| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,031,417 | C→A | 11.5% | intergenic (+47/+28) | PP_1806 → / ← kdsA‑II | arabinose 5‑phosphate isomerase/2‑dehydro‑3‑deoxyphosphooctonate aldolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,031,417 | 0 | C | A | 11.5% | 312.2 / 21.4 | 111 | intergenic (+47/+28) | PP_1806/kdsA‑II | arabinose 5‑phosphate isomerase/2‑dehydro‑3‑deoxyphosphooctonate aldolase |
| Reads supporting (aligned to +/- strand): ref base C (50/48); new base A (8/5); total (58/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.62e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.72e-01 | |||||||||||
Only 100 of 111 total aligned reads displayed.
TACATGCTGGAGAACAAAATCCGTGCCTTGGCGGTGGTCGACGATTGCGGGGCTATTGTTGGCGTCGTCGAGATTTTTGACGGCAATCCCGTAGCGTGAAACAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGATCATCCAGCGCTTTGATTTGTGC‑CAGGAAGGGTTCCAGCTTGTCCAATGGCAGTGCGCTCGGGCCATCACACTTGGCCTGATC > NC_002947/2031272‑2031564 | tACATGCTGGAGAACAAAATCCGTGCCTTGGCGGTGGTCGACGATTGCGGGGCTATTGTTGGCGTCGTCGAGATTTTTGACGGCAATCCCGTAGCGTGAAACAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGaa < 1:1501725/150‑1 (MQ=255) cATGCTGGAGAACAAAATCCGTGCCTTGGCGGTGGTCGACGATTGCGGGGCTATTGTTGGCGTCGTCGAGATTTTTGACGGCAATCCCGTAGCGTGAAACAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGc > 1:1128842/1‑150 (MQ=255) cATGCTGGAGAACAAAATCCGTGCCTTGGCGGTGGTCGACGATTGCGGGGCTATTGTTGGCGTCGTCGAGATTTTTGACGGCAATCCCGTAGCGTGAAACAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTGGACAAGAAGc < 2:2097313/150‑1 (MQ=255) tGGAGAACAAAATCCGTGCCTTGGCGGTGGTCGACGATTGCGGGGCTATTGTTGGCGTCGTCGAGATTTTTGACGGCAATCCCGTAGCGTGAAACAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCtt > 1:1416654/1‑150 (MQ=255) gagaACAAAATCCGTGCCTTGGCGGTGGTCGACGATTGCGGGGCTATTGTTGGCGTCGTCGAGATTTTTGACGGCAATCCCGTAGCGTGAAACAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGc > 2:2216883/1‑146 (MQ=255) gagaACAAAATCCGTGCCTTGGCGGTGGTCGACGATTGCGGGGCTATTGTTGGCGTCGTCGAGATTTTTGACGGCAATCCCGTAGCGTGAAACAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGc < 1:2216883/146‑1 (MQ=255) agaACAAAATCCGTGCCTTGGCGGTGGTCGACGATTGCGGGGCTATTGTTGGCGTCGTCGAGATTTTTGACGGCAATCCCGTAGCGTGAAACAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTAc > 1:1068770/1‑150 (MQ=255) tCCGTGCCTTGGCGGTGGTCGACGGTTGCGAGGCTATTGTTGGCGTCGTCGAGATTTTTGACGGCAATGTCGTAGCGTGAAACAGGCGGTACTTATCGTTGGATAGGTAGGCAGGTGCTTCTTGTACAGAAGCGGCTTTACTCACcgtcg > 2:800451/1‑150 (MQ=255) gTGCCTTGGCGGTGGTCGACGATTGCGGGGCTATTGTTGGCGTCGTCGAGATTTTTGACGGCAATCCCGTAGCGTGAAACAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTa > 1:1065061/1‑137 (MQ=255) gTGCCTTGGCGGTGGTCGACGATTGCGGGGCTATTGTTGGCGTCGTCGAGATTTTTGACGGCAATCCCGTAGCGTGAAACAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAg > 1:812056/1‑150 (MQ=255) tGCCTTGGCGGTGGTCGACGATTGCGGGGCTATTGTTGGCGTCGTCGAGATTTTTGACGGCAATCCCGTAGCGTGAAACAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGa < 2:1068770/150‑1 (MQ=255) cTTGGCGGTGGTCGACGATTGCGGGGCTATTGTTGGCGTCGTCGAGATTTTTGACGGCAATCCCGTAGCGTGAAACAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTa > 1:667465/1‑150 (MQ=255) cTTGGCGGTGGTCGACGATTGCGGGGCTATTGTTGGCGTCGTCGAGATTTTTGACGGCAATCCCGTAGCGTGAAACAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTa > 2:1994958/1‑150 (MQ=255) ttGGCGGTGGTCGACGATTGCGGGGCTATTGTTGGCGTCGTCGAGATTTTTGACGGCAATCCCGTAGCGTGAAACAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAg < 2:1704256/150‑1 (MQ=255) cGGTGGTCGACGATTGCGGGGCTATTGTTGGCGTCGTCGAGATTTTTGACGGCAATCCCGTAGCGTGAAACAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCaa < 2:667465/150‑1 (MQ=255) tCGACGATTGCGGGGCTATTGTTGGCGTCGTCGAGATTTTTGACGGCAATCCCGTAGCGTGAAACAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACcgt > 1:2114193/1‑130 (MQ=255) tCGACGATTGCGGGGCTATTGTTGGCGTCGTCGAGATTTTTGACGGCAATCCCGTAGCGTGAAACAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACcgt < 2:2114193/130‑1 (MQ=255) acgaTTGCGGGGCTATTGTTGGCGTCGTCGAGATTTTTGACGGCAATCCCGTAGCGTGAAACAGACGGTAATTAACATTACCTGAATAGGCAGCCGCATGGTATGCAGATTGGGCTTTACGTACCGTCGGAGATTAGGCAATAGTCAAtt > 2:528562/1‑150 (MQ=255) gaTTGCGGGGCTATTGTTGGCGTCGTCTAGATTTTTGACGGCAATCCCGTAGCGTGAAACAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTAAAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGc > 1:2371304/1‑150 (MQ=255) ttGCGGGGCTATTGTTGGCGTCGTCGAGATTTTTGACGGCAATCCCGTAGCGTGAAACAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCgg < 2:2390891/150‑1 (MQ=255) ttGCGGGGCTATTGTTGGCGTCGTCGAGATTTTTGACGGCAATCCCGTAGCGTGAAACAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCgg < 2:535452/150‑1 (MQ=255) cGGGGCTATTGTTGGCGTCGTCGAGATTTTTGACGGCAATCCCGTAGCGTGAAACAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGaa < 1:472912/150‑1 (MQ=255) ggggCTATTGTTGGCGTCGTCGAGATTTTTGACGGCAATCCCGTAGCGTGAAACAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGc < 2:777923/104‑1 (MQ=255) ggggCTATTGTTGGCGTCGTCGAGATTTTTGACGGCAATCCCGTAGCGTGAAACAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGc > 1:777923/1‑104 (MQ=255) ggggCTATTGTTGGCGTCGTCGAGATTTTTGACGGCAATCCCGTAGCGTGAAACAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAAt > 1:1751690/1‑150 (MQ=255) ggggCTATTGTTGGCGTCGTCGAGATTTTTGACGGCAATCCCGTAGCGTGAAACAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAAt > 1:1623545/1‑150 (MQ=255) ggggCTATTGTTGGCGTCGTCGAGATTTTTGACGGCAATCCCGTAGCGTGAAACAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGACCAGGAGCGGCTTTACGCACCTTCGGAGATTAGGCAATAGTCAATTGCGGGAAt > 2:528852/1‑150 (MQ=255) ggCTATTGTTGGCGTCGTCGAGATTTTTGACGGCAATCCCGTAGCGTGAAACAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATa > 1:704778/1‑133 (MQ=255) ggCTATTGTTGGCGTCGTCGAGATTTTTGACGGCAATCCCGTAGCGTGAAACAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATa < 2:704778/133‑1 (MQ=255) ttgttgGCGTCGTCGAGATTTTTGACGGCAATCCCGTAGCGTGAAACAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTa < 2:1128842/150‑1 (MQ=255) tgttgGCGTCGTCGAGATTTTTGACGGCAATCCCGTAGCGTGAAACAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTAc < 1:2208564/150‑1 (MQ=255) ttgGCGTCGTCGAGATTTTTGACGGCAATCCCGTAGCGTGAAACAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCa < 1:1409891/150‑1 (MQ=255) ttgGCGTCGTCGAGATTTTTGACGGCAATCCCGTAGCGTGAAACAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCa < 2:1623545/150‑1 (MQ=255) ggCGTCGTCGAGATTTTTGACGGCAATCCCGTAGCGTGAAACAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGa < 2:812056/150‑1 (MQ=255) gtcgtcGAGATTTTTGACGGCAATCCCGTAGCGTGAAACAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGa < 1:545430/110‑1 (MQ=255) gtcgAGATTTTTGACGGCAATCCCGTAGCGTGAAACAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGATCATcc > 1:1339961/1‑150 (MQ=255) tcgAGATTTTTGACGGCAATCCCGTAGCGTGAAACAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTGGACAAGAAGCgg > 2:1179053/1‑87 (MQ=39) tcgAGATTTTTGACGGCAATCCCGTAGCGTGAAACAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTGGACAAGAAGCgg < 1:1179053/87‑1 (MQ=39) ttGACGGCAATCCCGTAGCGTGAAACAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGATCATCCAGCGCTTTGa > 1:1047007/1‑150 (MQ=255) tGACGGCAATCCCGTAGCGTGAAACAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGATCATCCAGCGCTTTGAt < 1:528852/150‑1 (MQ=255) aCGGCAATCCCGTAGCGTGAACCAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGCTTCCGCAATAGTCAATTGTGGGAATCATTTTCGCAGATCATCCTGTGCTTTGAttt < 2:1727091/150‑1 (MQ=255) cGGCAATCCCGTAGCGTGAAACAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGATCATCCAGCGCTTTGATTtg < 1:1452253/150‑1 (MQ=255) ggtaaTCCCGTAGCGTGAACTAGCGGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGATCATCCAGCGCTTTGATTtgt < 2:1161367/147‑1 (MQ=255) ggCAATCCCGTAGCGTGAAACAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGATCATCCAGCGCTTTGATTtgt > 2:1513146/1‑150 (MQ=255) cAATCCCGTAGCGTGAAACAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCTGAAATGATTTTACCAGATCATCCAGCGCTTTGATTTGTGc > 1:1231897/1‑150 (MQ=255) aaTCCCGTAGCGTGAAACAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGATCATCCAGCGCTTTGAt < 2:323845/143‑1 (MQ=255) cGTAGCGTGAAACAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGATCATCCAGCGCTTTGATTTGTGC‑CAGGaa > 1:556091/1‑150 (MQ=255) cGTAGCGTGAAACAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGATCATCCAGCGCTTTGATTTGTGC‑CAGGaa < 1:219608/150‑1 (MQ=255) gTAGCGTGAAACAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATa > 2:1475323/1‑93 (MQ=255) gTAGCGTGAAACAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATa < 1:1475323/93‑1 (MQ=255) gCGTGAAACAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGATCATCCAGCGCTTTGATTTGTGC‑CAGGAAGGGt < 2:1339961/150‑1 (MQ=255) gTGAAACAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGATCATCCAgcgc > 2:1113559/1‑126 (MQ=255) gTGAAACAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGATCATCCAgcgc < 1:1113559/126‑1 (MQ=255) tGAAACAGCCGCTAATTATCATTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCTTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGATCATCCAGCGCTTTGATTTGTGC‑CAGGAAGGGTTcc < 1:2324150/150‑1 (MQ=255) tctaCAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGATCATCCAGCGCTTTGATTTGTGC‑CAGGACCGGGTCCa < 1:215478/147‑1 (MQ=255) aCAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGATCATCCAGCGCTTTGATTTGTGC‑CAGGAAGGGTTCCAGCt > 1:1123056/1‑150 (MQ=255) cAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACGCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGATCATCCAGCGCTTTGATTTGTGC‑CAGGAAGGGTTCCAgaga > 2:215478/1‑147 (MQ=255) aGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGATCATCCAgc > 1:2262224/1‑117 (MQ=255) ccGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTa > 1:870331/1‑72 (MQ=255) cGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGATCATCCAGCGCTTTGATTTGTGC‑CAGGAAGGGTTCCAGCTTGTcc > 1:1009527/1‑150 (MQ=255) gTAATTATCGTTGCCTGGGTAGGCGGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCATTAGTACATTGCGGGCAAGCTCGGAGCAGTTCATCCAGCGCTTTGATTTGTGC‑CAGGAAGGGTTCCGGCTTGTCCaa > 1:2089901/1‑150 (MQ=255) gTAATTATCGTTGCCTGGGTAGGCAGCCTTTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGATCATCCAGCGCTTTGATTTGTGC‑CAGGAAGGGTTCCAGCTTGTCCaa > 1:442677/1‑150 (MQ=255) tAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGATCATCCAGCGCTTTGATTTGTGC‑CAGGAAGGGTTCCAGCTTGTCCAAt < 1:1994958/150‑1 (MQ=255) tATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGATCATCCAGCGCTTTGATTTGTGC‑CAGGAAGGGTTCCAGCTTGTCCAATGGCa < 2:1416654/150‑1 (MQ=255) tATCGTTGCCTGGGTAGGCAGCCGCTTCCTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGATCATNCAGCGCTTTGATTTGTGC‑CAGGAAGGGTTCCAGCTTGTCCAATGGCa < 1:800451/150‑1 (MQ=255) aTCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGATCATCCAGCGCTTTGAtt > 1:1905493/1‑115 (MQ=255) tCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGAt < 2:1122673/60‑1 (MQ=255) tCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGAt > 1:1122673/1‑60 (MQ=255) tCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGa < 2:162782/96‑1 (MQ=255) tCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGa > 1:162782/1‑96 (MQ=255) tCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGATCATCCAGCGCTTTGAt < 2:1281529/113‑1 (MQ=255) tCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGATCATCCAGCGCTTTGAt > 1:1281529/1‑113 (MQ=255) tCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGATCATCCAGCGCTTTGATTTGTGC‑CAGGAAGGGTTCCAGCTTGTCCAATGGCAGt > 2:707413/1‑150 (MQ=255) gTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTa < 1:2229149/60‑1 (MQ=255) gTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTa > 2:2229149/1‑60 (MQ=255) tGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGATCATcc > 2:1274995/1‑94 (MQ=255) tGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGATCATcc < 1:1274995/94‑1 (MQ=255) tGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGATCATCCAGCGCTTTGa < 2:248709/104‑1 (MQ=255) tGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGATCATCCAGCGCTTTGa > 1:248709/1‑104 (MQ=255) gggTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGATCATCCAGCGCTTTGATTTGTGC‑CAGGAAGGGTTCCAGCTTGTCCAATGGCAGTGCGCTCggg > 1:1010804/1‑150 (MQ=255) ggTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCCCCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGAACATCCAGCGCTTTGATTTGTGC‑CAGGAAGGGTTCCAGCTTGTCCAATGGCAGTGCGCTCGGGc > 1:549603/1‑150 (MQ=255) ggTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCTTAGATTAGGCAATATTCAATTGCGGGAAGGATTTTACCAGATCATCCAGCGCTTTGATTTGTGC‑CAGGAAGGGTTCCAGCTTGTCCAATGGCAGTGCGCTCGGGc > 1:549622/1‑150 (MQ=255) ggTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGATCATCCAGCGCTTTGATTTGTGC‑CAg > 1:2002069/1‑112 (MQ=255) ggTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGATCATCCAGCGCTTTGATTTGTGC‑CAg < 2:2002069/112‑1 (MQ=255) ggTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGATCATCCAGCGCTTTGATTTGTGC‑CAGGAAGGGTTCCAGCTTGTCCAATGGCAGTGCGCCCggga < 2:1009527/150‑2 (MQ=255) aGCCGCTTCTGGACAAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGATCATCCAGCGCTTTGATTTGTGC‑CAGGAAgg < 2:1185290/110‑1 (MQ=255) gCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGATCATCCAGCGCTTTGATTTGTGC‑CAGGAAGGGTTCCAGCTTGTCCAATGGCAGTGCGCTCGGGCCATCacac > 2:312776/1‑150 (MQ=255) gCCGCTTCTGGACAAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGATCATCCAGCGCTTTGATTTGTGC‑CAGGAAGGGTTCCAGCTTGTCCAATGGCAGt > 2:753244/1‑132 (MQ=255) gCCGCTTCTGGACAAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGATCATCCAGCGCTTTGATTTGTGC‑CAGGAAGGGTTCCAGCTTGTCCAATGGCAGt < 1:753244/132‑1 (MQ=255) gCCGCTTCTGGACAAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGATCATCCAGCGCTTTGATTTGTGC‑CAGGAAGGGTTCCAGCTTGTCCAATGGCAGTGCGCTCGGGCCATCacac > 2:582955/1‑150 (MQ=255) ccGCTTCTGGACAAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGATCATCCAGCGCTTTGATTTGTGC‑CAGGAAgg < 2:854578/108‑1 (MQ=255) ccGCTTCTGGACAAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGATCATCCAGCGCTTTGATTTGTGC‑CAGGAAgg > 1:854578/1‑108 (MQ=255) ccGCTTCTGGACAAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGATCATCCAGCGCTTTGATTTGTGC‑CAGGAAGGGTTCCAGCTTGTCCAATGGCAGTGCGCTCGGGCCATCACACt > 1:185158/1‑150 (MQ=255) cGCTTCTGGACAAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGATCATCCAGCGCTTTGATTTGTGC‑CAGGAAGGGTTCCAGCTTGTCCAATGGCAGTGCGCTCGGGCCATCACACtt > 2:2047126/1‑150 (MQ=255) cttcttGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGATCATCCAGCGCTTTGATTTGTGC‑CAGGAAGGGTTCCAGCTTGTCCAATGGCAGTGCGCTCGGGCCATCACACTTgg < 2:2146069/150‑1 (MQ=255) cttGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGATCATCCAGCGCTTTGATTTGTGC‑CAGGAAGGGTTCCAGCTTGTCCAATGGCAGTGCGCTCGGGCCATCACACTTGGCCt < 2:1751690/150‑1 (MQ=255) ttGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGATCATCCAGCGCTTTGATTTGTGC‑CAGGAAGGGTTCCAGCTTGTCCAATGGCAGTGCGCTCGGGCCATCACACTTGGCCTg > 2:271029/1‑150 (MQ=255) gTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGATCATCCAGCGCTTTGATTTGTGC‑CAg > 2:329051/1‑94 (MQ=255) gTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGATCATCCAGCGCTTTGATTTGTGC‑CAg < 1:329051/94‑1 (MQ=255) tCCAGAAGCGGCTTTACTCACCGACGAAGATTACGAACTCAGCGATAGCGGGAAGGATTTTACCAGATCAGCAAGAGCATT‑ACGAACGCACGGCAATTGGTCCAGCTTGTCCAATGGCAGTGCGCTCGAGCCAACACACTTGGCCTGATc > 1:550550/1‑150 (MQ=255) | TACATGCTGGAGAACAAAATCCGTGCCTTGGCGGTGGTCGACGATTGCGGGGCTATTGTTGGCGTCGTCGAGATTTTTGACGGCAATCCCGTAGCGTGAAACAGCCGGTAATTATCGTTGCCTGGGTAGGCAGCCGCTTCTTGTCCAGAAGCGGCTTTACTCACCGTCGTAGATTAGGCAATAGTCAATTGCGGGAATGATTTTACCAGATCATCCAGCGCTTTGATTTGTGC‑CAGGAAGGGTTCCAGCTTGTCCAATGGCAGTGCGCTCGGGCCATCACACTTGGCCTGATC > NC_002947/2031272‑2031564 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |