| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,708,205 | G→C | 5.4% | intergenic (‑48/+3) | PP_1502 ← / ← PP_1503 | OmpA family protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,708,205 | 0 | G | C | 5.4% | 235.5 / 2.2 | 75 | intergenic (‑48/+3) | PP_1502/PP_1503 | OmpA family protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (34/36); new base C (2/2); total (36/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.86e-01 | |||||||||||
GTTGGTGCGGGCCGATTCCAGGTTGGCATTCGGATCATGCGAGCAGGCAGCAAGACCGACGCTCAGGGCCAGCAGGGCGGGAATCATTACGTGTTTGCGCATAGTGTTCATCCTTTGATCGTGTGCGAAGGCTAAGGTTGGCGGGGCAGGGCTCACTGAGCGCTGCGCAGGCCTTCCTCACGTACGTCCTGAACGCCCTGGCGGGCATCCTGCACGGCCTTCTGGGCTTTGGCTGCCTGGGCCTTGCGTTCGGCGAGGCGTGCATCCCACTCGGCCTGTTGGGCCAGTCGCTTGGCCTC > NC_002947/1708056‑1708354 | gTTGGTGCGGGCCGATTCCAGGTTGGCATTCGGATCATGCGAGCAGGCAGCAAGACCGACGCTCAGGGCCAGCAGGGCGGGAATCATTACGTGTTTGCGCATAGTGTTCATCCTTTGATCGTGTGCGAAGGCTAAGGTTGGCGGGGCAgg > 1:375004/1‑150 (MQ=255) ttGGTGCGGGCCGATTCCAGGTTGGCATTCGGATCATGCGAGCAGGCAGCAAGACCGACGCTCAGGGCCAGCAGGGCGGGAATCATTACGTGTTTGCGCATAGTGTTCATCCTTTGATCGTGTGCGAAGGCTAAGGTTGGCGGGGCAggg < 2:375004/150‑1 (MQ=255) gCGGGCCGATTCCAGGTTGGCATTCGGATCATGCGAGCAGGCAGCAAGACCGACGCTCAGGGCCAGCAGGGCGGGAATCATTACGTGTTTGCGCATAGTGTTCATCCTTTGATCGTGTGCGAAGGCTAAGGTTGGCGGGGCAGGGCTCAc < 1:2077902/150‑1 (MQ=255) ggCCGATTCCAGGTTGGCATTCGGATCATGCGAGCAGGCAGCAAGACCGACGCTCAGGGCCAGCAGGGCGGGAATCATTACGTGTTTGCGCATAGTGTTCATCCTTTGATCGTGTGCGAAGGCTAAGGTTGGCGGGGCAGGGCTCACTGa > 1:812500/1‑150 (MQ=255) ggCCGATTCCAGGTTGGCATTCGGATCATGCGAGCAGGCAGCAAGACCGACGCTCAGGGCCAGCAGGGCGGGAATCATTACGTGTTTGCGCATAGTGTTCATCCTTTGATCGTGTGCGAAGGCTAAGGTTGGCGGGGCAGGGCTCACTGa < 1:2186558/150‑1 (MQ=255) ccGATTCCAGGTTGGCATTCGGATCATGCGAGCAGGCAGCAAGACTGACGCTCAGGGCCAGCAGGGCGGGAATCATTACGTGTTTGCGCATAGTTTTCATCCTTTGATCGTGTGCGAAGGCGAAGGTTGGCGGGGCAGGGCTCACTGAgc < 1:444353/150‑1 (MQ=255) ccGATTCCAGGTTGGCATTCGGATCATGCGAGCAGGCAGCAAGACCGACGCTCAGGGCCAGCAGGGCGGGAATCATTACGTGTTTGCGCATAGTGTTCATCCTTTGATCGTGTGCGAAGGCTAAGGTTGGCGGGGCAGGGCTCACTGAgc < 2:315681/150‑1 (MQ=255) gATTCCAGGTTGGCATTCGGATCATGCGAGCAGGCAGCAAGACCGACGCTCAGGGCCAGCAGGGCGGGAATCATTACGTGTTTGCGCATAGTGTTCATCCTTTGATCGTGTGCGAAGGCTAAGGTTGGCGGGGCAGGGCTCACTGAgcgc < 2:812500/150‑1 (MQ=255) aTTCCAGGTTGGCATTCGGATCATGCGAGCAGGCAGCAAGACCGACGCTCAGGGCCAGCAGGGCGGGAATCATTACGTGTTTGCGCATAGTGTTCATCCTTTGATCGTGTGCGAAGGCTAAGGTTGGCGGGGCAGGGCTCACTGAGCGCt < 1:493741/150‑1 (MQ=255) tCCAGGTTGGCATTCGGATCATGCGAGCAGGCAGCAAGACCGACGCTCAGGGCCAGCAGGGCGGGAATCATTACGTGTTTGCGCATAGTGTTCATCCTTTGATCGTGTGCGAAGGCTAAGGTTGGCGGGGCAGGGCTCACTGAGCGCTgc < 2:154386/150‑1 (MQ=255) tCCAGGTTGGCATTCGGATCATGCGAGCAGGCAGCAAGACCGACGCTCAGGGCCAGCAGGGCGGGAATCATTACGTGTTTGCGCATAGTGTTCATCCTTTGATCGTGTGCGAAGGCTAAGGTTGGCGGGGCAGCGCTCAGTGAGCCCTgc < 2:1538022/150‑1 (MQ=255) aGGTTGGCATTCGGATCATGCGAGCAGGCAGCAAGACCGACGCTCAGGGCCAGCAGGGCGGGAATCATTACGTGTTTGCGCATAGTGTTCATCCTTTGATCGTGTGCGAAGGCTAAGGTTGGCGTCGCACGGCTCACTAAGCGCTGCGCa > 2:665183/1‑150 (MQ=255) aGGTTGGCATTCGGATCATGCGAGCAGGCAGCAAGACCGACGCTCAGGGCCAGCAGGGCGGGAATCATTACGTGTTTGCGCATAGTGTTCATCCTTTGATCGTGTGCGAAGGCTAAGGTTGGCGGGGCAGGGCTCACTGAGCGCTGCGCa < 1:1692055/150‑1 (MQ=255) ggTTGGCATTCGGATCATGCGAGCAGGCAGCAAGACCGACGCTCAGGGCCAGCAGGGCGGGAATCATTACGTGTTTGCGCATAGTGTTCATCCTTTGATCGTGTGCGAAGGCTAAGGTTGGCGGGGCAGGGCTCACTGAGCGCTGCGCAg < 1:1175190/150‑1 (MQ=255) ttCGGATCATGCGAGCAGGCAGCAAGACCGACGCTCAGGGCCAGCAGGGCGGGAATCATTACGTGTTTGCGCATAGTGTTCATCCTTTGATCGTGTGCGAAGGCTAAGGTTGGCGGGGCAGGGCTCACTGAGCGCTGCGCAGGCCTTCCt > 1:184179/1‑150 (MQ=255) ttCGGATCATGCGAGCAGGCAGCAAGACCGACGCTCAGGGCCAGCAGGGCGGGAATCATTACGTGTTTGCGCATAGTGTTCATCCTTTGATCGTGTGCGAAGGCTAAGGTTGGCGGGGCAGGGCTCACTGAGCGCTGCGCAGGCCTTCCt > 2:1070775/1‑150 (MQ=255) ttCGGATCATGCGAGCAGGCAGCAAGACCGACGCTCAGGGCCAGCAGGGCGGGAATCATTACGTGTTTGCGCATAGTGTTCATCCTTTGATCGTGTGCGAAGGCTAAGGTTGGCGGGGCAGGGCTCACTGAGCGCTGCGCAGGCCTTCCt > 1:347074/1‑150 (MQ=255) cATGCGAGCAGGCAGCAAGACCGACGCTCAGGGCCAGCAGGGCGGGAATCATTACGTGTTTGCGCATAGTGTTCATCCTTTGATCGTGTGCGAAGGCTAAGGTTGGCGGGGCAGGGCTCACTGAGCGCTGCGCAGGCCTTCCTCacgtac < 2:1674127/150‑1 (MQ=255) aTGCGAGCAGGCAGCAAGACCGACGCTCAGGGCCAGCAGGGCGGGAATCATTACGTGTTTGCGCATAGTGTTCATCCTTTGATCGTGTGCGAAGGCTAAGGTTGGCGGGGCAGGGCTCACTGAGCGCTGCGCAgg > 2:1401053/1‑135 (MQ=255) aTGCGAGCAGGCAGCAAGACCGACGCTCAGGGCCAGCAGGGCGGGAATCATTACGTGTTTGCGCATAGTGTTCATCCTTTGATCGTGTGCGAAGGCTAAGGTTGGCGGGGCAGGGCTCACTGAGCGCTGCGCAgg < 1:1401053/135‑1 (MQ=255) gAGCAGGCAGCAAGACCGACGCTCAGGGCCAGCAGGGCGGGAATCATTACGTGTTTGCGCATAGTGTTCATCCTTTGATCGTGTGCGAAGGCTAAGGTTGGCGGGGCAGGGCTCACTGAGCGCTGCGCAGGCCTTCCTCACGTACGTCCt > 1:287415/1‑150 (MQ=255) aggcagCAAGACCGACGCTCAGGGCCAGCAGGGCGGGAATCATTACGTGTTTGCGCATAGTGTTCATCCTTTGATCGTGTGCGAAGGCTAAGGTTGGCGGGGCAGGGCTCACTGAGCGCTGCGCAGGCCTTCCTCACGTACGTCCTGAAc < 1:1070775/150‑1 (MQ=255) ggcagCAAGACCGACGCTCAGGGCCAGCAGGGCGGGAATCATTACGTGTTTGCGCATAGTGTTCATCCTTTGATCGTGTGCGAAGGCTAAGGTTGGCGGGGCAGGGCTCACTGAGCGCTGCGCAGGCCTTCCTCACGTACGTCCTGAACg > 2:1690610/1‑150 (MQ=255) gcagcaAGACCGACGCTCAGGGCCAGCAGGGCGGGAATCATTACGTGTTTGCGCATAGTGTTCATCCTTTGATCGTGTGCGAAGGCTAAGGTTGGCGGGGCAGGGCTCACTGAGCGCTGCGCAGGCCTTCCTCACGTACGTCCTGAACGc > 1:2276014/1‑150 (MQ=255) gACCGACGCTCAGGGCCAGCAGGGCGGGAATCATTACGTGTTTGCGCATAGTGTTCATCCTTTGATCGTGTGCGAAGGCTAAGGTTGGCGGGGCAGGGCTCACTGAgc < 2:1677848/108‑1 (MQ=255) gACCGACGCTCAGGGCCAGCAGGGCGGGAATCATTACGTGTTTGCGCATAGTGTTCATCCTTTGATCGTGTGCGAAGGCTAAGGTTGGCGGGGCAGGGCTCACTGAgc > 1:1677848/1‑108 (MQ=255) aCCGACGCTCAGGGCCAGCAGGGCGGGAATCATTACGTGTTTGCGCATAGTGTTCATCCTTTGATCGTGTGCGAAGGCTAAGGTTGGCGGGGCAGGGCTCACTGAGCGCTGCGCAGGCCTTCCTCACGTACGTCCTGAACGCCCTGGCgg < 2:14597/150‑1 (MQ=255) gCTCAGGGCCAGCAGGGCGGGAATCATTACGTGTTTGCGCATAGTGTTCATCCTTTGATCGTGTGCGAAGGCTAAGGTTGGCGGGGCAGTGCTCACTGAGCGCTGCGCAGGCCTTCCTCACGTACGTCCTGAACGCCCTGGCGGGCATcc < 2:549087/150‑1 (MQ=255) tCAGGGCCAGCAGGGCGGGAATCATTACGTGTTTGCGCATAGTGTTCATCCTTTGATCGTGTGCGAAGGCTAAGGTTGGCGGGGCAGGGCTCACTGAGCGCTGCGCAGGCCTTCCTCACGTACGTCCTGAACGCCCTGGCGGGCATCCTg > 1:48899/1‑150 (MQ=255) gggCCAGCAGGGCGGGAATCATTACGTGTTTGCGCATAGTGTTCATCCTTTGATCGTGTGCGAAGGCTAAGGTTGGCGGGGCAGGGCTCACTGAGCGCTGCGCAGGCCTTCCTCACGTACGTCCTGAACGCCCTGGCGGGCATCCTGCAc > 2:2048185/1‑150 (MQ=255) gCCAGCAGGGCGGGAATCATTACGTGTTTGCGCATAGTGTTCATCCTTTGATCGTGTGCGAAGGCTAAGGTTGGCGGGGCAGGGCTCACTGAGCGCTGCGCAGGCCTTCCTCACGTACGTCCTGAACGCCCTGGCGGGCATCCTGCACgg < 2:2276014/150‑1 (MQ=255) ccAGCAGGGCGGGAATCATTACGTGTTTGCGCATAGTGTTCATCCTTTGATCGTGTGCGAAGGCTAAGGTTGGCGGGGCAGGGCTCACTGAGCGCTGCGCAGGCCTTCCTCACGTACGTCCTGAACGCCCTGGCGGGCATCCTGCACGGc < 1:733159/150‑1 (MQ=255) cagcagGGCGGGAATCATTACGTGTTTGCGCATAGTGTTCATCCTTTGATCGTGTGCGAAGGCTAAGGTTGGCGGGGCAGCGCTCAGTGAGCCCTgc > 2:74958/1‑97 (MQ=255) cagcagGGCGGGAATCATTACGTGTTTGCGCATAGTGTTCATCCTTTGATCGTGTGCGAAGGCTAAGGTTGGCGGGGCAGCGCTCAGTGAGCCCTgc < 1:74958/97‑1 (MQ=255) cagcagGGCGGGAATCATTACGTGTTTGCGCATAGTGTTCATCCTTTGATCGTATGCGAAGGCTAAGGTTGGCGGGGCAGGGCTCACTGAGCGCTGCGCAGGCCTTCCTCACGTACGTCCTGAAAGACCTGGCGAGCATCCTGCACGTcc > 2:1123254/1‑150 (MQ=255) gcagGGCGGGAATCATTACGTGTTTGCGCATAGTGTTCATCCTTTGATCGTGTGCGAAGGCTAAGGTTGGCGGGGCAGGGCTCACTGAGCGCTGCGCAgg < 1:2409177/100‑1 (MQ=255) gcagGGCGGGAATCATTACGTGTTTGCGCATAGTGTTCATCCTTTGATCGTGTGCGAAGGCTAAGGTTGGCGGGGCAGGGCTCACTGAGCGCTGCGCAgg > 2:2409177/1‑100 (MQ=255) ggCGGGAATCATTACGTGTTTGCGCATAGTGTTCATCCTTTGATCGTGTGCGAAGGCTAAGGTTGGCGGGGCAGGGCTCACTGAGCGCTGCGCAGGCCTTCCTCACGTACGTCCTGAACGCCCTGGCgg > 1:715280/1‑129 (MQ=255) ggCGGGAATCATTACGTGTTTGCGCATAGTGTTCATCCTTTGATCGTGTGCGAAGGCTAAGGTTGGCGGGGCAGGGCTCACTGAGCGCTGCGCAGGCCTTCCTCACGTACGTCCTGAACGCCCTGGCgg < 2:715280/129‑1 (MQ=255) ggggATCATTACGTGTTTGCGCATAGTGTTCATCCTTTGATCGTGTGCGAAGGCTAAGGTTGGCGGGGCAGGGCTCACTGAGCGCTGCGCAGGCCTTCCTCACGTACGTCCTGAACGCCCTGGCGGGCATCCTGCACGGCCTTCTGGGCt > 2:406750/1‑150 (MQ=255) ggAATCATTACGTGTTTGCGCATAGTGTTCATCCTTTGATCGTGTGCGAAGGCTAAGGTTGGCGGGGCAGGGCTCACTGAGCGCTGCGCAGGCCTTCCTCACGTACGTCCTGAACGCCCTGGCGGGCATCCTGCACGGCCTTCTGGGCtt > 2:1393962/1‑150 (MQ=255) aTCATTACGTGTTTGCGCATAGTGTTCATCCTTTGATCGTGTGCGAAGGCTAAGGTTGGCGGGGCAGGGCTCACTGAGCGCTGCGCAGGCCTTCCTCACGTACGTCCTGAACGCCCTGGCGGGCATCCTGCACGGCCTGCGGGTCTTTgg > 2:1341537/1‑150 (MQ=255) ttACGTGTTTGCGCATAGTGTTCATCCTTTGATCGTGTGCGAAGGCTAAGGTTGGCGGGGCAGGGCTCACTGAGCGCTGCGCAGGCCTTCCTCACGTACGTCCTGAACGCCCTGGCGGGCATCCTGCACGGCCTTCTGGGCTTTGGCTGc > 1:2162823/1‑150 (MQ=255) ttACGTGTTTGCGCATAGTGTTCATCCTTTGATCGTGTGCGAAGGCTAAGGTTGGCGGGGCAGGGCTCACTGAGCGCTGCGCAGGCCTTCCTCACGTACGTCCTGAACGCCCTGGCGGGCATCCTGCACGGCCTTCTGGGCTTTGGCTGc > 2:833892/1‑150 (MQ=255) ttACGTGTTTGCGCATAGTGTTCATCCTTTGATCGTGTGCGAAGGCTAAGGTTGGCGGGGCAGGGCTCACTGAGCGCTGCGCAGGCCTTCCTCACGTACGTCCTGAACGCCCTGGCGGGCATCCTGCACGGCCTTCTGGGCTTTGGCTGc < 1:406750/150‑1 (MQ=255) aCGTGTTTGCGCATAGTGTTCATCCTTTGATCGTGTGCGAAGGCTAAGGTTGGCGGGGCAGGGCTCACTGAGCGCTGCGCAGGCCTTCCTCACGTACGTCCTGAACGCCCTGGCGGGCATCCTGCACGGCCTTCTGGGCTTTGGCTGCCt > 2:2336406/1‑150 (MQ=255) ttGCGCATAGTGTTCATCCTTTGATCGTGTGCGAAGGCTAAGGTTGGCGGGGCAGGGCTCACTGAGCGCTGCGCAGGCCTTCCTCACGTACGTCCTGAACGCCCTGGCGGGCATCCTGCACGGCCTTCTGGGCTTTGGCTGCCTGGGCCt < 1:2336406/150‑1 (MQ=255) tGCGCATAGTGTTCATCCTTTGATCGTGTGCGAAGGCTAAGGTTGGCGGGGCAGGGCTCACTGAGCGCTGCGCAGGCCTTCCTCACGTACGTCCTGAACGCCCTGGCGGGCATCCTGCACGGCCTTCTGGGCTTTGGCTGCCTGGGCCtt < 1:2006548/150‑1 (MQ=255) gcgcATAGTGCTCATCCTTTGATCGTGTGCGAAGGCTAAGGTTGGCGGGGCAGGGCTCACTGAGCGCTGCGCAGGCCTTCCTCACGTACGTCCTGAACGCCCTGGCGGGCATCCTGCACGGCCTTCTgg > 2:464165/1‑129 (MQ=255) gcgcATAGTGCTCATCCTTTGATCGTGTGCGAAGGCTAAGGTTGGCGGGGCAGGGCTCACTGAGCGCTGCGCAGGCCTTCCTCACGTACGTCCTGAACGCCCTGGCGGGCATCCTGCACGGCCTTCTgg < 1:464165/129‑1 (MQ=255) tgtTCATCCTTTGATCGTGTGCGAAGGCTAAGGTTGGCGGGGCAGGGCTCACTGAGCGCTGCGCAGGCCTTCCTCACGTACGTCCTGAACGCCCTGGCGGGCATCCTGCACGGCCTTCTGGGCTTTGGCTGCCTGGGc < 2:318376/138‑1 (MQ=255) tgtTCATCCTTTGATCGTGTGCGAAGGCTAAGGTTGGCGGGGCAGGGCTCACTGAGCGCTGCGCAGGCCTTCCTCACGTACGTCCTGAACGCCCTGGCGGGCATCCTGCACGGCCTTCTGGGCTTTGGCTGCCTGGGc > 1:318376/1‑138 (MQ=255) ttCATCCTTTGATCGTGTGCGAAGGCTAAGGTTGGCGGGGCAGGGCTCACTGAGCGCTGCGCAGGCCTTCCTCACGTACGTCCTGAACGCCCTGGCGGGCATCCTGCACGGCCTTCTGGGCTTTGGCTGCCTGGGCCTTGCGTTCGGCGa > 1:2210491/1‑150 (MQ=255) tCCTTTGATCGTGTGCGAAGGCTAAGGTTGGAGCGCGAGGGGCCTTTGAGCGATACGCAGGTCTTCCTCACGGACGTCCTGAACGCCCTGGCGGGCATCCTGCACGGCCTTCTGGGCTTTGGCTGCCTGGGCCTTGCGTTCGGCGAGGCg > 1:658749/1‑150 (MQ=255) ttGATCGTGTGCGAAGGCTAAGGTTGGCGGGGCAGGGCTCACTGAGCGCTGCGCAGGCCTTCCTCACGTACGTCCTGAACGCCCTGGCGGGCATCCTGCACGGCCTTCTGGGCTTTGGCTGCCTGGGCCTTGCGTTCGGCGAGGCGTGCa < 2:184179/150‑1 (MQ=255) ggCGAAGGCTAAGGTTGGCGGGGCAGGGCTCACTGAGCGCTGCGCAGGCCTTCCTCACGTACGTCCTGAACGCCCTGGCGGGCATCCTGCACGGCCTTCTGGGCTTTGGCTGCCTGGGCCTTGCGTTCGGCGAGGCGTGCATCCCACTCg < 2:985277/149‑1 (MQ=255) cGAAGGCTAAGGTTGGCAAGGCAGGGCTCACTGAGCGCTGCGCAGGCCTTCCTCACGTACGTCCTGAACGCCCTGGCGGGCATCCTGCACGGCCTTCTGGGCTTTGGCTGCCTGGGCCTTGCGTTCGGCGAGGCGTGCATCCCACTCGGc > 2:1234508/1‑150 (MQ=255) gAAGGCTAAGGTTGGCGGGGCAGGGCTCACTGAGCGCTGCGCAGGCCTTCCTCACGTACGTCCTGAACGCCCTGGCGGGCATCCTGCACGGCCTTCTGGGCTTTGGCTGCCTGGGCCTTGCGTTCGGCGAGGCGTGCATCCCACTCGGcc > 1:1576968/1‑150 (MQ=255) aaGGCTAAGGTTGGCGGGGCAGGGCTCACTGAGCGCTGCGCAGGCCTTCCTCACGTACGTCCTGAACGCCCTGGCgg > 1:1568047/1‑77 (MQ=255) aaGGCTAAGGTTGGCGGGGCAGGGCTCACTGAGCGCTGCGCAGGCCTTCCTCACGTACGTCCTGAACGCCCTGGCgg < 2:1568047/77‑1 (MQ=255) aaGGCTAAGGTTGGCGGGGCAGGGCTCACTGAGCGCTGCGCAGGCCTTCCTCACGTACGTCCTGAACGCCCTGGCGGGCATCCTGCACGGCCTTCTGGGCTTTGGCTGCCTGGGCCTTGCGTTCGGCGAGGCGTGCATCCCACTCGGc > 2:2145410/1‑148 (MQ=255) aaGGCTAAGGTTGGCGGGGCAGGGCTCACTGAGCGCTGCGCAGGCCTTCCTCACGTACGTCCTGAACGCCCTGGCGGGCATCCTGCACGGCCTTCTGGGCTTTGGCTGCCTGGGCCTTGCGTTCGGCGAGGCGTGCATCCCACTCGGc < 1:2145410/148‑1 (MQ=255) gCTAAGGTTGGCGGGGCAGGGCTCACTGAGCGCTGCGCAGGCCTTCCTCACGTACGTCCTGAACGCCCTGGCGGGCATCCTGCACGGCCTTCTGGGCTTTGGCTGCCTGGGCCTTGCGTTCGGCGAGGCGTGCATCCCACTCGGCCTGtt < 2:1576968/150‑1 (MQ=255) gCTAAGGTTGGCGGGGCAGGGCTCACTGAGCGCTGCGCAGGCCTTCCTCACGTACGTCCTGAACGCCCTGGCGGGCATCCTGCACGGCCTTCTGGGCTTTGGCTGCCTGGGCCTTGCGTTCGGCGAGGCGTGCATCCCACTCGGCCTGtt < 2:48899/150‑1 (MQ=255) gCTAAGGTTGGCGGGGCAGGGCTCACTGAGCGCTGCGCAGGCCTTCCTCACGTACGTCCTGAACGCCCTGGCGGGCATCCTGCACGGCCTTCTGGGCTTTGGCTGCCTGGGCCTTGCGTTCGGCGAGGCGTGCATCCCACTCGGCCTGtt > 1:817560/1‑150 (MQ=255) gCTAAGGTTGGCGGGGCAGGGCTCACTGAGCGCTGCGCAGGCCTTCCTCACGTACGTCCTGAACGCCCTGGCGGGCATCCTGCACGGCCTTCTGGGCTTTGGCTGCCTGGGCCTTGCGTTCGGCGAGGCGTGCATCCCACTCGGCCTGtt < 1:665183/150‑1 (MQ=255) tAAGGTTGGCGGGGCAGGGCTCACTGAGCGCTGCGCAGGCCTTCCTCACGTACGTCCTGAACGCCCTGGCGGGCATCCTGCACGGCCTTCTGGGCTTTGGCTGCCTGGGCCTTGCGTTCGGCGAGGc < 1:1095500/127‑1 (MQ=255) tAAGGTTGGCGGGGCAGGGCTCACTGAGCGCTGCGCAGGCCTTCCTCACGTACGTCCTGAACGCCCTGGCGGGCATCCTGCACGGCCTTCTGGGCTTTGGCTGCCTGGGCCTTGCGTTCGGCGAGGc > 2:1095500/1‑127 (MQ=255) aaGGTTGGCGGGGCAGGGCTCACTGAGCGCTGCGCAGGCCTTCCTCACGTACGTCCTGAACGCCCTGGCGGGCATCCTGCACGGCCTTCTGGGCTTTGGCTGCCTGGGCCTTGCGTTCGGCGAGGCGTGCATCCCACTCGGCCTGTTggg < 1:1393962/150‑1 (MQ=255) gCGGGGCAGGGCTCACTGAGCGCTGCGCAGGCCTTCCTCACGTACGTCCTGAACGCCCTGGCGGGCATCCTGCACGGCCTTCTGGGCTTTGGCTGCCTGGGCCTTGCGTTCGGCGAGGCGTGCATCCCACTCGGCCTGTTg < 1:204593/141‑1 (MQ=255) gCGGGGCAGGGCTCACTGAGCGCTGCGCAGGCCTTCCTCACGTACGTCCTGAACGCCCTGGCGGGCATCCTGCACGGCCTTCTGGGCTTTGGCTGCCTGGGCCTTGCGTTCGGCGAGGCGTGCATCCCACTCGGCCTGTTg > 2:204593/1‑141 (MQ=255) ctgcgCAGCGCTCAGTGAGCCCTGCGCAGGCCTTCCTCACGTACGTCCTGAACGCCCTGGCGGGCATCCTGCACGGCCTTCTGGGCTTTGGCTGCCTGGGCCTTGCGTTCGGCGAGGCGTGCATCCCACTCGGCCTGTTGGGCCAGTCGc > 2:1933465/5‑150 (MQ=255) cGGGGCAGGGCTCACTGAGCGCTGCGCAGGCCTTCCTCACGTACGTCCTGAACGCCCTGGCGGGCATCCTGCACGGCCTTCTGGGCTTTGGCTGCCTGGGCCTTGCGTTCGGCGAGGCGTGCATCCCACTCGGCCTGTTGGGCCAGTCGc < 2:2162823/150‑1 (MQ=255) ggCAGGGCTCACTGAGCGCTGCGCAGGCNNTCCTCACGTACGTCNTNANCGCCCTGGCGGGCATACTGCACGGCCTTCTGGGCTTTGGCTGCCTGGGCCTTGCGTTCGGCGCGGCGTGCATCCCACTCGGCCTGTTGGGCCAGTCGCTTg > 1:1446412/1‑150 (MQ=255) ggCAGGGCTCACTGAGCGCTGCGCAGGCCTTCCTCACGTACGTCCTGAACGCCCTGGCGGGCATCCTGCACGGCCTTCTGGGCTTTGGCTGCCTGGGCCTTGCGTTCGGCGAGGCGTGCATCCCACTCGGCCTGTTGGGCCAGTCGCTTg < 1:2048185/150‑1 (MQ=255) ggCAGGGCTCACTGAGCGCTGCGCAGGCCTTCCTCACGTACGTCCGGACCGCCCTGGCGGGCATCCTGCACGGCCTTCTGGGCTTTGGCTGCCTGGGCCTTGCGTTCGGCGAGGCGTGCATCCCACTCGGCCTGTTGGGCCAGTCGCTTg < 1:1341537/150‑1 (MQ=255) aGGGCTCACTGAGCGCTGCGCAGGCCTTCCTCACGTACGTCCTGAACGCCCTGGCGGGCATCCTGCACGGCCTTCTGGGCTTTGGCTGCCTGGGCCTTGCGTTCGGCGAGGCGTGCATCCCACTCGGCCTGTTGGGCCAGTCGCTTGGcc > 2:1551277/1‑150 (MQ=255) ggCTCACTGAGCGCTGCGCAGGCCTTCCTCACGTACGTCCTGAACGCCCTGGCGGGCATCCTGCACGGCCTTCTGGGCTTTGGCTGCCTGGGCCTTGCGTTCGGCGAGGCGTGCATCCCACTCGGCCTGTTGGGCCAGTCGCTTGGCCtc < 2:658749/150‑1 (MQ=255) | GTTGGTGCGGGCCGATTCCAGGTTGGCATTCGGATCATGCGAGCAGGCAGCAAGACCGACGCTCAGGGCCAGCAGGGCGGGAATCATTACGTGTTTGCGCATAGTGTTCATCCTTTGATCGTGTGCGAAGGCTAAGGTTGGCGGGGCAGGGCTCACTGAGCGCTGCGCAGGCCTTCCTCACGTACGTCCTGAACGCCCTGGCGGGCATCCTGCACGGCCTTCTGGGCTTTGGCTGCCTGGGCCTTGCGTTCGGCGAGGCGTGCATCCCACTCGGCCTGTTGGGCCAGTCGCTTGGCCTC > NC_002947/1708056‑1708354 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |