Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 1,863,282 | T→A | 8.3% | L309Q (CTG→CAG) | PP_1666 → | hypothetical protein |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 1,863,282 | 0 | T | A | 8.3% | 287.2 / 12.1 | 95 | L309Q (CTG→CAG) | PP_1666 | hypothetical protein |
Reads supporting (aligned to +/- strand): ref base T (46/40); new base A (4/4); total (50/45) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.42e-01 |
Only 100 of 105 total aligned reads displayed.
GCAAGTGCAGGGCATGAACCTGCAGCGCTATGCCGAGCTGGCCCGCGTGCTTGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCG > NC_002947/1863136‑1863430 | gCAAGTGCAGGGCATGAACCTGCAGCGCTATGCCGAGCTGGCCCGCGTGCTTGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTtggccaggc < 2:1284746/150‑1 (MQ=255) cAAGTGCAGGGCATGAACCTGCAGCGCTATGCCGAGCTGGCCCGCGTGCTTGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTtggcctggcc > 1:2330343/1‑150 (MQ=255) aaGTGCAGGGCATGAACCTGCAGCGCTATGCCGAGCTGGCCCGCGTGCTTGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACGTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCa > 1:2094635/1‑150 (MQ=255) tGCAGGGCATGAACCTGCAGCGCTATGCCGAGCTGGCCCGCGTGCTTGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGc < 2:798485/150‑1 (MQ=255) tGCAGGGCATGAACCTGCAGCGCTATGCCGAGCTGGCCCGCGTGCTTGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGc > 2:1139359/1‑150 (MQ=255) cAGGGCATGAACCTGCAGCGCTATGCCGAGCTGGCCCGCGTGCTTGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTg > 1:1114155/1‑150 (MQ=255) aGGGCCTGAAAGTCCTGCCCTATGCCGAGCTGGCCCGCGTGCTTGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTATGGGGTTACGGGCAATCGTGACCAGCTACGTGCCCAGCTTGGCCTGGCCACGCTGc < 2:61929/150‑1 (MQ=255) aGGGCATGAACCTGCAGCGCTATGCCGAGCTGGCCCGCGTGCTTGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCAGGCCAAGTTgg < 2:1411550/150‑2 (MQ=255) aGGGCATGAACCTGCAGCGCTATGCCGAGCTGGCCCGCGTGCTTGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCAGGCCAAGCTgg < 1:2085510/150‑2 (MQ=255) ggCATGAACCTGCAGCGCTATGCCGAGCTGGCCCGCGTGCTTGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAg > 2:1021315/1‑150 (MQ=255) aTGCCGAGCTGGCCCGCGTGCTTGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAgg < 2:300097/150‑1 (MQ=255) gAGCTGGCCCGCGTGCTTGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACcg < 1:1110867/150‑1 (MQ=255) tGGCCCGCGTGCTTGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCAGGCCACGCTg < 2:603099/119‑1 (MQ=255) tGGCCCGCGTGCTTGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCAGGCCAAGCTg > 1:603099/1‑119 (MQ=255) ggCCCGCGTGCTTGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCa > 2:883530/1‑142 (MQ=255) ggCCCGCGTGCTTGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCa < 1:883530/142‑1 (MQ=255) ggCCCGCGTGCTTGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGt < 2:2215120/150‑1 (MQ=255) ggCCCGCGTGCTTGAGCCCTATGGCCCACGCTTACAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGt > 2:441711/1‑150 (MQ=255) gCCCGCGTGCTTGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTg > 1:472276/1‑150 (MQ=255) gCCCGCGTGCTTGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTg > 2:2365702/1‑150 (MQ=255) ccGCGTGCTTGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGcc > 1:225999/1‑150 (MQ=255) ccGCGTGCTTGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAAGAAGTGCCGGTCGAGCAGGCCCCGGCGGTGcc > 1:307957/1‑150 (MQ=255) cgTGTTTTACCCCTATGCTCCTCGCTTTAATGCGTCTGAAGGCATTACCCTGACGTACGGGGTTACGGGCAATCGTGAACAGCGAGGTGCCCAGCTTCCCCGCGCCAGGCTGCAGTAAGTGCCGCTCGAGCCGGCACCGCCGGGGcgtgc < 2:679457/150‑5 (MQ=255) tGCTTGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCa < 2:38703/150‑1 (MQ=255) ttGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAg > 1:798243/1‑110 (MQ=255) ttGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAg < 2:798243/110‑1 (MQ=255) ttGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGc > 2:543283/1‑150 (MQ=255) ttGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGc > 2:360216/1‑150 (MQ=255) ttGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGc < 1:1515260/150‑1 (MQ=255) gAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCa < 1:1139359/150‑1 (MQ=255) cTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTAcc > 2:643696/1‑150 (MQ=255) cTATGGCCCACGCTTGAAGGCGGCTGAAGGCACTACACTGACCTACGGGGTTACGCGCAATGGTGAACAGCTACGTTCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTACCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTAcc > 2:255040/1‑150 (MQ=255) tATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCg > 2:2012547/1‑150 (MQ=255) cccACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCgg < 1:1339959/107‑1 (MQ=255) cccACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCgg > 2:1339959/1‑107 (MQ=255) cccACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTAcc > 2:2043398/1‑144 (MQ=255) cccACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTAcc < 1:2043398/144‑1 (MQ=255) ccACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAg > 2:1888504/1‑96 (MQ=255) ccACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAg < 1:1888504/96‑1 (MQ=255) cACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTgg > 1:239851/1‑150 (MQ=255) aCGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCa < 2:1250483/131‑1 (MQ=255) aCGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGACTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCa > 1:1250483/1‑131 (MQ=255) gCTTGCAGGCGGCTGAAGGCACTACACTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACATTCCAAGCTTGGCCTGGCCAAGCTGCAGGGAGTGCCGGTCGAACAGGCACCGACGGTCCCGGCCATGCTAACACTGGCAGTGGAcc > 2:1041612/1‑149 (MQ=255) ttGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGGCAGTACCGGCCGTGGAcgcc > 2:764578/1‑150 (MQ=255) aGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAg > 2:346691/1‑150 (MQ=255) gcggcTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGt > 1:976768/1‑137 (MQ=255) gcTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCcgcg < 1:720890/150‑1 (MQ=255) tGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCa < 1:1104615/150‑1 (MQ=255) tGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGCCGGTGcctgctc > 1:1294740/1‑111 (MQ=255) gAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGt > 1:818975/1‑131 (MQ=255) gAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGt < 2:818975/131‑1 (MQ=255) ggCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGccc > 2:1136743/1‑150 (MQ=255) gCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCg < 2:29451/83‑1 (MQ=255) gCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCg > 1:29451/1‑83 (MQ=255) aCTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCcgcg > 1:1494190/1‑150 (MQ=255) aCTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCcgcg > 1:97089/1‑150 (MQ=255) aCTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCcgcg > 2:1906453/1‑150 (MQ=255) aCCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCt < 1:441711/150‑1 (MQ=255) cccTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTtggcct < 1:1735249/55‑1 (MQ=255) cccTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTtggcct > 2:1735249/1‑55 (MQ=255) cccTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTg < 1:2012547/150‑1 (MQ=255) cccTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTg > 2:1538868/1‑150 (MQ=255) ccTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCa > 2:642389/1‑66 (MQ=255) ccTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCa < 1:642389/66‑1 (MQ=255) tGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAAGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTgcgc > 1:906022/1‑150 (MQ=255) gACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGca < 1:458408/150‑1 (MQ=255) tACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGcagcca > 2:1726821/1‑150 (MQ=255) ggTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGc > 2:2046813/1‑95 (MQ=255) ggTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGc < 1:2046813/95‑1 (MQ=255) tACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAAGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCaa < 2:906022/150‑1 (MQ=255) gggCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGt > 2:885400/1‑93 (MQ=255) gggCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGt < 1:885400/93‑1 (MQ=255) gggCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGcc > 1:1315976/1‑150 (MQ=255) gCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGca > 1:1037632/1‑133 (MQ=255) gCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGca < 2:1037632/133‑1 (MQ=255) aaTCGGGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCCGCGCAGCCAGCACCCAAGCCGTTc < 1:685268/150‑1 (MQ=255) tCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGtcgaa > 2:164113/1‑146 (MQ=255) aGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGcag < 2:2131377/122‑1 (MQ=255) aGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTCGA‑ACGGCTTgg < 1:164113/150‑2 (MQ=255) aGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCG‑TCGAACGGCTTgg < 1:360216/150‑2 (MQ=255) aGCTACGTGCCCAGCTTGGCCTGGCCAAACTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGcag > 1:2131377/1‑122 (MQ=255) gCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACGCAAGCCG‑TCGAACGGCTTggg < 1:2365702/150‑3 (MQ=255) gCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTCGA‑ACGGCTTggg < 1:346691/150‑3 (MQ=255) tACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGa < 2:1288583/88‑1 (MQ=255) tACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGa > 1:1288583/1‑88 (MQ=255) cttcctgcAGCTTGGCCAGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGttt > 2:1924278/8‑150 (MQ=255) gCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGTTATGACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGc < 1:1021315/150‑1 (MQ=255) gCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGc < 2:1114155/150‑1 (MQ=255) tgcAGCTTGGCCAGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCt > 1:1359335/3‑150 (MQ=255) cccAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCt < 2:472276/150‑1 (MQ=255) gcAGCTTGGCCAGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTg > 1:1118509/2‑150 (MQ=255) cAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTgg > 2:1071578/1‑150 (MQ=255) cAGCTTGGCCTGGACAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGGCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTgg > 1:432050/1‑150 (MQ=255) ttGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAg < 2:225999/150‑1 (MQ=255) ttGGCCAGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAg < 2:1359335/150‑1 (MQ=255) ggcctggccAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGa < 2:239851/150‑1 (MQ=255) gccaggccAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGa > 1:1346313/1‑149 (MQ=255) cctggccAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAgc > 1:882507/1‑150 (MQ=255) ctggccAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTc < 2:1938866/136‑1 (MQ=255) ctggccAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAgcg > 1:1839445/1‑150 (MQ=255) | GCAAGTGCAGGGCATGAACCTGCAGCGCTATGCCGAGCTGGCCCGCGTGCTTGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCG > NC_002947/1863136‑1863430 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |