Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 1,684,314 | T→C | 7.0% | F284S (TTT→TCT) | PP_1478 → | xenobiotic reductase |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 1,684,314 | 0 | T | C | 7.0% | 257.2 / 6.5 | 85 | F284S (TTT→TCT) | PP_1478 | xenobiotic reductase |
Reads supporting (aligned to +/- strand): ref base T (42/37); new base C (2/4); total (44/41) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 4.23e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.38e-01 |
CTGGGTCGAGGACGGCTGGAACCCGGATGAAACCGTCGAACTGGCTCGTCGCCTGCGGGTGCTGGGTGTCGACCTGATCGATGTGTCCTCCGGTGGTACCTCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACTGAACCTGCCCAGGCCGAGCACATTCTGCGTACCGGGCAGGCCGACGTGATCTTCCTGGCTCGGGAGCTGCTGCGCGATCCTTACTGGCCG > NC_002947/1684168‑1684462 | ctgGGTCGAGGACGGCTGGAACCCGGATGAAACCGTCGAACTGGCTCGTCGCCTGCGGGTGCTGGGTGTCGACCTGATCGATGTGTCCTCCGGTGGTACCTCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACTCGCTTTGc < 1:1810045/150‑1 (MQ=255) tgGGTCGAGGACGGCTGGAACCCGGATGAAACCGTCGAACTGGCTCGTCGCCTGCGGGTGCTGGGTGTCGACCTGATCGATGTGTCCTCCGGTGGTACCTCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCa < 1:1240200/150‑1 (MQ=255) gTCGAGGACGGCTGGAACCCGGATGAAACCGTCGAACTGGCTCGTCGCCTGCGGGTGCTGGGTGTCGACCTGATCGATGTGTCCTCCGGTGGTACCTCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCagag > 1:1756903/1‑150 (MQ=255) gACGGCTGGAACCCGGATGAAACCGTCGAACTGGCTCGTCGCCTGCGGGTGCTGGGTGTCGACCTGATCGATGTGTCCTCCGGTGGTACCTCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTCTGCAAAGCGCGtc < 2:117784/150‑2 (MQ=255) gACGGCTGGAACCCGGATGAAACCGTCGAACTGGCTCGTCGCCTGCGGGTGCTGGGTGTCGACCTGATCGATGTGTCCTCCGGTGGTACCTCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTCTGCAAAGCGCGtc < 2:223463/150‑2 (MQ=255) gACGGCTGGAACCCGGATGAAACCGTCGAACTGGCTCGTCGCCTGCGGGTGCTGCGTGTCGACCTTATCGATGTGTCCTCCGGTGGTACCTCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTCTGCAAAGCGCGtc < 1:286514/150‑2 (MQ=255) ggCTGGAACCCGGATGAAACCGTCGAACTGGCTCGTCGCCTGCGGGTGCTGGGTGTCGACCTGATCGATGTGTCCTCCGGTGGTACCTCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTTCAGAGCGCGTgcgc > 1:929552/1‑150 (MQ=255) ggAACCCGGATGAAACCGTCGAACTGGCTCGTCGCCTGCGGGTGCTGGGTGTCGACCTGATCGATGTGTCCTCCGGTGGTACCTCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAgg < 1:582496/150‑1 (MQ=255) ccGGATGAAACCGTCGAACTGGCTCGTCGCCTGCGGGTGCTGGGTGTCGACCTGATGGATGTGTCCTCCGGTGGTACCTCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCa > 2:800423/1‑150 (MQ=255) ccGGATGAAACCGTCGAACTGGCTCGTCGCCTGCGGGTGCTGGGTGTCGACCTGATCGATGTGTCCTCCGGTGGTACCTCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCa < 2:2058541/150‑1 (MQ=255) ccGGATGAAACCGTCGAACTGGCTCGTCGCCTGCGGGTGCTGGGTGTCGACCTGATCGATGTGTCCTCCGGTGGTACCTCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCa < 1:2151491/150‑1 (MQ=255) gAAACCGTCGAACTGGCTCGTCGCCTGCGGGTGCTGGGTGTCGACCTGATCGATGTGTCCTCCGGTGGTACCTCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATc < 2:753796/150‑1 (MQ=255) ccGTCGAACTGGCTCGTCGCCTGCGGGTGCTGGGTGTCGACCTGATCGATGTGTCCTCCGGTGGTACCTCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCa > 2:1570217/1‑150 (MQ=255) cGTCGAACTGGCTCGTCGCCTGCGGGTGCTGGGTGTCGACCTGATCGATGTGTCCTCCGGTGGTACCTCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCAc > 2:1981859/1‑150 (MQ=255) gTCGAACTGGCTCGTCGCCTGCGGGTGCTGGGTGTCGACCTGATCGATGTGTCCTCCGGTGGTACCTCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCAcc > 1:984046/1‑150 (MQ=255) tcgtcgCCTGCGGGTGCTGGGTGTCGACCTGATCGATGTGTCCTCCGGTGGTACCTCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCgg > 2:296504/1‑150 (MQ=255) tcgtcgCCTGCGGGTGCTGGGTGTCGACCGGATCGATGTGTCCTCCGGTGGTACCTCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACcggcgg > 1:1109564/1‑150 (MQ=255) tcgCCTGCGGGTGCTGGGTGTCGACCTGATCGATGTGTCCTCCGGTGGTACCTCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCAt < 2:1756903/150‑1 (MQ=255) gCCTGCGGGTGCTGGGTGTCGACCTGATCGATGTGTCCTCCGGTGGTACCTCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGa > 1:1213525/1‑150 (MQ=255) gTGCTGGGTGTCGACCTGATCGATGTGTCCTCCGGTGGTACCTCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACTGaa < 1:662453/150‑1 (MQ=255) tGGGTGTCGACCTGATCGATGTGTCCTCCGGTGGTACCTCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCaa > 1:1398714/1‑103 (MQ=255) tGGGTGTCGACCTGATCGATGTGTCCTCCGGTGGTACCTCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCaa < 2:1398714/103‑1 (MQ=255) tCGACCTGATCGATGTGTCCTCCGGTGGTACCTCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACTGAACCTGCCCAgg < 1:752304/150‑1 (MQ=255) tCGACCTGATCGATGTGTCCTCCGGTGGTACCTCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACTGAACCTGCCCAgg > 2:2277297/1‑150 (MQ=255) gACCTGATCGATGTGTCCTCCGGTGGTACCTCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGAt < 1:553956/131‑1 (MQ=255) gACCTGATCGATGTGTCCTCCGGTGGTACCTCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGAt > 2:553956/1‑131 (MQ=255) gACCTGATCGATGTGTCCTCCGGTGGTACCTCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACTGAACCTGCCCAGGcc > 2:785372/1‑150 (MQ=255) gACCTGATCGATGTGTCCTCCGGTGGTACCTCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACTGAACCTGCCCAGGcc > 1:366227/1‑150 (MQ=255) aCCTGATCGATGTGTCCTCCGGTGGTACCTCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATg > 2:2086501/1‑128 (MQ=255) aCCTGATCGATGTGTCCTCCGGTGGTACCTCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATg < 1:2086501/128‑1 (MQ=255) cTGATCGATGTGTCCTCCGGTGGTACCTCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACTGAACCTGCCCAGGCCGAg < 1:1242191/150‑1 (MQ=255) aTCGATGTGTCCTCCGGTGGTACCTCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACTGAACCTGCCCAGGCCGAGcac > 2:553902/1‑150 (MQ=255) aTCGATGTGTCCTCCGGTGGTACCTCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACTGAACCTGCCCAGGCCGAGcac > 1:70210/1‑150 (MQ=255) aTGTGTCCTCCGGTGGTACCTCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACTGAACCTGCCCAGGCCGAGCACATTc > 1:2304231/1‑150 (MQ=255) tgtCCTCCGGTGGTACCTCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACTGAACCTGCCCAGGCCGAGCACATTCTGc > 2:1947326/1‑150 (MQ=255) tgtCCTCCGGTGGTACCTCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACTGAACCTGCCCAGGCCGAGCACATTCTGc < 2:2304231/150‑1 (MQ=255) tcctccGGTGGTACCTCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCaa > 2:2130954/1‑80 (MQ=255) tcctccGGTGGTACCTCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCaa < 1:2130954/80‑1 (MQ=255) tcctccGGTGGTACCTCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATg > 2:789624/1‑114 (MQ=255) tcctccGGTGGTACCTCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATg < 1:789624/114‑1 (MQ=255) tcctccGGTGGTACCTCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACTGAACCTGCCCAGGCCGAGCACATTCTGCGt > 2:2325312/1‑150 (MQ=255) ctccGGTGGTACCTCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACTGAACCTGCCCAGGCCGAGcaca > 2:2094078/1‑140 (MQ=255) ctccGGTGGTACCTCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACTGAACCTGCCCAGGCCGAGcaca < 1:2094078/140‑1 (MQ=255) ctccGGTGGTACCTCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACTGAACCTGCCCAGGCCGAGCACATTCTGCGTAc > 1:85369/1‑150 (MQ=255) tccGGTGGTACCTCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCAc < 2:94202/116‑1 (MQ=255) tccGGTGGTACCTCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCAc > 1:94202/1‑116 (MQ=255) ccGGTGGTACCTCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCACGGAAGCAGAGATCGGGACTTGGATCGTCGGCATGATCACTGAACCTGCCCAGGCCGAGCACATTCTGCGTACCg < 1:296504/150‑1 (MQ=255) ggtACCTCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACTGAACCTGCCCAGGCCGAGCACATTCTGCGTACCGGGCAg < 2:366227/150‑1 (MQ=255) gtACCTCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACTGAACCTGCCCAGGc < 2:493535/124‑1 (MQ=255) gtACCTCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACTGAACCTGCCCAGGc > 1:493535/1‑124 (MQ=255) cTCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACTGAACCTGCCCAGGCCGAGCACATTCTGCGTACCGGGCAGGCCGa > 2:2015733/1‑150 (MQ=255) tCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTgc < 1:912291/61‑1 (MQ=255) tCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTgc > 2:912291/1‑61 (MQ=255) tCGGTCAACGCCGAAATTCCTACAGCCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACTGAACCTGCCCAGGCCGAGCACATTCTGCGTACCGGGCAGGCCGAc < 1:1134619/150‑1 (MQ=255) gTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACTGAACCTGCCCAGGCCGAGCACATTCTGCGTACCGGGCAgg < 1:1492318/142‑1 (MQ=255) gTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACTGAACCTGCCCAGGCCGAGCACATTCTGCGTACCGGGCAgg > 2:1492318/1‑142 (MQ=255) tCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACTGAACCTGCCCAGGCCGAGCACATTCTGCGTACCGGGCAGGCCGACGTGa < 1:356555/150‑1 (MQ=255) gCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCAcc > 2:2234465/1‑81 (MQ=255) gCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCAcc < 1:2234465/81‑1 (MQ=255) gCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACTGAACCTGCCCAGGCCGAGCACATTCTGCGTACCGGGCAGGCCGACGTGATCTTc > 1:1616414/1‑150 (MQ=255) cGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACTGAACCTGCCCAGGCCGAGCACATTCTGCGTACCGGGCAGGCCGACGTGATCTTCCt > 2:1331668/1‑150 (MQ=255) gAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACTGAACCTGCCCAGGCCGAGCACATTCTGCGTACCGGGCAGGCCGACGTGATCTTCCTg > 2:1685425/1‑150 (MQ=255) gAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACTGAACCTGCCCAGGCCGAGCACATTCTGCGTACCGGGCAGGCCGACGTGATCTTCCTg < 1:800423/150‑1 (MQ=255) aTTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACTGAACCTGCCCAGGCCGAGCACATTCTGCGTACCGGGCAGGCCGACGTGATCTTCCTGGCt < 1:1570217/150‑1 (MQ=255) tACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACTGAACCTGCCCAGGCCGAGCACATTCTGCGTACCGGGCAGGCCGACGTGATCTTCCTGGCTCGGGa < 2:929552/150‑1 (MQ=255) tACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACTGAACCTGCCCAGGCCGAGCACATTCTGCGTACCGGGCAGGCCGACGTGATCTTCCTGGCTCGGGa < 2:4660/150‑1 (MQ=255) aCAGGCCCTGGCTATCAGACGCGCTCTGCAAAGCGCGtc > 1:532348/1‑38 (MQ=18) aCAGGCCCTGGCTATCAGACGCGCTCTGCAAAGCGCGtc < 2:532348/39‑2 (MQ=18) gCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACTGAACCTGCCCAGGCCGAGCACATTCTGCGTACCGGGCAGGCCGACGTGATCTTCCt > 1:611596/1‑136 (MQ=255) gCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACTGAACCTGCCCAGGCCGAGCACATTCTGCGTACCGGGCAGGCCGACGTGATCTTCCt < 2:611596/136‑1 (MQ=255) ccTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACTGAACCTGCCCAGGCCGAGCACATTCTGCGTACGGGGCAGGCCGACGTGATCTTCCTGGCTCGGGAGctgctg > 2:2195762/1‑150 (MQ=255) ccTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACTGAACCTGCCCAGGCCGAGCACATTCTGCGTACCGGGCAGGCCGACGTGATCTTCCTGGCTCGGGAGctgctg > 1:1858467/1‑150 (MQ=255) ggCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACt < 1:2137198/75‑1 (MQ=255) ggCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACt > 2:2137198/1‑75 (MQ=255) ggCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACTGAACCTGCCCAGGCCGAGCACATTCTGCGTACCGGGCAGGCCGACGTGATCTTCCTGGCTCGGGAGCTGCTgcgc > 2:217699/1‑150 (MQ=255) cTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACTGAACCTGCCCAGGCCGAGCACATTCTGCGTACCGGGCAGGCCGACGTGATCTTCCTGGCTCGGGAGCTGCTGCGCGa < 2:1616414/150‑1 (MQ=255) tATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACTGAACCTGCCCAGGCCGAGCACATTCTGCGTACCGGGCAGGCCGACGTGATCTTCCTGGCTCGGGAGCTGCTGCGCGAt > 1:1560981/1‑150 (MQ=255) aTCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACTGAACCTGCCCAGGCCGAGCACATTCTGCGTACCGGGCAGGCCGACGTGATCTTCCTGGCTCGGGAGCTGCTGCGCGATc < 1:2015733/150‑1 (MQ=255) tCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACTGAACCTGccc < 2:419614/80‑1 (MQ=255) tCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACTGAACCTGccc > 1:419614/1‑80 (MQ=255) cgcgCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACTGAACCTGCCCAGGCCGAGCACATTCTGCGTACCGGGCAGGCCGACGTGATCTTCCTGGCTCGGGAGCtgctgc > 2:628901/1‑138 (MQ=255) cgcgCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACTGAACCTGCCCAGGCCGAGCACATTCTGCGTACCGGGCAGGCCGACGTGATCTTCCTGGCTCGGGAGCtgctgc < 1:628901/138‑1 (MQ=255) cgcTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACTGAACCTGCCCAGGCCGAGCACATTCTGCGTACCGGGCAGGCCGACGTGATCTTCCTGGCTCGGGAGCTGCTGCGCGATCCTTACTgg < 1:2325312/150‑1 (MQ=255) gcTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACTGAACCTGCCCAGGCCGAGCACATTCTGCGTACCGGGCAGGCCGACGTGATCTTCCTGGCTCGGGAGCTGCTGCGCGATCCTTACTGGc > 1:121832/1‑150 (MQ=255) gcTCTGCAAAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACTGAACCTGCCCAGGCCGAGCACATTCTGCGTACCGGGCAGGCCGACGTGATCTTCCTGGCTCGGGAGCTGCTGCGCGATCCTTACTGGc > 2:2384559/1‑150 (MQ=255) tttGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACTGAACCTGCCCAGGCCGAGCACATTCTGCGTACCGGGCAGGCCGACGTGATCTTCCTGGc < 1:2238456/119‑1 (MQ=255) tttGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACTGAACCTGCCCAGGCCGAGCACATTCTGCGTACCGGGCAGGCCGACGTGATCTTCCTGGc > 2:2238456/1‑119 (MQ=255) tttGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACTGAACCTGCCCAGGCCGAGCACATTCTGCGTACCGGGCAGGCCGACGTGATCTTCCTGGCTCGGGAGCtgctgc > 2:1479494/1‑133 (MQ=255) tttGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACTGAACCTGCCCAGGCCGAGCACATTCTGCGTACCGGGCAGGCCGACGTGATCTTCCTGGCTCGGGAGCtgctgc < 1:1479494/133‑1 (MQ=255) tttGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACTGAACCTGCCCAGGCCGAGCACATTCTGCGTACCGGGCAGGCCGACGTCATCTTCCTGGCTCGGGAGCTGCTGCGCGATCCTTACTGGCCg > 2:722417/1‑150 (MQ=255) | CTGGGTCGAGGACGGCTGGAACCCGGATGAAACCGTCGAACTGGCTCGTCGCCTGCGGGTGCTGGGTGTCGACCTGATCGATGTGTCCTCCGGTGGTACCTCGGTCAACGCCGAAATTCCTACAGGCCCTGGCTATCAGACGCGCTTTGCAGAGCGCGTGCGCAAGGAAGCAGAGATCGCCACCGGCACCGTCGGCATGATCACTGAACCTGCCCAGGCCGAGCACATTCTGCGTACCGGGCAGGCCGACGTGATCTTCCTGGCTCGGGAGCTGCTGCGCGATCCTTACTGGCCG > NC_002947/1684168‑1684462 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |