑ACCCGCGGCCAGGCACCGGCCCTGAAtt > 1:1528719/1‑126 (MQ=255) aTTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑ACCCGCGGCCAGGCACCGGCCCTGAAtt < 2:1528719/126‑1 (MQ=255) gcgTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATAAGTCATTCCCAG‑CAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGctggcctggc > 2:1270296/1‑150 (MQ=255) gcagcTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑ACCCGCGGCCAg > 2:1941460/1‑99 (MQ=255) gcagcTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑ACCCGCGGCCAg < 1:1941460/99‑1 (MQ=255) gcagcTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑ACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGAc > 1:376064/1‑150 (MQ=255) gcTTAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑ACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGAcggc > 1:970966/1‑150 (MQ=255) gcTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑ACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGAcggc < 2:2193315/150‑1 (MQ=255) gcTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCGAGATCAGA‑ACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGAcggc > 1:293773/1‑150 (MQ=255) cTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCtat < 1:302190/77‑1 (MQ=255) cTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCtat > 2:302190/1‑77 (MQ=255) cTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑ACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGAcggcg > 2:294149/1‑150 (MQ=255) aCTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAg < 2:1780247/78‑1 (MQ=255) aCTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAg > 1:1780247/1‑78 (MQ=255) tAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑ACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGTCAGCGACGGCGGCCTGt > 1:1454375/1‑150 (MQ=255) tAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑ACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACGGCGGCCTGt > 1:783498/1‑150 (MQ=255) tAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑ACCCGCGGAAAAACACCAGCCCGGAGCGGGTGGTACAGGCTGCTGGCGGGCCGGGCCAGCGACGGCGGCCTGt > 2:2330105/1‑150 (MQ=255) aCAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑ACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACGGCGGCCTGTAc > 1:2272846/1‑150 (MQ=255) cAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑ACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACGGCGGCCTGTACg > 1:1529550/1‑150 (MQ=255) aaaTATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑ACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACGGCGGCCTGTACGt > 2:367388/1‑150 (MQ=255) aaaTATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑ACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACGGCGGCCTGTACGt > 2:367545/1‑150 (MQ=255) atatTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑ACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACGGCGGCCTGTACGTGc > 2:1927158/1‑150 (MQ=255) atTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑ACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACGGCGGCCTGTACGTGCCg < 2:2272846/150‑1 (MQ=255) cGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTatat < 2:1533521/60‑1 (MQ=255) cGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTatat > 1:1533521/1‑60 (MQ=255) ggggCCGCGCGGGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑ACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACGGCGGCCTGTACGTGCCGGAAAACCt > 2:1694538/2‑150 (MQ=255) gggCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑ACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACGGCGGCCTGTACGTGCCGGAAAACCTg > 1:1453508/1‑150 (MQ=255) gggCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑ACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACGGCGGCCTGTACGTGCCGGAAAACCTg < 1:2330105/150‑1 (MQ=255) gggCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑ACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTCGCCTGGCCAGCGCCGGCGGCCTGTACGTGCCGGAAAACCTg > 2:2396816/1‑150 (MQ=255) ggCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑ACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACGGCGGCCTGTACGTGCCGGAAAACCTGc < 2:376064/150‑1 (MQ=255) gccgccCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑ACCCGCGGCCAGGCACCGGCCCTGAATTTCGaa < 1:715483/91‑1 (MQ=255) gccgccCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑ACCCGCGGCCAGGCACCGGCCCTGAATTTCGaa > 2:714075/1‑91 (MQ=255) gccgccCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑ACCCGCGGCCAGGCACCGGCCCTGAATTTCGaa > 2:715483/1‑91 (MQ=255) gccgccCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑ACCCGCGGCCAGGCACCGGCCCTGAATTTCGaa < 1:714075/91‑1 (MQ=255) gcccgcGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑ACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACGGCGGCCTGTACGTGCCGGAAAACCTGCCACg < 1:967376/150‑1 (MQ=255) cccgcGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑ACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACGGCGGCCTGTACGTCCCCGCAACCATGCcgcgg > 2:1943498/1‑149 (MQ=255) ccgcGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑ACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACGGCGGCCTGTACGTGCCGGAAAACCTGCCACGCt > 1:1987217/1‑150 (MQ=255) | CCAATGATCCTGGTGACCCATGGCGTGGTCGAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGT‑ACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACGGCGGCCTGTACGTGCCGGAAAACCTGCCACGCT > NC_002947/1676058‑1676351 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |