| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,810,378 | C→A | 10.8% | intergenic (+97/‑72) | eno → / → ftsB | enolase/cell division protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,810,378 | 0 | C | A | 10.8% | 360.4 / 22.6 | 120 | intergenic (+97/‑72) | eno/ftsB | enolase/cell division protein |
| Reads supporting (aligned to +/- strand): ref base C (51/56); new base A (8/5); total (59/61) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.91e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.68e-01 | |||||||||||
Only 100 of 121 total aligned reads displayed.
AGCAACTGGGCGCCAAAGCGGTTTACCGCGGTCGTGCCGAGTTTCGCGGCTAAGCAAGAGATGGTAAAAAGGCAGCAGCCGGAGTTGTAGGAACGTTCGTACTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACGTGATGCGCAGTCCCTATTGGTTGTTCCTCGTTCTGCTCTTGCTGTTGGGTGGCCTGCAGTACCGCCTGTGGGTGGGTAA > NC_002947/1810229‑1810526 | gCAACTGGGCGCCAAAGCGGTTTACCGCGGTCGTGCCGAGTTTCGCGGCTAAGCAAGAGATGGTAAAAAGGCAGCAGCCGGAGTTGTAGGAACGTTCGTACTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCg < 1:380666/150‑1 (MQ=255) aaCTGGGCGCCAAAGCGGTTTACCGCGGTCGTGCCGAGTTTCGCGGCTAAGCAAGAGATGGTAAAAAGGCAGCAGCCGGAGTTGTACGAACGTCAGAACAAAAATTTCCTAGCAACTAACGTGCTTCTGGCGTCGATGCCTGGCCTCGGc > 2:264791/1‑150 (MQ=255) tGGGCGCCAAAGCGGTTTACCGCGGTCGTGCCGAGTTTCGCGGCTAAGCAAGAGATGGTAAAAAGGCAGCAGCCGGAGTTGTAGGAACGTTCGTACTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACTAAGCCTGGCCTCGGCCAg > 1:125132/1‑150 (MQ=255) ccAAAGCGGTTTACCGCGGTCGTGCCGAGTTTCGCGGCTAAGCAAGAGATGGTAAAAAGGCAGCAGCCGGAGTTGTAGGAACGTTCGTACTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCg < 1:938694/150‑1 (MQ=255) aaGCGGTTTACCGCGGTCGTGCCGAGTTTCGCGGCTAAGCAAGAGATGGTAAAAAGGCAGCAGCCGGAGTTGTAGGAACGTTCGTACTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGc > 2:1979881/1‑150 (MQ=255) cGGTTTACCGCGGTCGTGCCGAGTTTCGCGGCTAAGCAAGAGATGGTAAAAAGGCAGCAGCCGGAGTTGTAGGAACTTTCGTACTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCGAGGCCAGGCT‑TCGtcgaca < 1:898184/150‑6 (MQ=255) ggTTTACCGCGGTCGTGCCGAGTTTCGCGGCTAAGCAAGAGATGGTAAAAAGGCAGCAGCCGGAGTTGTAGGAACGTTCGTACTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTAtt < 1:1767556/150‑1 (MQ=255) ttACCGCGGTCGTGCCGAGTTTCGCGGCTAAGCAAGAGATGGTAAAAAGGCAGCAGCCGGAGTTGTAGGAACGTTCGTACTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGa < 2:1880922/150‑1 (MQ=255) ttACCGCGGTCGTGCCGAGTTTCGCGGCTAAGCAAGAGATGGTAAAAAGGCAGCAGCCGGAGTTGTAGGAACGTTCGTACTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGa < 2:1262899/150‑1 (MQ=255) ttgcgcgGTCGTGCCGAGTCATGCTGCGAAGCAAGATATTGTAAAAAGGCAGCAGCCGGAGTTGTAGGAACGTTCGTACTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAg < 2:1122557/147‑1 (MQ=255) tACCGCGGTCGTGCCGAGTTTCGCGGCTAAGCAAGAGATGGTAAAAAGGCAGCAGCCGGAGTTGTAGGAACGTTCGTACTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAg < 2:1363017/150‑1 (MQ=255) cgcgGTCGTGCCGAGTTTCGCGGCTAAGCGAGAGATGGTAAAAAGGCAGCAGCCGGAGTTGTAGGAACGTTCGTACTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGcc > 2:664097/1‑150 (MQ=255) tCGTGCCGAGTTTCGCGGCTAAGCAAGAGATGGTAAAAAGGCAGCAGCCGGAGTTGTAGGAACGTTCGTACTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGaa > 2:2121472/1‑150 (MQ=255) cGAGTTTCGCGGCTAAGCAAGAGATGGTAAAAAGGCAGCAGCCGGAGTTGTAGGAACGTTCGTACTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGAC‑TCGTGTTATTCGAGGCCCCGAAGTAACa > 1:1810559/1‑150 (MQ=255) gAGTTTCGCGGCTAAGCAAGAGATGGTAAAAAGGCAGCAGCCGGAGTTGTAGGAACGTTCGTACTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACaa > 1:2004381/1‑150 (MQ=255) gAGTTTCGCGGCTAAGCAAGAGATGGTAAAAAGGCAGCAGCCGGAGTTGTAGGAACGTTCGTACTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACaa < 1:1636566/150‑1 (MQ=255) gAGTTTCGCGGCTAAGCAAGAGATGGTAAAAAGACAGCAGCCGGAGTTGTAGGAACGTTCGTACTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACaa > 1:2380740/1‑150 (MQ=255) tttCGCGGCTAAGCAAGAGATGGTAAAAAGGCAGCAGCCGGAGTTGTAGGAACGTTCGTACTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCGAGGCCAGGCT‑TCGt < 2:37807/122‑1 (MQ=255) tttCGCGGCTAAGCAAGAGATGGTAAAAAGGCAGCAGCCGGAGTTGTAGGAACGTTCGTACTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCGAGGCCAGGCT‑TCGt > 1:37807/1‑122 (MQ=255) cgctGCTAAGCAAGAGATGGTAAAAAGGCAGCAGCCGGAGTTGTAGGAACGTTCGTACTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGCCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTAcgc < 1:858494/150‑1 (MQ=255) ggCTAAGCAAGAGATGGTAAAAAGGCAGCAGCCGGAGTTGTAGGAACGTTCGTACTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGc < 2:2004381/150‑1 (MQ=255) agcgagagATGGTAAAAAGGCAGCAGCCGGAGTTGTAGGAACGTTCGTACTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCt < 1:664097/146‑1 (MQ=255) gCAAGAGATGGTAAAAAGGCAGCAGCCGGAGTTGTAGGAACGTTCGTACTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCtt < 1:1901356/150‑1 (MQ=255) cAAGAGATGGTAAAAAGGCAGCAGCCGGAGTTGTAGGAACGTTCGTACTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAAc < 2:1007339/132‑1 (MQ=255) cAAGAGATGGTAAAAAGGCAGCAGCCGGAGTTGTAGGAACGTTCGTACTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAAc > 1:1007339/1‑132 (MQ=255) aaGAGATGGTAAAAAGGCAGCAGCCGGAGTTGTAGGAACGTTCGTACTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAgg < 2:1954021/119‑1 (MQ=255) gTAAAAAGGCAGCAGCCGGAGTTGTAGGAACGTTCGTACTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTgg > 2:2063599/1‑150 (MQ=255) gTAAAAAGGCAGCAGCCGGAGTTGTAGGAACGTTCGTACTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTgg > 1:302185/1‑150 (MQ=255) aaGGCAGCAGCCGGAGTTGTAGGAACGTTCGTACTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGtcgac < 2:1648611/99‑5 (MQ=255) aaGGCAGCAGCCGGAGTTGTAGGAACGTTCGTACTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAAc < 2:1861289/150‑1 (MQ=255) aGGCAGCAGCCGGAGTTGTAGGAACGTTCGTACTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACg < 1:1262306/150‑1 (MQ=255) aGGCAGCAGCCGGAGTTGTAGGAACGTTCGTACTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACg < 1:960462/150‑1 (MQ=255) agcagcCGGAGTTGTAGGAACGTTCGTACTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCa < 1:1329583/82‑1 (MQ=255) agcagcCGGAGTTGTAGGAACGTTCGTACTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCa > 2:1329583/1‑82 (MQ=255) agcagcCGGAGTTGTAGGAACGTTCGTACTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACGTGAt > 2:1162381/1‑150 (MQ=255) ttGTAGGAACGTTCGTACTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAg > 2:1372375/1‑72 (MQ=255) tAGGAACGTTCGTACTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAAc > 2:3692/1‑131 (MQ=255) tAGGAACGTTCGTACTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAAc < 1:3692/131‑1 (MQ=255) tAGGAACGTTCGTACTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACGTGATGCGCAGTCCCTAtt < 1:2063599/150‑1 (MQ=255) tAGGAACGTTCGTACTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCGAGGCCAGGc < 2:1433129/71‑1 (MQ=255) tAGGAACGTTCGTACTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCGAGGCCAGGc > 1:1433129/1‑71 (MQ=255) aGGAACGTTCGTACTGAACTTTCCTACGTACTAACGGGTTTCTGTAGACGAAGCCTGGCCTCGGCCA‑ACTGGCTTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACGTGATGCGCAGTCCCTATTg < 1:1250648/150‑1 (MQ=255) ggAACGTTCGTACTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCTCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACGTGATGCGCa < 1:2251203/139‑1 (MQ=255) ggAACGTTCGTACTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACaa < 2:494806/99‑1 (MQ=255) ggAACGTTCGTACTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACaa > 1:494806/1‑99 (MQ=255) ggAACGTTCGTACTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAAc < 1:609711/120‑1 (MQ=255) ggAACGTTCGTACTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAAc > 2:609711/1‑120 (MQ=255) ggAACGTTCGTACTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACGTGATGCGCa > 2:2251203/1‑139 (MQ=255) aCGTTCGTACTGAACTTTCCTACGTACTAACGGGTTTAAGTGGATGAACCTTGTCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTGCGCGGCAGCCTTTTTAACCTGGATAACGTGATGCGCAGTCCCTATTGgttg > 1:1253030/1‑150 (MQ=255) cGTTCGTACTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACGTGATGCGCAGTCCCTATTGgttgt < 1:1404658/150‑1 (MQ=255) tCGTACTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACGTGATGCGCAGTCCCTATTgg < 1:413493/143‑1 (MQ=255) tCGTACTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACGTGATGCGCAGTCCCTATTgg > 2:413493/1‑143 (MQ=255) gTACTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACGTGATGCGCAGTCCCTATTGGTTGTTCCTc > 1:2091031/1‑150 (MQ=255) aCTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCCGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACGTGATGCGCAGTCCCTATTGGTTGTTCCTCGt > 2:311665/1‑150 (MQ=255) cTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTATCCTTGTTCACGTGATGCGTAGTCCCTATTGGTTGTTCCTCGtt > 2:761441/1‑150 (MQ=255) cTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACGTGATGCGCAGTCCCTATTGGTTGTTCCTCGtt > 1:786905/1‑150 (MQ=255) tGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACGTGATGCGCAGTCCCTATTGGTTGTTCCTCGTTc > 1:78814/1‑150 (MQ=255) aaCTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACGTGATGCGCAGTCCCTATTGGTTGTTCCTCGTTCTg > 2:2167986/1‑150 (MQ=255) tttCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTTCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACGTGATGCGCAGTCCCTATTGGTTGTTCCTCGTTCTGctc > 2:597586/1‑150 (MQ=255) tttCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAAc > 2:647104/1‑79 (MQ=255) tACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACGTGATGCGCAGTCCCTATTGGTTGTTc < 1:300219/133‑1 (MQ=255) tACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACGTGATGCGCAGTCCCTATTGGTTGTTc > 2:300219/1‑133 (MQ=255) tACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACGTGATGCGCAGTCCCTATTGGTTGTTCCTCGTTCTGCTCTTGCTGTTg < 2:78814/150‑1 (MQ=255) tAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACGTGATGCGCAGTcc < 1:1494995/113‑1 (MQ=255) tAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACGTGATGCGCAGTcc > 2:1494995/1‑113 (MQ=255) tAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACGTGATGCGCAGTCCCTATTGgttg < 2:1661378/123‑1 (MQ=255) tAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACGTGATGCGCAGTCCCTATTGgttg > 1:1661378/1‑123 (MQ=255) tAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACGTGATGCGCAGTCCCTATTGGTTGTTCCTCGTTCTGCTCTTGc < 1:100646/142‑1 (MQ=255) tAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACGTGATGCGCAGTCCCTATTGGTTGTTCCTCGTTCTGCTCTTGCTGTTGGGt > 1:116149/1‑150 (MQ=255) aCGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACGTGATGCGCAGTCCCTATTGGTTGTTCCTCGTTCTGCTCTTGCTGTTGGGTgg > 2:2259158/1‑150 (MQ=255) aCGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACGTGATGCGCAGTCCCTATTGGTTGTTCCTCGTTCTGCTCTTGCTGTTGGGTgg > 2:2105487/1‑150 (MQ=255) cGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACGTGATGCGCAGTCCCTATTGGTTGTTCCTCGTTCTGCTCTTGCTGTTGGGTGGc > 2:249250/1‑150 (MQ=255) cGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACGTGATGCGCAGTCCCTATTGGTTGTTCCTCGTTCTGCTCTTGCTGTTGGGTGGc < 1:1979881/150‑1 (MQ=255) gggTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACGTGATGCGCAGTCCCTATTGGTTGTTCCTCGTTCTGCTCTTGCTGTTGGGTGGcc > 1:1927020/1‑150 (MQ=255) ggTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACGTGATGCGCAGTCCCTATTGGTTGTTCCTCGTTCTGCTCTTGCTGtt < 1:2197550/141‑1 (MQ=255) ggTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACGTGATGCGCAGTCCCTATTGGTTGTTCCTCGTTCTGCTCTTGCTGtt > 2:2197550/1‑141 (MQ=255) gTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACGTGATGCGCAGTCCCTATTGGTTGTTCCTCGTTCTGCTCTTGCTGTTGGGTGGCCTg < 1:2105487/150‑1 (MQ=255) ttCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACGTGATGCGCAGTCCCTATTGGTTGTTCCTCGTTCTGCTCTTGCTGTTGGGTGGCCTGCa < 1:2167986/150‑1 (MQ=255) tGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAAc < 2:1038568/56‑1 (MQ=255) tGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAAc > 1:1038568/1‑56 (MQ=255) tGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACGTGATGCGCAGTCCCTATTGGTTGTTc > 1:1689891/1‑115 (MQ=255) tGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACGTGATGCGCAGTCCCTATTGGTTGTTc < 2:1689891/115‑1 (MQ=255) gacgaAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACGTGATGCGCAGTCCCTATTGGTTGTTCCTCGTTCTGCTCTTGCTGTTGGGTGGCCTGCAGTACCGc > 1:18709/1‑150 (MQ=255) gacgaAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACGTGATGCGCAGTCCCTATTGGTTGTTCCTCGTTCTGCTCTTGCTGTTGGGTGGCCTGCAGTACCGc < 1:746266/150‑1 (MQ=255) acgaAGCCTGGCCGAGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACGTGATGCGCAGTCCCTAtt > 2:647137/1‑102 (MQ=255) acgaAGCCTGGCCGAGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACGTGATGCGCAGTCCCTAtt < 1:647137/102‑1 (MQ=255) acgaAGCCTGGCCGAGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACGTGATGCGCAGTCCCTATTGGTTGTTCCTCGTTCTGCTCTTGCTGTTGGGTGGCCTGCAGTACCGcc > 1:1891222/1‑150 (MQ=255) acgaAGCCTGGCCGAGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACGTGATGCGCAGTCCCTATTGGTTGTTCCTCGTTCTGCTCTTGCTGTTGGGTGGCCTGCAGTACCGcc > 2:470963/1‑150 (MQ=255) acgaAGCCTGGCCGAGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACGTGATGCGCAGTCCCTATTGGTTGTTCCTCGTTCTGCTCTTGCTGTTGGGTGGCCTGCAGTACCGcc > 1:1544866/1‑150 (MQ=255) gaAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACGTGATGCGCAGTCCCTATTGGTTGTTCCTCGTTCTGCTCTTGCTGTTGGGTGGCCTGCAGTACCGCCtg > 1:1100184/1‑150 (MQ=255) gaAGCCTGGCCGAGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACGTGATGCGCAGTCCCTATTGGTTGTTCCTCGtt > 2:18870/1‑114 (MQ=255) ggCCTGGCCCCGGCCATGCT‑TCGTGCTATTCGAGGCTCGGAAGTAACAAGTACGCGGCAGTCTTTTTAACCTGGATAACGTGATGCGCAGTCCCTATTGGTTGTTCCTCGTTCTGCTCTTGCTGTTGGGTGGCCTGCAGTACCGCCtgtg < 2:125132/149‑1 (MQ=255) cTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACGTGATGCGCAGTCCCTATTgg < 2:947162/97‑1 (MQ=255) cTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACGTGATGCGCAGTCCCTATTgg > 1:947162/1‑97 (MQ=255) cTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACGTGATGCGCAGTCCCTATTGGTTGTTTCGCGTTCTGCTCTTGCTGTTGTGTGGCCTGCAGTACCGCCTgtgggt > 2:1932584/1‑150 (MQ=255) cTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACGTGATGCGCAGTCCCTATTGGTTGTTCCTCGTTCTGCTCTTGCTGTTGGGTGGCCTGCAGTACCGCCTgtgggt < 2:302185/150‑1 (MQ=255) cTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACGTGATGCGCAGTCCCTATTGGTTGTTCCTCGTTCTGCTCTTGCTGTTGGGTGGCCTGCAGTACCGCCTgtgggt < 1:2128446/150‑1 (MQ=255) tGGCCTCGGCCAGGCT‑TCGTTCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACGTGATGCGCAGTCCCTATTGGTTGTTCCTCGTTCTGCTCTTGCTGTTGGGTGGCCTGCAGTACCGCCTgtgggtg < 1:597586/150‑1 (MQ=255) ggCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGATCATACAAGTACGCGGCAGCCTTTTTAACCTGGATAACGTGATGCGCAGTCCCTATTGGTTGTTCCTCGTTCTGCTCTTGCTGTTGGGTGGCCTGCAGTACCGCCTgtgggtgg < 1:1932584/150‑1 (MQ=255) tCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACGTGATGCGCAGTCCCTATTGGTTGTTCCTCGTTCTGCTCTTGCTGTTGGGTGGCCTGCAGTACCGCCTGTGGGTGGGTaa > 2:787623/1‑150 (MQ=255) | AGCAACTGGGCGCCAAAGCGGTTTACCGCGGTCGTGCCGAGTTTCGCGGCTAAGCAAGAGATGGTAAAAAGGCAGCAGCCGGAGTTGTAGGAACGTTCGTACTGAACTTTCCTACGTACTAACGGGTTTCTGTCGACGAAGCCTGGCCTCGGCCAGGCT‑TCGTGCTATTCGAGGCCCCGAAGTAACAAGTACGCGGCAGCCTTTTTAACCTGGATAACGTGATGCGCAGTCCCTATTGGTTGTTCCTCGTTCTGCTCTTGCTGTTGGGTGGCCTGCAGTACCGCCTGTGGGTGGGTAA > NC_002947/1810229‑1810526 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |