| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,831,822 | T→C | 9.6% | L220P (CTG→CCG) | yfiP → | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,831,822 | 0 | T | C | 9.6% | 291.1 / 15.4 | 104 | L220P (CTG→CCG) | yfiP | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (43/51); new base C (5/5); total (48/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.59e-01 | |||||||||||
Only 100 of 106 total aligned reads displayed.
CGGCGCTCCAAGCGCGATGATCATTTCTGTACGGCAGAAGTTGCGGCGATGTGCCTGGACCTTGCTGGCGATGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGCACAACCCCTGCTTTGGTTCATAATGACGGAGCTGGCAGCCAGGGTGGGCGAGACGGCAGGGCGATTGGCTTGATCTCCC > NC_002947/1831677‑1831963 | cggcgCTCCAAGCGCGATGATCATTTCTGTACGGCAGAAGTTGCGGCGATGTGCCTGGACCTTGCTGGCGATGGATGCGCTTCGCAGGCGCGTGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCg < 1:1497880/150‑1 (MQ=255) aaGCGCGATGATCATTTCTGTACGGCAGAAGTTGCGGCGATGTGCCTGGACCTTGCTGGCGATGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAg < 1:199797/150‑1 (MQ=255) aaGCGCGATGATCATTTCTGTACGGCAGAAGTTGCGGCGATGTGCCTGGACCTTGCTGGCGATGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAg > 2:557680/1‑150 (MQ=255) cgcgATGATCATTTCTGTACGGCAGAAGTTGCGGCGATGTGCCTGGACCTTGCTGGCGATGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAg > 1:367241/1‑150 (MQ=255) cgATGATCATTCTTGTACGGCAGAAGTTGCGGCGATGTGCCTGGACCTTCATGGAGATGGGTGAGCGCAGCTGGGGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGga < 1:892224/150‑1 (MQ=255) gatgatCATTTCTGTACGGCAGAAGTTGCGGCGATGTGCCTGGACCTTGCTGGCGATGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAggcc > 1:144261/1‑148 (MQ=255) cgaccATTTCTGTACGGCAGAAGTTGCGGCGATGTGCCTGGACCTTGCTGGCGATGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGgacga > 2:705567/5‑150 (MQ=255) aTTTCTGTACGGCAGAAGTTGCGGCGATGTGCCTGGACCTTGCTGGCGATGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGAcaccc > 2:1155826/1‑150 (MQ=255) aTTTCTGTACGGCAGAAGTTGCGGCGATGTGCCTGGACCTTGCTGGCGATGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGAcaccc > 2:1155601/1‑150 (MQ=255) tGTACGGCAGAAGTTGCGGCGATGTGCCTGGACCTTGCTGGCGATGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAg > 1:618253/1‑150 (MQ=255) tACGGCAGAAGTTGCGGCGATGTGCCTGGACCTTGCTGGCGATGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCcgcg > 2:1026044/1‑150 (MQ=255) aCGGCAGAAGTTGCGGCGATGTGCCTGGACCTTGCTGGCGATGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGt < 1:703812/150‑1 (MQ=255) cGGCAGAAGTTGCGGCGATGTGCCTGGACCTTGCTGGCGATGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCAGCTCGACATGCAGCACGCCGCCCTTCAGCttt < 2:1955939/150‑1 (MQ=255) ggCAGAAGTTGCGGCGATGTGCCTGGACCTTGCTGGCGATGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGttt < 1:705567/150‑1 (MQ=255) ggCAGAAGTTGCGGCGATGTGCCTGGACCTTGCTGGCGATGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGttt < 1:798239/150‑1 (MQ=255) ggCAGAAGTTGCGGCGATGTGCCTGGACCTTGCTGGCGATGG‑CAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTg < 2:2231535/150‑1 (MQ=255) gCAGAAGTTGCGGCGATGTGCCTGGACCTTGCTGGCGATGTCCANGCTTAGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGCCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTg > 1:2109416/1‑150 (MQ=255) gcggcgATGTGCCTGGACCTTGCTGGCGATGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCATTGGCATCCCtgc > 2:1340085/1‑148 (MQ=255) cggcgATGTGCCTGGACCTTGCTGGCGATGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTcc < 1:557680/150‑1 (MQ=255) cggcgATGTGCCTGGACCTTGCTGGCGATGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTcc < 2:1470035/150‑1 (MQ=255) gATGTGCCTGGACCTTGCTGGCGATGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCtata < 1:200631/150‑1 (MQ=255) gATGTGCCTGGACCTTGCTGGCGATGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCtata < 1:2165198/150‑1 (MQ=255) cTGGACCTTGCTGGCGATGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAg < 2:144261/150‑1 (MQ=255) tGGACCTTGCTGGCGATGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAgg > 1:2346819/1‑150 (MQ=255) gggACCTTGCTGGCGATTGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAgg < 2:2109416/149‑1 (MQ=255) aCCTTGCTGGCGATGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGCCGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGc > 1:984323/1‑150 (MQ=255) ccTTGCTGGCGATGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGca < 2:618253/150‑1 (MQ=255) cTTGCTGGCGATGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGcac < 1:1316337/150‑1 (MQ=255) cTGGCGATGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGCACAAcc < 2:367241/150‑1 (MQ=255) tGGCGATGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGttt > 1:397150/1‑117 (MQ=255) tGGCGATGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGttt < 2:397150/117‑1 (MQ=255) tGGCGAGGGCCAGGCTTTGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTGAAGCGGTGACTGAGTGCCG‑TGCTTGACGAGCAGGACGACACACACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGCACAAccc < 2:1891829/150‑1 (MQ=255) gATGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGCACAACCCCTGc > 1:1999906/1‑150 (MQ=255) tGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTTTAGTCCAAGGGGCACAACCCCTGCtt < 1:1155601/150‑1 (MQ=255) tGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGCACAACCCCTGCtt < 1:1155826/150‑1 (MQ=255) gCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGttt > 2:579543/1‑109 (MQ=255) gCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGttt < 1:579543/109‑1 (MQ=255) ccAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGCACAACCCCTGCtt < 1:504506/147‑1 (MQ=255) ccAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGCACAACCCCTGCTTTgg < 1:1095541/150‑1 (MQ=255) cAGGCTTCGCAGGCGCTGTATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGgacg > 2:2267292/1‑91 (MQ=255) cAGGCTTCGCAGGCGCTGTATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGgacg < 1:2267292/91‑1 (MQ=255) cAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGCACAACCCCTGCTTTGGt > 2:611910/1‑150 (MQ=255) cAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGCACAACCCCTGCTTTGGt < 2:247262/150‑1 (MQ=255) cAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGCACAACCCCTGCTTTGGt < 1:1981286/150‑1 (MQ=255) cAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGCACAACCCCTGCTTTGGt > 2:780466/1‑150 (MQ=255) aGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGgac < 1:145966/89‑1 (MQ=255) aGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGgac > 2:145966/1‑89 (MQ=255) gCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGCACAACCCCTGCTTTGGTTCa < 2:984323/150‑1 (MQ=255) gCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGCACAACCCCTGCTTTGGTTCa < 1:1547602/150‑1 (MQ=255) gCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAgggg < 1:116376/124‑1 (MQ=255) gCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAgggg > 2:116376/1‑124 (MQ=255) aGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCa > 2:1001417/1‑76 (MQ=255) aGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCa < 1:1001417/76‑1 (MQ=255) ggATGCCCATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGCACAACCCCTGc > 1:2116617/1‑127 (MQ=255) ggATGCCCATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGCACAACCCCTGc < 2:2116617/127‑1 (MQ=255) gATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGCACAACCCCTGCTTTGGTTCATAATGACGGAGCTgg > 1:116646/1‑150 (MQ=255) tGCCTATCTGGATGTGTTCAGCCTGCATTCCATG‑CGCGGCGAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGCACAACCCCTGCTTTGGTTCATAATGACGGAGCTGGCa < 2:1999906/150‑1 (MQ=255) tGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAgg > 1:1676995/1‑110 (MQ=255) tGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAgg < 2:1676995/110‑1 (MQ=255) tGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGCATAACCCCTGCTTTgg > 2:1185841/1‑129 (MQ=255) tGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGCATAACCCCTGCTTTgg < 1:1185841/129‑1 (MQ=255) cTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGCACAACCCCTGCTTTGGTTCATAATGACGGAGCTGGCAGcc > 2:1315973/1‑150 (MQ=255) cTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGCACAACCCCTGCTTTGGTTCATAATGACGGAGCTGGCAGcc > 1:2313058/1‑150 (MQ=255) cTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCAGCCGCCGCTTg > 1:1835850/1‑56 (MQ=38) tCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGCACAACCCCTGCTTTGGTTCATAATGACGGAGCTGGCAGCCAgg > 1:2180150/1‑150 (MQ=255) tCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGCACAACCCCTGCTTTGGTTCATAATGACGGAGCTGGCAGCCAgg > 2:1881634/1‑150 (MQ=255) cTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCtata > 2:315787/1‑95 (MQ=255) cTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCtata < 1:315787/95‑1 (MQ=255) gATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGCACAACCCCTGCTTTGGTTCATAATGACGGAGCTGGCAGCCAGGGTgg < 1:1315973/150‑1 (MQ=255) gATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGCACAACCCCTGCTTTGGTTCATAATGACGGAGCTGGCAGCCAGGGTgg < 2:604240/150‑1 (MQ=255) aTGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGCACAACCCCTGCTTTGGTTCATAATGACGGAGCTGGCAGCCAGGGTggg < 1:1340085/150‑1 (MQ=255) tgtgTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGATTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGCACAACCCCTGCTTTGGTTCATAATGACGGAGCTGGCAGCCAGGGTGGGc < 2:924237/150‑1 (MQ=255) gtTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGCACAACCCCTGCTTTGGtt < 2:1881611/116‑1 (MQ=255) gtTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGCACAACCCCTGCTTTGGtt > 1:1881611/1‑116 (MQ=255) gtTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGCACAACCCCTGCTTTGGTTCATAATGACGGAGCTGGCAGCCAGGGTGGGCgag > 2:2383438/1‑150 (MQ=255) ttCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGATTTTGCATACCTTCCTATAGTCCAAGGGGCACAACCCCTGCTTTGGTTCATAATGACGGACCTGGCAGCCAGGGTGGGCgaga > 2:159214/1‑150 (MQ=255) cAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGCACAACCCCTGCTTTGGTTCATAATGACGGAGCTGGCAGCCAGGGTGGGCGAGACg > 2:916134/1‑150 (MQ=255) ccTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGCACAACCCCTGCTTTGGTTCATAATGACg > 2:329551/1‑120 (MQ=255) ccTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGCACAACCCCTGCTTTGGTTCATAATGACGGAGCTGGCAGCCAGGGTGGGCGAGACGGCa > 2:1167506/1‑150 (MQ=255) ccTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGCACAACCCCTGCTTTGGTTCATAATGACGGAGCTGGCAGCCAGGGTGGGCGAGACGGCa < 1:2383438/150‑1 (MQ=255) ccTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGCACAACCCCTGCTTTGGTTCATAATGACGGAGCTGGCAGCCAGGGTGGGCGAGACGGCAGGGCGATTg < 2:1252682/150‑1 (MQ=255) g‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGCACAACCCCTGCTTTGGTTCATAATGACGGAGCTGGCAGCCAGGGTGGGCgt < 2:1649009/131‑2 (MQ=255) g‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGCACAACCCCTGCTTTGGTTCATAATGACGGAGCTGGCAGCCAGGGTGGGCga > 1:1649009/1‑131 (MQ=255) g‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGCACAACCCCTGCTTTGGTTCATAATGACGGAGCTGGCAGCCAGGGTGGGCGAGACGGCAGGGCGATTGGCt < 1:1546285/150‑1 (MQ=255) aGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGCACAACCCCTGCTTTGGTTCATAATGACGGAGCTGGCAGCCAGGGTGGGCGAGACGGCAGGGCGATTGGCtt < 1:916134/150‑1 (MQ=255) tcgtcAAGCGGCAGCCGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGCACAACCCCTGCTTTGGTTCATAATGACGGAGCTGGCAGCCAg > 1:940285/5‑120 (MQ=255) tcgtcAAGCGGCAGCCGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGCACAACCCCTGCTTTGGTTCATAATGACGGAGCTGGCAGCCAg < 2:940285/116‑1 (MQ=255) ggCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGc < 2:638985/52‑1 (MQ=255) ggCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGc > 1:638985/1‑52 (MQ=255) ggCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGCACAACCCCTGCTTTg > 1:1412298/1‑91 (MQ=255) ggCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGCACAACCCCTGCTTTg < 2:1412298/91‑1 (MQ=255) ggCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGCACAACCCCTGCTTTGGTTCATAATGACGGAGCTGGCAGCCAGGGTGGGCGAGACGGCAGGGCGATTGGCTTGAt < 2:2313058/150‑1 (MQ=255) gCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGCACAACCCCTGCTTTGGTTCATAATGACGGCACTCCCAGCCAGGGTGGGCGAGACGGCAGGGCGATTGGCTTGAtc > 2:1999670/1‑150 (MQ=255) cAAGCGGCAGCCGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGCACAACCCCTGCTTTGGTTCATAATGACGGAGCTGGCAGCCAGGGTGGGCGAGACGGCAGGGCGATTGGCTTGAtct < 2:831131/150‑1 (MQ=255) aaGCGGCAGCCGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGCACAACCCCTGCTTTGGTTCATAATGACGGAGCTGGCAGCCAGGGTGGGCGAGACGGCAGGGCGATTGGCTTGAtctc > 2:730828/1‑150 (MQ=255) aGCGGCAGCCGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGCACAACCCCTGCTTTGGTTCATAATGACg < 1:134650/100‑1 (MQ=255) aGCGGCAGCCGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGCACAACCCCTGCTTTGGTTCATAATGACg > 2:134650/1‑100 (MQ=255) gcggcaGCCGCCGCTTGCCGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGCACAACCCCTGCTTTGGTTCATAATGACGGAGCTGGCAGCCAGGGTGGGCGAGACGGCAGGGCGATTGGCTTGATCTccc > 2:831339/1‑150 (MQ=255) tGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGCACAACCCCTGCTTTGGTTCATAATGACGGAGCTGGCa > 2:707361/1‑100 (MQ=255) tGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGCACAACCCCTGCTTTGGTTCATAATGACGGAGCTGGCa < 1:707361/100‑1 (MQ=255) | CGGCGCTCCAAGCGCGATGATCATTTCTGTACGGCAGAAGTTGCGGCGATGTGCCTGGACCTTGCTGGCGATGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTG‑AGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACGACACCCACCAGCGTTTGCATACCTTCCTATAGTCCAAGGGGCACAACCCCTGCTTTGGTTCATAATGACGGAGCTGGCAGCCAGGGTGGGCGAGACGGCAGGGCGATTGGCTTGATCTCCC > NC_002947/1831677‑1831963 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |