| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,718,111 | G→C | 9.0% | L256F (TTG→TTC) | rsmJ → | ribosomal RNA small subunit methyltransferase J |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,718,111 | 0 | G | C | 9.0% | 251.4 / 13.7 | 88 | L256F (TTG→TTC) | rsmJ | ribosomal RNA small subunit methyltransferase J |
| Reads supporting (aligned to +/- strand): ref base G (34/44); new base C (3/5); total (38/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.92e-01 | |||||||||||
CCGGCGCTGCTCGAAGCCGCTCTGGCGCTGGCCAGCCACCGGGTGGTAGTGAAGCGCCCACGCAAGGCACCGATCATCGACGGGCCGAAGCCGAGCCATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTAGGAGCGGCTTTAGCCGCGAACACCGACAACGCCGGTGCCATCCACTGCGTCGTCTCCTGCGCGTTAAACCTGCTCCTACAATGACCTGTTATTTCTGCCAGTAG > NC_002947/1717962‑1718257 | ccGGCGCTGCTCGAAGCCGCTCTGGCGCTGGCCAGCCACCGGGTGGTAGTGAAGCGCCCACGCAAGGCACCGATCATCGACGGGCCGAAGCCGAGCCATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTg > 2:318223/1‑150 (MQ=255)ccGGCGCTGCTCGAAGCCGCTCTGGCGCTGGCCAGCCACCGGGTGGTAGTGAAGCGCCCACGCAAGGCACCGATCATCGACGGGCCGAAGCCGAGCCATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTg > 1:452676/1‑150 (MQ=255) gctgctCGAAGCCGCTCTGGCGCTGGCCAGCCACCGGGTGGTAGTGAAGCGCCCACGCAAGGCACCGATCATCGACGGGCCGAAGCCGAGCCATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTGAAGGc < 1:597510/150‑1 (MQ=255) gctgctCGAAGCCGCTCTGGCGCTGGCCAGCCACCGGGTGGTAGTGAAGCGCCCACGCAAGGCACCGATCATCGACGGGCCGAAGCCGAGCCATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTGAAGGc < 1:2055032/150‑1 (MQ=255) tgctCGAAGCCGCTCTGGCGCTGGCCAGCCACCGGGTGGTAGTGAAGCGCCCACGCAAGGCACCGATCATCGACGGGCCGAAGCCGAGCCATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTGAAGGCCt > 2:2136855/1‑150 (MQ=255) tgctCGAAGCCGCTCTGGCGCTGGCCAGCCACCGGGTGGTAGTGAAGCGCCCACGCAAGGCACCGATCATCGACGGGCCGAAGCCGAGCCATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTGAAGGCCt < 1:682530/150‑1 (MQ=255) ctCGAAGCCGCTCTGGCGCTGGCCAGCCACCGGGTGGTAGTGAAGCGCCCACGCAAGGCACCGATCATCGACGGGCCGAAGCCGAGCCATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTGa < 1:1160674/142‑1 (MQ=255) ctCGAAGCCGCTCTGGCGCTGGCCAGCCACCGGGTGGTAGTGAAGCGCCCACGCAAGGCACCGATCATCGACGGGCCGAAGCCGAGCCATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTGa > 2:1160674/1‑142 (MQ=255) ctCGAAGCCGCTCTGGCGCTGGCCAGCCACCGGGTGGTAGTGAAGCGCCCACGCAAGGCACCGATCATCGACGGGCCGAAGCCGAGCCATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTGAAGGCCTGa < 2:1568413/150‑1 (MQ=255) ctCGAAGCCGCTCTGGCGCTGGCCAGCCACCGGGTGGTAGTGAAGCGCCCACGCAAGGCACCGATCATCGACGGGCCGAAGCCGAGCCATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTGAAGGCCTGa > 2:1245960/1‑150 (MQ=255) ctCGAAGCCGCTCTGGCGCTGGCCAGCCACCGGGTGGTAGTGAAGCGCCCACGCAAGGCACCGATCATCGACGGGCCGAAGCCGAGCCATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTCAAGGCCttc < 2:378951/150‑3 (MQ=255) ctCGAAGCCGCTCTGGCGCTGGCCAGCCACCGGGTGGTAGTGAAGCGCCCACGCAAGGCACCGATCATCGACGGGCCGAAGCCGAGCCATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTCAAGGCCttc < 1:721670/150‑3 (MQ=255) tCGAAGCCGCTCTGGCGCTGGCCAGCCACCGGGTGGTAGTGAAGCGCCCACGCAAGGCACCGATCATCGACGGGCCGAAGCCGAGCCATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTGAAGGCCTGAc > 1:1627999/1‑150 (MQ=255) gAAGCCGCTCTGGCGCTGGCCAGCCACCGGGTGGTAGTGAAGCGCCCACGCAAGGCACCGATCATCGACGGGCCGAAGCCGAGCCATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTCAAGGCCttcttc < 2:613942/150‑6 (MQ=255) gAAGCCGCTCTGGCGCTGGCCAGCCACCGGGTGGTAGTGAAGCGCCCACGCAAGGCACCGATCATCGACGGGCCGAAGCCGAGCCATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCAGAAGAAGGCCTACAACGCCTGcccc > 2:1714577/1‑149 (MQ=255) gCCGCTCTGGCGCTGGCCAGCCACCGGGTGGTAGTGAAGCGCCCACGCAAGGCACCGATCATCGACGGGCCGAAGCCGAGCCATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTGAAGGCCTGACCTGcc < 2:959569/150‑1 (MQ=255) ccGCTCTGGCGCTGGCCAGCCACCGGGTGGTAGTGAAGCGCCCACGCAAGGCACCGATCATCGACGGGCCGAAGCCGAGCCATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTGAAGGCCTGACCTGccc < 1:1029795/150‑1 (MQ=255) tctGGCGCTGGCCAGCCACCGGGTGGTAGTGAAGCGCCCACGCAAGGCACCGATCATCGACGGGCCGAAGCCGAGCCATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTGAAGGCCTGACCTGCCCCTAt < 2:2364252/150‑1 (MQ=255) tctGGCGCTGGCAACCCACCGGGTGGTAGTGAAGCGCCCACGCAAGGCACCGATCATCGACGGGCCGAAGCCGAGCCATAGCCTTGAGGGTAAGTCGAGCCGGTATGACTTCTACCCGAAGAAGGCCTTGAAGGCCTGACCTGCCCCTAt < 1:2298608/150‑1 (MQ=255) tGGCGCTGGCCAGCCACCGGGGGGTAGTGAAGCGCCCACGCAAGGCACCGATCATCGACGGGCGGAAGCCGAGCCATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTGAAGGCCTGACCTGCCCCTATCt < 2:43635/150‑1 (MQ=255) cgcTGGCCAGCCACCGGGTGGTAGTGAAGCGCCCACGCAAGGCACCGATCATCGACGGGCCGAAGCCGAGCCATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTGAAGGCCTGACCTGCCCCTATCTGGc > 2:952685/1‑150 (MQ=255) agccaCCGGGTGGTAGTGAAGCGCCCACGCAAGGCACCGATCATCGACGGGCCGAAGCCGAGCCATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGc > 2:2186920/1‑150 (MQ=255) agccaCCGGGTGGTAGTGAAGCGCCCACCCAAGGCACCGATCATCGACGGGCCGAAGCCGAGCCATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGc > 1:67230/1‑150 (MQ=255) ccaCCGGGTGGTAGTGAAGCGCCCACGCAAGGCATCGATCATCGACGGGCCGAAGCCGAGCCATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCAc > 1:1838000/1‑150 (MQ=255) ccaCCGGGTGGTAGTGAAGCGCCCACGCAAGGCACCGATCATCGACGGGCCGAAGCCGAGCCATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTGAAGGCCTGACCTGCCCCTATCTGGCCg < 2:2221631/142‑1 (MQ=255) ccaCCGGGTGGTAGTGAAGCGCCCACGCAAGGCACCGATCATCGACGGGCCGAAGCCGAGCCATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTGAAGGCCTGACCTGCCCCTATCTGGCCg > 1:2221631/1‑142 (MQ=255) caCCGGGTGGTAGTGAAGCGCCCACGCAAGGCACCGATCATCGACGGGCCGAAGCCGAGCCATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACg < 2:2303731/150‑1 (MQ=255) aCCGGGTGGTAGTGAAGCGCCCACGCAAGGCACCGATCATCGACGGGCCGAAGCCGAGCCATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACGa < 1:2136855/150‑1 (MQ=255) cGGGTGGTAGTGAAGCGCCCACGCAAGGCACCGATCATCGACGGGCCGCAGAGTGTCCATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACGAtt < 2:1873395/150‑1 (MQ=255) cGGGTGGTAGTGAAGCGCCCACGCAAGGCACCGATCATCGACGGGCCGAAGCCGAGCCATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTCAAGGCCttct < 2:1268607/121‑4 (MQ=255) cGGGTGGTAGTGAAGCGCCCACGCAAGGCACCGATCATCGACGGGCAGCAGACGAGCCATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTCAAGGCCttct > 1:1268607/1‑118 (MQ=255) gtggtAGTGAAGCGCCCACGCAAGGCACCGATCATCGACGGGCCGAAGCCGAGCCATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTa < 1:1690744/150‑1 (MQ=255) gtAGTGAAGCGCCCACGCAAGGCACCGATCATCGACGGGCCGAAGCCGAGCCATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTAGGa > 2:1236780/1‑150 (MQ=255) aGTGAAGCGCCCACGCAAGGCACCGATCATCGACGGGCCGAAGCCGAGCCATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTAGGAGc > 2:1103140/1‑150 (MQ=255) taaaGCGCCTACGCAAGGCACCGATTATCGACGGGCCTAAGCCGAGCCATAGCCTTGAGCGTAAGTCGAGCCGGTATGACATCTACCCGAAGAGGGTCTTGAAGGCCTGACCTGCCCGTATCTGGCCGGCTAGCACGATTGTAGGAGCgg < 2:776434/148‑1 (MQ=255) gAAGCGCCCACGCAAGGCACCGATCATCGACGGGCCGAAGCCGAGCCATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTAGGAGCGGc < 1:1532320/150‑1 (MQ=255) gcgcCCACGCAAGGCACCGATCATCGACGGGCCGAAGCCGAGCCATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTAGGAGCGGCt > 2:1772291/1‑148 (MQ=255) gcgcCCACGCAAGGCACCGATCATCGACGGGCCGAAGCCGAGCCATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTAGGAGCGGCt < 1:1772291/148‑1 (MQ=255) gcCCACGCAAGGCACCGATCATCGACGGGCCGAAGCCGAGCCATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTAGGAGCGGCTTTAg > 1:2312730/1‑150 (MQ=255) ccACGCAAGGCACCGATCATCGACGGGCCGAAGCCGAGCCATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTGAAGGCCTGACCTGcc < 1:1158616/108‑1 (MQ=255) ccACGCAAGGCACCGATCATCGACGGGCCGAAGCCGAGCCATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTGAAGGCCTGACCTGcc > 2:1158616/1‑108 (MQ=255) ccACGCAAGGCACCGATCATCGACGGGCCGAAGCCGAGCCATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTAGGAGCGGCTTTAGcc > 2:1502128/1‑150 (MQ=255) gCAAGGCATCGATCATCGACGGGCCGAAGCCGAGCCATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTAGGAGCGGCTAAAGCcgctc < 2:1838000/150‑3 (MQ=255) cAAGGCACCGATCATCGACGGGCCGAAGCCGAGCCATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTAGGAGCGGCTTTAGCCGCGaa < 1:318223/150‑1 (MQ=255) gATCATCGACGGGCCGAAGCCGAGCCATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTAGGAGCGGCTTTAGCCGCGAACACCGACaa > 1:1990279/1‑150 (MQ=255) atcGACGGGCCGAAGCCGAGCCATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTAGGAGCGGCTTTAGCCGCGAACACCGACAACGcc > 1:1572089/1‑150 (MQ=255) aCGGGCCGAAGCAGAGCCATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTAGGAGCGGCTTTAGCCGCGAACACCGACAACGCCGGTg < 1:2297816/150‑1 (MQ=255) gCCGAAGCCGAGCCATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTAGGAACGTCTTTAGCCGCGAACACCGACAACGCCGGTGCCac > 2:1769535/1‑149 (MQ=255) aGCCGAGCCATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTAGGAGCGGCTTTAGCCGCGAACACCGACAACGCCGGTGCCATCCACt < 2:1165768/150‑1 (MQ=255) gAGCCATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTGAAGGCCTGACCTGc < 1:2136005/72‑1 (MQ=255) gAGCCATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTGAAGGCCTGACCTGc > 2:2136005/1‑72 (MQ=255) aGCCATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTAGGAGCGGCTTTAGCCGCGAACACCGACAACGCCGGTGCCATCCACTGcgtc < 1:275069/150‑1 (MQ=255) cATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTAGGAGCGGCTTTAGCCGCGAACACCGACAACGCCGGTGCCATCCACTGCgtcgtc > 2:1725270/1‑150 (MQ=255) cATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTAAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTAGGAGCGGCTTTAGCCGCGAACACCGACAACGCCGGTGCCATCCACTGCgtcgtc > 1:1442832/1‑150 (MQ=255) aTAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTAGGAGCGGCTTTAGCCGCGAACACCGACAACGCCGGTGCCATCCACTGCGTCGtct < 1:1714577/150‑1 (MQ=255) aGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTGGATGTCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTAGGAGCGGCTTTAGCCGCGAACACCGACAACGCCGGTGCCATCCACTGCGTCGTCTcc < 2:442929/150‑1 (MQ=255) gCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTAGGAGCGGCTTTAGCCGCGAACACCGACAACGCCGGTGCCATCCACTGCGTCGTCTCCt > 2:2194193/1‑150 (MQ=255) ttGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTAGGAGCGGCTTTAGCCGCGAACACCGACAACGCCGGTGCCATCCACTGCGTCGTTTCCTgcg > 2:2008764/1‑150 (MQ=255) aGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTAGGAGCGGCTTTAGCCGCGAACACCGACAACGCCGGTGCCATCCACTGCGTCGTCTCCTGCGCGt < 2:2353760/150‑1 (MQ=255) aGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTAGGAGCGGCTTTAGCCGCGAACACCGACAACGCCGGTGCCATCCACTGCGTCGTCTCCTGCGCGt > 2:2292458/1‑150 (MQ=255) ggTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTAGGAGCGGCTTTAGCCGCGAACACCGACAACGCCGGTGCCATCCACTGCGTCGTCTCCTGCGCGTTa > 2:1696843/1‑150 (MQ=255) gTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTAGGAGCGGCTTTAGCCGCGAACACCGACAACGCCGGTGCCATCCACTGCGTCGTCTCCTGCGCGTTAAACCt < 1:2194193/150‑1 (MQ=255) cGAGCCGGTATGACATATACCCGAAGAAGGCCTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTAGGAGCGGCTTTAGCCGAGAACACCGACAACGCCGGTGCCATCCACTGCGTCGTCTCCTGCGCGTTAAACCTGc < 1:1103140/150‑1 (MQ=255) aGCCGGTATGACATCTACCCGAAGAAGGCCTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTAGGAGCGGCTTTAGCCGCGAACACCGACAACGCCGGTGCCATCCACTGCGTCGTCTCCTGCGCGTTAAACCTGCTc < 1:1190590/150‑1 (MQ=255) cGGTATGACATCTACCCGAAGAAGGCCTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTAGGAGCGGCTTTAGCCGCGAACACCGACAACGCCGGTGCCATCCACTGCGTCGTCTCCTGCGCGTTAAACCTGCTCCTa < 2:452676/150‑1 (MQ=255) cGGTATGACATCTACCCGAAGAAGGCCTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTAGGAGCGGCTTTAGCCGCGAACACCGACAACGCCGGTGCCATCCACTGCGTCGTCTCCTGCGCGTTAAACCTGCTCCTa < 1:1725270/150‑1 (MQ=255) gTATGACATCTACCCGAAGAAGGCCTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTAGGAGCGGCTTTAGCCGCGAACACCGACAACGCCGGTGCCATCCACTGCGTCGTCTCCTGCGCGTTAAACCTGCTCCTACa > 2:1282004/1‑150 (MQ=255) aTCTACCCGAAGAAGGCCTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTAGGAGCGGCTTTAGCCGCGAACACCGACAACGCCGGTGCCATCCACTGCGTCGTCTCCTGCGCGTTAAACCTGCTCCTACAATGACCt < 2:1627999/150‑1 (MQ=255) tACCCGAAGAAGGCCTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTAGGAGCGGCTTTAGCCGCGAACACCGACAACGCCGGTGCCATCCACTGCGTCGTCTCCTGCGCGTTAAACCTGCTCCTACAATGACCTGtt < 1:2186920/150‑1 (MQ=255) tACCCGAAGAAGGCCTTAAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTAGGAGCGGCTTTAGCCGCGAACACCGACAACGCCGGTGCCATCCACTGCGTCGTCTCCTGCGCGTTAAACCTGCTCCTACAATGACCTGtt < 2:1442832/150‑1 (MQ=255) ccGAAGAAGGCCTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTAGGAGCGGCTTTAGCCGCGAACACCGACAACGCCGGTGCCATCCACTGCGTCGTCTCCTGCGCGTTAAACCTGCTCCTACAATGACCTGTTAtt > 2:1823895/1‑150 (MQ=255) ccGAAGAAGGCCTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTAGGAGCGGCTTTAGCCGCGAACACCGACAACGCCGGTGCCATCCACTGAGTAGTTGATCTCGCGTTAAACCTGCTCCTACAATGACCTGTTAtt > 2:2372144/1‑150 (MQ=255) cGAAGAAGGCCTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTAGGAGCGGCTTTAGCCGCGAACACCGACAACGCCGGTGCCATCCACTGCGTCGTCTCCTGCGCGTTAAACCTGCTCCTACAATGACCTGTTAttt < 1:1823895/150‑1 (MQ=255) cGAAGAAGGCCTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTAGGAGCGGCTTTAGCCGCGAACACCGACAACGCCGGTGCCATCCACTGCGTCGTCTCCTGCGCGTTAAACCTGCTCCTACAATGACCTGTTAttt > 2:2260184/1‑150 (MQ=255) aggtcagGCCTTCAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTAGGAGCGGCTTTAGCCGCGAACACCGACAACGCCGGTGCCATCCACTGCGTCGTCTCCTGCGCGTTAAACCTGc > 2:2071737/6‑128 (MQ=255) aggtcagGCCTTCAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTAGGAGCGGCTTTAGCCGCGAACACCGACAACGCCGGTGCCATCCACTGCGTCGTCTCCTGCGCGTTAAACCTGc < 1:2071737/123‑1 (MQ=255) aagaagGCCTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCAGGATTGTAGGAGCGGCTTTAGCCGCGAACACCGACAACGCCGGTGCCATCCACTGCGTCGGCTCCTACGCGTTAAACCTGCTCCTACAATGACCTGTTATTTCt < 1:1769535/150‑1 (MQ=255) aagaagGCCTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTAGGAGCGGCTTTAGCCGCGAACACCGACAACGCCGGTGCCATCCACTGCGTCGTCTCCTGCGCGTTAAACCTGCTCCTACAATGACCTGTTATTTCt < 2:67230/150‑1 (MQ=255) agaagGCCTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTAGGAGCGGCTTTAGCCGCGAACACCGACAACGCCGGTGCCATCCACTGCGTCGTCTCCTGCGCGTTAAACCTGCTCCTACAATGACCTGTTATTTCTg < 2:1745427/150‑1 (MQ=255) gaagGCCTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTAGGAGCGGCTTTAGCCGCGAACACCGACAACGCCGGTGCCATCCACTGCGTCGTCTCCTGCGCGTTAAACCTGCTCCTACAATGACCTGTTATTTCTGc > 1:1221757/1‑150 (MQ=255) gaagGCCTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTAGGAGCGGCTTTAGCCGCGAACACCGACAACGCCGGTGCCATCCACTGCGTCGTCTCCTGCGCGTTAAACCTGCTCCTACAATGACCTGTTATTTCTGc < 1:1696843/150‑1 (MQ=255) aagGCCTTGAAGCCCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTAGGAGCGGCTTTAGCCGCGAACACCGACAACGCCGGTGCCATCCACTGCGTCGTCTCCTGCGCGTTAAACCTGCTCCTACAATGACCTGTTATTTCTGcc < 1:165612/150‑1 (MQ=255) agGCCTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTAGGAGCGGCTTTAGCCGCGAACACCGACAACGCCGGTGCCATCCACTGCGTCGTCTCCTGCGCGTTAAACCTGCTCCTACAATGACCTGTTATCTCTGCCa < 2:2312730/150‑1 (MQ=255) agGCCTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTAGGAGCGGCTTTAGCCGCGAACACCGACAACGCCGGTGCCATCCACTGCGTCGTCTCCTGCGCCTTTAGCCTGCTCCTACAATGACCTGTTATTTCTGCCa < 1:2372144/150‑1 (MQ=255) ggCCTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTAGGAGCGGCTTTAGCCGCGAACACCGACAACGCCGGTGCCATCCACTGCGTCGTCTCCTGCGCGTTAAAc > 1:693823/1‑118 (MQ=255) ggCCTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTAGGAGCGGCTTTAGCCGCGAACACCGACAACGCCGGTGCCATCCACTGCGTCGTCTCCTGCGCGTTAAAc < 2:693823/118‑1 (MQ=255) ccTTGAAGGGCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTAGGAGCGGCTTTAGCCGCGAACACCGACAACGCCGGTGCCATCCACTGCGTCGTCTCCTGCGCGTTAAACCTGCTCCTACAATGACCTGTTATTTCTGCCagta > 1:1913661/1‑150 (MQ=255) ccTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTAGGAGCGGCTTTAGCCGCGAACACCGACAACGCCGGTGCCATCCACTGCGTCGTCTCCTGCGCGTTAAACCTGCTCCTACAATGACCTGTTATTTCTGCCagta > 2:29935/1‑150 (MQ=255) cTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTAGGAGCGGCTTTAGCCGCGAACACCGACAACGCCGGTGCCATCCACTGCGTCGTCTCCTGCGCGTTAAACCTGCTCCTACAATGACCTGTTATTTCTGCCagtag > 1:829789/1‑150 (MQ=255) cTTGAAGGCCTGACCTGCCCCTATCTGGACGGGTAGCACGATTGTAGGAGCGGCTTTAGCGGCGAACACCGACAACGCCGGTGCCATCGACTGCGTCGTCTCCTGCGCGTTAAACCTGCTCCTACAATGACCTGTTATTTCTGCCagtag > 1:1918389/1‑150 (MQ=255) | CCGGCGCTGCTCGAAGCCGCTCTGGCGCTGGCCAGCCACCGGGTGGTAGTGAAGCGCCCACGCAAGGCACCGATCATCGACGGGCCGAAGCCGAGCCATAGCCTTGAGGGTAAGTCGAGCCGGTATGACATCTACCCGAAGAAGGCCTTGAAGGCCTGACCTGCCCCTATCTGGCCGGCTAGCACGATTGTAGGAGCGGCTTTAGCCGCGAACACCGACAACGCCGGTGCCATCCACTGCGTCGTCTCCTGCGCGTTAAACCTGCTCCTACAATGACCTGTTATTTCTGCCAGTAG > NC_002947/1717962‑1718257 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |