| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,886,644 | C→T | 6.6% | D423D (GAC→GAT) | rmuC → | DNA recombination limiting inversions protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,886,644 | 0 | C | T | 6.6% | 267.4 / 6.4 | 92 | D423D (GAC→GAT) | rmuC | DNA recombination limiting inversions protein |
| Reads supporting (aligned to +/- strand): ref base C (45/40); new base T (3/3); total (48/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.27e-01 | |||||||||||
TGATTGTCAGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACCTGCT > NC_002947/1886496‑1886793 | tGATTGTCAGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCCGCTCGTTCGCGAAAGGGCCGAGCGGGCCTGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACg < 1:2100113/150‑1 (MQ=255) aTTGTCAGCCCTACCACGTTGCTGGCCACCTTGCGGGGTATAGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCCCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGTCCTGGATGaa < 2:2117319/150‑1 (MQ=255) tGTCAGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACt < 2:851396/150‑1 (MQ=255) tCAGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGCCTAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTgg < 1:194315/150‑1 (MQ=255) ggtgCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTgg < 2:869802/147‑1 (MQ=255) cAGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCGTCCAGGTCCTGGATGAAcagca < 2:105905/150‑5 (MQ=255) aGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTGGG‑c < 2:1148698/150‑1 (MQ=255) gCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTGGG‑Ca < 2:1060580/150‑1 (MQ=255) gCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTGGG‑Ca > 1:1060580/1‑150 (MQ=255) ccTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTGGG‑CAGc > 2:1462470/1‑150 (MQ=255) cACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTGGG‑CAGCCGCtt < 1:1734869/150‑1 (MQ=255) gTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTGGG‑CAGCCGCTTgca < 2:2363799/150‑1 (MQ=255) cTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGcagcag < 1:1697311/150‑1 (MQ=255) gCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTTGG‑CAGCCGCTTgcagca < 2:486472/146‑1 (MQ=255) gCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTTGG‑CAGCCGCTTgcagca > 1:486472/1‑146 (MQ=255) cACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACg > 2:1031384/1‑122 (MQ=255) cACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACg < 1:1031384/122‑1 (MQ=255) ccTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGt < 1:2089269/145‑1 (MQ=255) acTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGt > 2:2089269/2‑145 (MQ=255) gTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTAt > 1:470349/1‑150 (MQ=255) tATCGACAGCCTGTGGAAGTAGGAGCGTAAATGGCAGATCTTTTTCGAAATTGCCGAGCTGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCtttttg < 1:1892272/150‑5 (MQ=255) tcggcAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTg < 1:1628534/130‑1 (MQ=255) tCGGCAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTg > 2:1628534/1‑134 (MQ=255) tCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCgg < 2:541318/150‑1 (MQ=255) aCAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTgg > 2:1241072/1‑111 (MQ=255) aCAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTgg < 1:1241072/111‑1 (MQ=255) aCAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAg > 1:1732804/1‑150 (MQ=255) aCAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAg > 2:2272269/1‑150 (MQ=255) gCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTGGG‑CAGCCGCTTCCAGCAGGTGGACAAGGCTTATGCGGCAgcgc > 2:506007/1‑150 (MQ=255) gCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATCGACGAGCGGGTGGGCTGGCTCTACGACAAGATCATGCTGTTCATCCAGGAAC‑ATAGGAAATGGGTCATCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAgcgc < 1:1252476/150‑1 (MQ=255) tgtgGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGca > 2:788869/1‑150 (MQ=255) tgGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGcaac > 1:1655145/1‑150 (MQ=255) gAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGcaacaa > 1:1040786/1‑150 (MQ=255) aGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGc > 2:1541311/1‑150 (MQ=255) aGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCtgt < 2:1315722/150‑1 (MQ=255) aGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAAGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCtgt > 2:325147/1‑150 (MQ=255) aGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCAAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCtgt > 1:1350312/1‑150 (MQ=255) ggAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCtgtg < 1:2326467/150‑1 (MQ=255) ggAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCtgtg > 2:1176686/1‑150 (MQ=255) gTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAg > 2:447122/1‑150 (MQ=255) aGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTGGG‑Ca < 1:2280863/89‑1 (MQ=255) aGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTGGG‑Ca > 2:2280863/1‑89 (MQ=255) gggCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTTCTGTTCATCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAATGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGt > 2:1816516/1‑150 (MQ=255) ggCAGAACGCCCTCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGCACAAGGCTTATGTGGCTGCGCGCAACAAGCTGTGCGAAGGGCGTg > 2:1469045/1‑150 (MQ=255) ggCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTg < 2:1700890/150‑1 (MQ=255) cGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCt < 1:1585663/150‑1 (MQ=255) gcgAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTa > 1:2168903/1‑150 (MQ=255) gAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGc < 1:1462470/150‑1 (MQ=255) ttGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTa > 2:1189542/1‑150 (MQ=255) ccGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCg > 1:1124219/1‑150 (MQ=255) gAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTTTGCGAATGGCGTTGCAACCTGGTTAACCATAGCGac > 2:1110225/1‑149 (MQ=255) gCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGagca < 1:2272269/150‑1 (MQ=255) ctctACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAgctgctc < 2:1732804/150‑2 (MQ=255) ctctACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGctgctg < 2:565547/150‑1 (MQ=255) tctACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAgctgctcg < 1:788869/150‑3 (MQ=255) tctACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTgg > 1:1985334/1‑150 (MQ=255) tctACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTgg > 1:2065127/1‑150 (MQ=255) tctACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCATAAGCTGCTgg > 1:1911028/1‑150 (MQ=255) tctACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTGGG‑CAGCCGCTTCCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTgg < 1:506007/150‑1 (MQ=255) cGACAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGgcgc > 1:520695/1‑150 (MQ=255) aCAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGccc < 1:447122/150‑1 (MQ=255) cAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAgg < 2:1298705/65‑1 (MQ=255) cAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAgg > 1:1298705/1‑65 (MQ=255) cAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCg > 2:1599246/1‑150 (MQ=255) ttCGTGCTGTTCATCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGcc > 2:587495/1‑150 (MQ=255) tGCTGTTCATCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCa > 1:1799487/1‑150 (MQ=255) gCTGTTCATCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCaa < 1:969871/150‑1 (MQ=255) ccagTTCGTCCAGGTCCTGGATGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTg < 1:2052042/100‑1 (MQ=39) ccagTTCGTCCAGGTCCTGGATGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTg > 2:2052042/4‑103 (MQ=39) tGTTCATCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAaga < 1:1176686/150‑1 (MQ=255) gTTCGTCCAGGTCCTGGATGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCGCCGTGAATCGCGGTGCAGTCTGGTTGGCCGTAGAGAGCACCTTACGCTGGAGGGCGCCCGTGCCAGCAagag > 1:1252117/1‑150 (MQ=255) gTTCATCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAagag < 1:1110225/150‑1 (MQ=255) ttCGTCCAGGTCCTGGATGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGc > 1:379592/1‑150 (MQ=255) ttCATCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTACGCTGCTGGGCGCCCGTGCCAGCAAGAGc < 1:574433/150‑1 (MQ=255) cATCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCtt > 2:2038273/1‑150 (MQ=255) aTCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGt < 2:2023409/87‑1 (MQ=255) aTCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGt > 1:2023409/1‑87 (MQ=255) aTCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCGCGTGTCGGGAAGAGCTTg > 2:1870025/1‑150 (MQ=255) aTCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTg > 1:1214969/1‑150 (MQ=255) tCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGcaac > 2:1810012/1‑68 (MQ=255) tCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGcaac < 1:1810012/68‑1 (MQ=255) cAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGcc > 2:1510293/1‑149 (MQ=255) cAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGcc < 1:1510293/149‑1 (MQ=255) gACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGCCGGct < 2:1655145/150‑2 (MQ=255) cTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGAc > 2:294877/1‑150 (MQ=255) tGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGACAGCGCGCAACAAGCTGTGCGAATGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGAcc < 1:1592419/150‑1 (MQ=255) ggACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCtacg < 2:41206/108‑4 (MQ=255) ggACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCtacg > 1:41206/1‑105 (MQ=255) ggACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACct > 2:935471/1‑150 (MQ=255) gACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACctg > 1:1128430/1‑150 (MQ=255) aCGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAgctgctc < 1:754444/113‑2 (MQ=255) aCGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAgctgctc > 2:754444/1‑112 (MQ=255) cGAACTGGG‑CAGCAGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACctgct < 2:1574828/150‑1 (MQ=255) | TGATTGTCAGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCTGGACGAACTGGG‑CAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACCTGCT > NC_002947/1886496‑1886793 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |