| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 196,795 | G→C | 9.1% | T767T (ACG→ACC) | PP_0168 → | putative surface adhesion protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 196,795 | 0 | G | C | 9.1% | 203.0 / 10.5 | 76 | T767T (ACG→ACC) | PP_0168 | putative surface adhesion protein |
| Reads supporting (aligned to +/- strand): ref base G (36/33); new base C (3/4); total (39/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.08e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.88e-01 | |||||||||||
CAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGA‑C‑GGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTC > NC_002947/196646‑196938 | cAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACg > 2:2014891/1‑150 (MQ=255) aCCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCAGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAg > 1:210197/1‑150 (MQ=255) ccGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGa < 1:849432/150‑1 (MQ=40) gTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGAcc > 1:1179334/1‑150 (MQ=39) ttGAAGCCGGCAACACCCAGGGCTGCGTAGATTTTGAGACCCCGGCGAATGACGTCTATAACCAGAGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCa < 2:1888146/150‑1 (MQ=11) aaGCCGGAATGGCCATGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGa < 2:1267946/150‑1 (MQ=11) cGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTCCAGCACCGCTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGCAACTTCGACCACCTGACCCCGAACCCGCCGCCGGCACATCCCACGATCaa > 2:592013/1‑150 (MQ=11) cGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCaa < 1:944873/150‑1 (MQ=38) ggCAAGACCCAGGGCAGCGTCGATTTCCATACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAAc > 1:555110/1‑150 (MQ=37) ccAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCg > 1:2380120/1‑148 (MQ=35) ccAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCg < 2:2380120/148‑1 (MQ=35) ccAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGt > 1:1794903/1‑150 (MQ=35) gTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGccacc > 1:2116040/1‑150 (MQ=35) tCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGa < 1:690427/150‑1 (MQ=35) aGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGAccc > 1:545036/1‑150 (MQ=35) ccGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGA‑C‑g < 2:1179334/150‑1 (MQ=34) ggCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGA‑C‑GGc > 1:1262610/1‑150 (MQ=35) gCGAATGACGTCAACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAAAGCCACTGGCGGCACCTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGA‑C‑GGCg > 2:702136/1‑150 (MQ=255) tCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGA‑C‑GGCGAGCCCGTCgg > 1:57712/1‑150 (MQ=32) tACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGAcc > 1:2210263/1‑129 (MQ=33) tACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGAcc < 2:2210263/129‑1 (MQ=33) aacaacGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGc < 2:951960/113‑1 (MQ=33) aacaacGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGc > 1:951960/1‑113 (MQ=33) aacaacGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGA‑C‑GGCGAg > 1:1699008/1‑137 (MQ=33) aacaacGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGA‑C‑GGCGAg < 2:1699008/137‑1 (MQ=33) caacGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCa < 2:783171/84‑1 (MQ=35) caacGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCa > 1:783171/1‑84 (MQ=35) caacGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGA‑C‑GGCGAGccc > 2:225242/1‑138 (MQ=33) caacGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGA‑C‑GGCGAGccc < 1:225242/138‑1 (MQ=32) caacGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGA‑C‑GGCGAGCCCGTCGGTCACCGa > 2:44412/1‑150 (MQ=32) aacTGTTCGACCGGCAGCGTCACCATCGAGAACGCCACTGGCGTCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGA‑C‑GGCGAGCCCGTCGGTCACCGaa < 1:985401/150‑1 (MQ=12) aacGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGA‑C‑GGCGAGCCCGTCGGTCACCGaa < 2:210197/150‑1 (MQ=32) acGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGTCACCACCGCGACCCTGA‑C‑GGCGAGCCCGTCGGTCACCGAAg < 1:2014891/150‑1 (MQ=17) gACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGGTGACCCCGAACCCTGCGCCGGCGCAGCCCACGAGCAACTACTGTGGTGATGCCACCACGGCGACCCGGA‑C‑GGCGAGCCCGTCGGTCACCGAAGgcggcgg > 1:1099896/1‑149 (MQ=11) gACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGA‑C‑GGCGAGCCCGTCGGTCACCGAAGGCGGCGt < 1:1277455/150‑1 (MQ=32) aCCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGA‑C‑GGCGAGCCCGTCGGTCACCGAAGGCGGCGTg > 2:60546/1‑150 (MQ=32) ccGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGA‑C‑GGCGAGCCCGTCGGTCACCGAAGGCGGCGTGa < 2:555110/150‑1 (MQ=32) gTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGA‑C‑GGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATc > 1:275403/1‑150 (MQ=32) gTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTAGATGCAGCCACCGCGACCCTGA‑C‑GGCAAGCCCGTCGGTCACCGAAGGTGACGTGATc > 2:2346479/1‑150 (MQ=11) tCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGAt > 2:2388944/1‑79 (MQ=35) tCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGAt < 1:2388944/79‑1 (MQ=35) cAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGA‑C‑GGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCAc < 2:1794903/150‑1 (MQ=32) cGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGA‑C‑GGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTa > 2:919318/1‑150 (MQ=32) tCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGA‑C‑GGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTaca < 2:1262610/150‑1 (MQ=32) tCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGA‑C‑GGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGa < 2:57712/150‑1 (MQ=32) tCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGA‑C‑GGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGa > 1:2231537/1‑150 (MQ=32) gaACGCCACTGGCGGCAACTTCCAACAGCTGACTCCGAACCCGACGCCGGCTCAGAGCACGATCAACTACTCGGTCGCTGCCACCACCGCGACCCTGA‑C‑GGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCt < 2:756685/150‑1 (MQ=11) aaCGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGA‑C‑GGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGa > 2:1764600/1‑145 (MQ=32) aaCGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGA‑C‑GGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGa < 1:1764600/145‑1 (MQ=32) aCGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGA‑C‑GGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGa < 2:2231537/150‑1 (MQ=35) gCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGA‑C‑GGCGAGCCCGTCGGTCACCGAAggcg > 2:2248017/1‑121 (MQ=33) gCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGA‑C‑GGCGAGCCCGTCGGTCACCGAAggcg < 1:2248017/121‑1 (MQ=32) cACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGA‑C‑GGCGAGCCCGTCGGTCACCGAAggcggc < 2:174106/121‑1 (MQ=33) cACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGA‑C‑GGCGAGCCCGTCGGTCACCGAAggcggc > 1:174106/1‑121 (MQ=32) ggcggcAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGA‑C‑GGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCt < 1:919318/150‑1 (MQ=32) ggcggcAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGA‑C‑GGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCt < 2:2116040/150‑1 (MQ=32) ggcAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGA‑C‑GGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGcc > 1:1482414/1‑150 (MQ=32) gcAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGA‑C‑GGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGccc > 1:2060408/1‑150 (MQ=32) ttCGAACAGCTGTCCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCCGTCGATGCCACCACCGCGACCCTGA‑C‑GGCGAGCCCGTCGGGCACCGAAGTCCGCTTGATCACCTACACCGTGACCCTGCGCAATCCTACCCAGAca > 2:973383/1‑149 (MQ=11) ttCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGA‑C‑GGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACg > 2:1965020/1‑150 (MQ=32) cGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGA‑C‑GGCGAGCCCGTCGGGCCCCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGcc > 2:373408/1‑150 (MQ=17) gAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGA‑C‑GGCGCGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCg < 2:2032269/150‑1 (MQ=17) aCAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGA‑C‑GGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGt > 1:2010230/1‑150 (MQ=32) cAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGA‑C‑GGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTg < 2:2234665/150‑1 (MQ=33) aGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGA‑C‑GGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGa > 1:945043/1‑150 (MQ=34) gACCCCGAACCCAACGCCAGCTCAGCCCACGCTCAACGACTCGGTCGATGCCACCACCGCGACCCTGA‑C‑GGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTCCACCGTGACCCTGGGGAATCCTGCCCAGACGCCGGTGACAGt < 1:1184823/150‑1 (MQ=11) cctcccGAACCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGA‑C‑GGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGt < 1:630643/147‑1 (MQ=9) aCCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGA‑C‑GGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTg > 1:2375139/1‑150 (MQ=32) aCCCCGAACCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGA‑C‑GGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTg > 2:1294159/1‑150 (MQ=12) ccccGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGA‑C‑GGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGa < 1:1702213/150‑1 (MQ=32) cccGAACCCGACCCCGACTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGA‑C‑GGCGAGCCCGTCGGTCACCGAAGGCGGCGTCATCACCTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACAGTGAc > 2:712447/1‑150 (MQ=255) ccGAACCCGACGCCGGATCAGACCTTGATCTACGGCTCTTTCAATGCCACCACAGCGTCCCCGAGCTGTCGAG‑‑TTTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGAcc < 1:44412/150‑1 (MQ=2) ccGAACCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGA‑C‑GGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGAcc < 1:94867/150‑1 (MQ=17) ccGAACCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGA‑C‑GGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGAcc > 2:1363843/1‑150 (MQ=17) aCCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGA‑C‑GGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGt < 1:680904/150‑1 (MQ=9) aCCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGA‑C‑GGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGt < 2:1079694/150‑1 (MQ=14) cccGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGA‑C‑GGCGAGCCCGTCGGTCACCGAAGGCGGCGAGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTc > 1:28081/1‑150 (MQ=11) | CAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGA‑C‑GGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTC > NC_002947/196646‑196938 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |