BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	1,948,216	C→G	5.6%	R494R (CGG→CGC)	PP_1749 ←	acetyltransferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	1,948,216	0	C	G	5.6%	317.4 / 7.1	101	R494R (CGG→CGC)	PP_1749	acetyltransferase
Reads supporting (aligned to +/- strand): ref base C (55/39); new base G (4/2); total (60/41)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.86e-01

Only 100 of 106 total aligned reads displayed.

GCCCGGCATCACGCACCATGAAGTCCAGCCCCACCACCGGAATTTCCAGTGCCCGTGCCGCGC‑GCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCTCTCGCCACCGGTGGCAGCCTGGCGTCGACGGCTCTGCGCTTCGATCAACTG  >  NC_002947/1948071‑1948365

gCCCGGCATCACGCACCATGAAGTCCAGCCCCACCACCGGAATTTCCAGTGCCCGTGCCGCGC‑GCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCa                                                                                                                                                   >  2:279584/1‑150 (MQ=255)

  ccGGCATCACGCACCATGAAGTCCAGCCCCACCACCGGAATTTCCAGTGCCCGTGCCGCGC‑GCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACg                                                                                                                                                 >  2:855474/1‑150 (MQ=255)

  ccGGCATCACGCACCATGAAGTCCAGCCCCACCACCGGAATTTCCAGTGCCCGTGCCGCGC‑GCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACg                                                                                                                                                 >  1:2165927/1‑150 (MQ=255)

          aCGCACCATGAAGTCCAGCCCCACCACCGGAATTTCCAGTGCCCGTGCCGCGC‑GCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGgcg                                                                                                                                         >  2:793981/1‑150 (MQ=255)

          aCGCACCATGAAGTCCAGCCCCACCACCGGAATTTCCAGTGCCCGTGCCGCGC‑GCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGCGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGgcg                                                                                                                                         >  2:1069201/1‑150 (MQ=255)

           cGCACCATGAAGTCCAGCCCCACCACCGGAATTTCCAGTGCCCGTGCCGCGC‑GCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGgcgc                                                                                                                                        <  2:36345/150‑1 (MQ=255)

            gCACCATGAAGTCCAGCCCCACCACCGGAATTTCCAGTGCCCGTGCCGCGC‑GCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCt                                                                                                                                       >  1:2057446/1‑150 (MQ=255)

            gCACCATGAAGTCCAGCCCCACCACCGGAATTTCCAGTGCCCGTGCCGCGC‑GCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCt                                                                                                                                       >  2:2385870/1‑150 (MQ=255)

            gCACCATGAAGTCCAGCCCCACCACCGGAATTTCCAGTGCCCGTGCCGCGC‑GCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCt                                                                                                                                       >  1:1732852/1‑150 (MQ=255)

                cATGAAGTCCAGCCCCACCACCGGAATTTCCAGTGCCCGTGCCGCGC‑GCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTggcc                                                                                                                                   >  1:945892/1‑150 (MQ=255)

                cATGAAGTCCAGCCCCACCACCGGAATTTCCAGTGCCCGTGCCGCGC‑GCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTggcc                                                                                                                                   >  1:137228/1‑150 (MQ=255)

                    aaGTCCAGCCCCACCACCGGAATTTCCAGTGCCCGTGCCGCGC‑GCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTggccggcc                                                                                                                               <  2:665841/150‑1 (MQ=255)

                     aGTCCAGCCCCACCACCGGAATTTCCAGTGCCCGTGCCGCGC‑GCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGgccggccg                                                                                                                              >  2:1793404/1‑150 (MQ=255)

                      gTCCAGCCCCACCACCGGAATTTCCAGTGCCCGTGCCGCGC‑GCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGccggccgg                                                                                                                             >  2:1885794/1‑150 (MQ=255)

                      gTCCAGCCCCACCACCGGAATTTCCAGTGCCCGTGCCGCGC‑GCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGACGCTGGGGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGccggccgg                                                                                                                             <  1:442104/150‑1 (MQ=255)

                       tCCAGCCCCACCACCGGAATTTCCAGTGCCCGTGCCGCGC‑GCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTggccggcc                                                                                                                               <  2:1209688/147‑1 (MQ=255)

                       tCCAGCCCCACCACCGGAATTTCCAGTGCCCGTGCCGCGC‑GCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCcggccggc                                                                                                                            >  2:515975/1‑150 (MQ=255)

                       tCCAGCCCCACCACCGGAATTTCCAGTGCCCGTGCCGCGC‑GCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGAGTCGCACGGCCAGGCGCTggccggcc                                                                                                                               >  1:1209688/1‑147 (MQ=255)

                         cAGCCCCACCACCGGAATTTCCAGTGCCCGTGCCGCGC‑GCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCaa                                                                                                                          >  2:1211091/1‑150 (MQ=255)

                           gCCCCACCACCGGAATTTCCAGTGCCCGTGCCGCGC‑GCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAaca                                                                                                                        <  1:2385870/150‑1 (MQ=255)

                              ccaccaCCGGAATTTCCAGTGCCCGTGCCGCGC‑GCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGgccggccg                                                                                                                              <  2:2206210/141‑1 (MQ=255)

                              ccaccaCCGGAATTTCCAGTGCCCGTGCCGCGC‑GCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGgccggccg                                                                                                                              >  1:2206210/1‑141 (MQ=255)

                               caccacCGGAATTTCCAGTGCCCGTGCCGCGC‑GCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACAcgtc                                                                                                                    >  2:2267860/1‑150 (MQ=255)

                               caccacCGGAATTTCCAGTGCCCGTGCCGCGC‑GCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACAcgtc                                                                                                                    >  2:1140798/1‑150 (MQ=255)

                               caccacCGGAATTTCCAGTGCCCGTGCCGCGC‑GCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACAcgtc                                                                                                                    >  1:460676/1‑150 (MQ=255)

                                 ccaccGGAATTTCCAGTGCCCGTGCCGCGC‑GCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACAcgtcgt                                                                                                                  >  1:1138239/1‑150 (MQ=255)

                                   accGGAATTTCCAGTGCCCGTGCCGCGC‑GCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCa                                                                                                                >  1:1744685/1‑150 (MQ=255)

                                    ccGGAATTTCCAGTGCCCGTGCCGCGC‑GCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCAt                                                                                                               >  1:1196266/1‑150 (MQ=255)

                                     cGGAATTTCCAGTGCCCGTGCCGCGC‑GCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAg                                                                                                                                            <  1:953271/120‑1 (MQ=255)

                                     cGGAATTTCCAGTGCCCGTGCCGCGC‑GCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAg                                                                                                                                            >  2:953271/1‑120 (MQ=255)

                                     cGGAATTTCCAGTGCCCGTGCCGCGC‑GCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATa                                                                                                              <  1:2267860/150‑1 (MQ=255)

                                     cGGAATTTCCAGTGCCCGTGCCGCGC‑GCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATa                                                                                                              <  1:94081/150‑1 (MQ=255)

                                     cGGAATTTCCAGTGCCCGTGCCGCGC‑GCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATa                                                                                                              <  1:1359504/150‑1 (MQ=255)

                                     cGGAATTTCCAGTGCCCGTGCCGCGC‑GCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTAACACGGTGATTTACGGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCAtg                                                                                                              >  2:1399000/1‑149 (MQ=255)

                                     cGGAATTTCCAGTGCCCGTGCCGCGC‑GCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGGCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGAACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATa                                                                                                              <  1:1846923/150‑1 (MQ=255)

                                      ggAATTTCCAGTGCCCGTGCCGCGC‑GCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAg                                                                                                             >  1:206699/1‑150 (MQ=255)

                                      ggAATTTCCAGTGCCCGTGACGCGC‑GCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAg                                                                                                             >  2:1264325/1‑150 (MQ=255)

                                              cAGTGCCCGTGCCGCGC‑GCACGGCAGCATCGGCCCGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGGGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGcc                                                                                                     >  2:1094555/1‑150 (MQ=255)

                                              cAGTGCCCGTGCCGCGC‑GCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACTTCGTCATAGCCaa                                                                                                         <  2:1170075/146‑1 (MQ=255)

                                              cAGTGCCCGTGCCGCGC‑GCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACTTCGTCATAGCCaa                                                                                                         >  1:1170075/1‑146 (MQ=255)

                                              cAGTGCCCGTGCCGCGC‑GCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGcc                                                                                                     >  1:454300/1‑150 (MQ=255)

                                                gTGCCCGTGCCGCGC‑GCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCTGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCg                                                                                                   >  2:1611107/1‑150 (MQ=255)

                                                  tgccGTG‑CGCGCGGCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCt                                                                                                 >  2:1583820/3‑150 (MQ=255)

                                                   cccGTGCCGCGC‑GCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTg                                                                                                >  1:2270719/1‑150 (MQ=255)

                                                    ccGTGCCGCGC‑GCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTgc                                                                                               <  2:1732852/150‑1 (MQ=255)

                                                                  aCGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTgcgc                                                                                  >  2:1294954/1‑150 (MQ=255)

                                                                    ggCAGCATCGGCCAGCACCGGGTGAAGGCGTTCGGTACCGTCCTCCCGGATGCCGCCAGTGCG‑ATCATGGCCAGTTCTGGCCGGGGCTAGGCGCGGGCCGTCCTGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTc                                                                                >  2:274489/1‑150 (MQ=255)

                                                                       agcaTCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTgcgc                                                                                             >  1:1347900/1‑134 (MQ=255)

                                                                       agcaTCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTgcgc                                                                                             <  2:1347900/134‑1 (MQ=255)

                                                                          aTCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGc                                                                                                            <  1:643618/116‑1 (MQ=255)

                                                                          aTCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGc                                                                                                            >  2:643618/1‑116 (MQ=255)

                                                                             ggCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTtcgtc                                                                       <  1:1294954/150‑1 (MQ=255)

                                                                              gCCTGCACCCGGTGCTGGCGTTCGGTGACGTCCTCCAGGGTGCCGACGGTCTGCAGTGATGCC‑GTGCGCCTCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTtcgtcg                                                                      >  1:2101368/1‑150 (MQ=255)

                                                                               ccAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCGCGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTcgtcgt                                                                     >  1:562499/1‑150 (MQ=255)

                                                                                cAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCCGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCgtcgtc                                                                    >  1:1021419/1‑150 (MQ=255)

                                                                                cAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTgcgcgc                                                                                           <  2:874907/127‑1 (MQ=255)

                                                                                cAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTgcgcgc                                                                                           >  1:874907/1‑127 (MQ=255)

                                                                                    aacGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCAGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGc                                                                >  2:2165388/3‑150 (MQ=255)

                                                                                    aCCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGc                                                                <  2:1138239/150‑1 (MQ=255)

                                                                                    aCCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGc                                                                <  1:896347/150‑1 (MQ=255)

                                                                                       gggTGCAGGCGTTCGGTGACGTCCTCCAGGCTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGa                                                             <  1:1211091/150‑1 (MQ=255)

                                                                                             aGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCgg                                                       >  1:1368545/1‑150 (MQ=255)

                                                                                             aGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCgg                                                       <  1:893744/150‑1 (MQ=255)

                                                                                                  ttCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCtctc                                                  <  1:279584/150‑1 (MQ=255)

                                                                                                  ttCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCtctc                                                  <  1:2080064/150‑1 (MQ=255)

                                                                                                  ttCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCtctc                                                  <  2:2270719/150‑1 (MQ=255)

                                                                                                     ggTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCTCTCGcc                                               >  2:253799/1‑150 (MQ=255)

                                                                                                       tGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGGGAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCTCTCGCCAc                                             >  1:2242852/1‑150 (MQ=255)

                                                                                                        gACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCTCTCGCCAcc                                            <  1:1140798/150‑1 (MQ=255)

                                                                                                              ctccAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCTCTCGCCACCGGTGGc                                      >  1:1809390/1‑150 (MQ=255)

                                                                                                               tgcAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCTCTCGACACCGGTGGCa                                     >  1:469361/3‑150 (MQ=255)

                                                                                                                  aGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCTCTCGCCACCGGTGGCAGcc                                  <  2:206699/150‑1 (MQ=255)

                                                                                                                   tgttGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCTCTCGCCACCGGTGGCAGCCt                                 >  2:947680/4‑150 (MQ=255)

                                                                                                                      tGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCTCTCGCCACCGGTGGCAGCCTGGc                              <  2:2405150/150‑1 (MQ=255)

                                                                                                                      tGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCTCTCGCCACCGCTGGCAGCCTGGc                              <  1:1885794/150‑1 (MQ=255)

                                                                                                                         cgccgGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGTCCGGCCGGAACCCCAGGGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGCAATGCGGCTCTCGCCACCGGTGGCAGCCTGGCGTc                           >  2:1289647/1‑150 (MQ=255)

                                                                                                                         cgccgGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTtcgtc                                                                       <  1:182200/106‑1 (MQ=255)

                                                                                                                         cgccgGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTtcgtc                                                                       >  2:182200/1‑106 (MQ=255)

                                                                                                                         cgccgGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCTCTCGCCACCGGTGGCAGCCTGGCGTc                           <  1:1583820/150‑1 (MQ=255)

                                                                                                                         cgccgGTGGGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCTCTCGCCACCGGTGGCAGCCTGGCGTc                           <  2:460676/150‑1 (MQ=255)

                                                                                                                           ccgGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCTCTCGCCACCGGTGGCAGCCTGGCGTCGa                         >  2:1111010/1‑150 (MQ=255)

                                                                                                                               tgtgCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCTCTCGCCACCGGTGGCAGCCTGGCGTCGACGGc                     <  1:515975/150‑1 (MQ=255)

                                                                                                                                  gCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCg                                                        <  2:801545/112‑1 (MQ=255)

                                                                                                                                  gCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCg                                                        >  1:801545/1‑112 (MQ=255)

                                                                                                                                     ggTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCTCTCGCCACCGGTGGCAGCCTGGCGTCGACGGCTCTgcg               >  1:751043/1‑150 (MQ=255)

                                                                                                                                       ttGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCTCTCGCCACCGGTGGCAGCCTGGCGTCGACGGCTCTGCGCt             >  2:2172116/1‑150 (MQ=255)

                                                                                                                                       ctGGCC‑GTGCGGCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCTCTCGCCACCGGTGGCAGCCTGGc                              >  2:1519476/2‑133 (MQ=255)

                                                                                                                                       ctGGCC‑GTGCGGCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCTCTCGCCACCGGTGGCAGCCTGGc                              <  1:1519476/132‑1 (MQ=255)

                                                                                                                                        tGGCC‑GTGCGGCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTtcgtc                                                                       >  1:1301422/1‑91 (MQ=255)

                                                                                                                                        tGGCC‑GTGCGGCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTtcgtc                                                                       <  2:1301422/91‑1 (MQ=255)

                                                                                                                                         ggCC‑GTGCGGCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCTCTCGCCACCGGTGGCAGCCTGGCGTCGACGGTTCTGCGCTTc           >  2:2337122/1‑150 (MQ=255)

                                                                                                                                           cc‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGc                                                                                                      >  1:1398448/1‑57 (MQ=255)

                                                                                                                                           cc‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGc                                                                                                      <  2:1398448/57‑1 (MQ=255)

                                                                                                                                           cc‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCTCTCGCCACCGGTGGCAGCCTGGCGTCGACGGCTCTGCGCTTCGa         <  1:961467/150‑1 (MQ=255)

                                                                                                                                           cc‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCTCTCGCCACCGGTGGCAGCCTGGCGTCGACGGCTCTGCGCTTCGa         <  2:137228/150‑1 (MQ=255)

                                                                                                                                                 cgccgcACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCTCTCGCCACCGGTGGCAGCCTGGTGTCGACGGCTCTGCGCTTCGATCAAc    <  2:2242852/150‑1 (MQ=255)

                                                                                                                                                  gccgcACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCTCTCGCCAc                                             <  2:1134044/108‑1 (MQ=255)

                                                                                                                                                  gccgcACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCTCTCGCCAc                                             >  1:1134044/1‑108 (MQ=255)

                                                                                                                                                  gccgcACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCTCTCGCCACCGGTGGCAGCCTGGCGTCGACGGCTCTGCGCTTCGATCAACt   >  2:440042/1‑150 (MQ=255)

                                                                                                                                                   ccgcACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCTCTCGCCACCGGTGGCAGCCTGGCGTCGACGGCTCTGCGCTTCGATCAACTg  <  2:2057446/150‑1 (MQ=255)

GCCCGGCATCACGCACCATGAAGTCCAGCCCCACCACCGGAATTTCCAGTGCCCGTGCCGCGC‑GCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCC‑GTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCTCTCGCCACCGGTGGCAGCCTGGCGTCGACGGCTCTGCGCTTCGATCAACTG  >  NC_002947/1948071‑1948365

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`