| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,074,074 | G→A | 6.2% | intergenic (‑43/+160) | PP_1849 ← / ← ygaY | hypothetical protein/transporter YgaY |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,074,074 | 0 | G | A | 6.2% | 337.0 / 8.4 | 115 | intergenic (‑43/+160) | PP_1849/ygaY | hypothetical protein/transporter YgaY |
| Reads supporting (aligned to +/- strand): ref base G (51/56); new base A (2/5); total (53/62) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.47e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.11e-01 | |||||||||||
Only 100 of 117 total aligned reads displayed.
GCTCACCGGGTGAGGGGCTGCGCGCGGTCTTGAGTGTGAGCGATCCATTGCG‑ATACTCGCCTTCACCTTGCAAGAAGTCGCCGGATTGCACCGTGAGTCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTGTCGCCGTGGCCAATGGCCTCTTCGCGGGCGCTTCACAAACCTCAGGGCCGTGATACGTCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCA > NC_002947/2073926‑2074222 | gCTCACCGGGTGAGGGGCTGCGCGCGGTCTTGAGTGTGAGCGATCCATTGCG‑ATACTCGCCTTCACCTTGCAAGAAGTCGCCGGATTGCACCGTGAGTCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGa < 2:1361956/150‑1 (MQ=255)gCTCACCGGGTGAGGGGCTGCGCGCGGTCTTGAGTGTGAGCGATCCATTGCG‑ATACTCGCCTTCACCTTGCAAGAAGTCGCCGGATTGCACCGTGAGTCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGa > 2:2163586/1‑150 (MQ=255) aCCGGGTGAGGGGCTGCGCGCGGTCTTGAGTGTGAGCGATCCATTGCG‑ATACTCGCCTTCACCTTGCAAGAAGTCGCCGGATTGCACCGTGAGTCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAgcgc < 1:2066560/150‑1 (MQ=255) ccGGGTGAGGGGCTGCGCGCGGTCTTGAGTGTGAGCGATCCATTGCG‑ATACTCGCCTTCACCTTGCAAGAAGTCGCCGGATTGCACCGTGAGTCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCt < 1:2126804/150‑1 (MQ=255) ccGGGTGAGGGGCTGCGCGCGGTCTTGAGTGTGAGCGATCCATTGCG‑ATACTCGCCTTCACCTTGCAAGAAGTCGCCGGATTGCACCGTGAGTCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCt > 1:2086817/1‑150 (MQ=255) cGGGTGAGGGGCTGCGCGCGGTCTTGAGTGTGAGCGATCCATTGCG‑ATACTCGCCTTCACCTTGCAAGAAGTCGCCGGATTGCACCGTGAGTCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTCAGTAAGCGCTg < 2:1599813/150‑1 (MQ=255) cGGGTGAGGGGCTGCGCGCGGTCTTGAGTGTGAGCGATCCATTGCG‑ATACTCGCCTTCACCTTGCAAGAAGTCGCCGGATTGCACCGTGAGTCTTGTAATAAAGTCATCCTGTCATGGAAAGTGCATTTTCCAGCGCTCAGTAAGCGCTg < 2:1233731/150‑1 (MQ=255) gggTGAGGGGCTGCGCGCGGTCTTGAGTGTGAGCGATCCATTGCGAATGGTC‑ATTGTAGCTTGCAAGAAGTCGCCGGATTGCACCGTGAGTCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTCAGTAAGCGCTgg < 2:1871582/150‑2 (MQ=255) gggTGAGGGGCTGCGCGCGGTCTTGAGTGTGAGCGATCCATTGCG‑ATACTCGCCTTCACCTTGCAAGAAGTCGCCGGATTGCACCGTGAGTCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGc < 1:1238766/150‑1 (MQ=255) ggggCTGCGCGCGGTCTTGAGTGTGAGCGATCCATTGCG‑ATACTCGCCTTCACCTTGCAAGAAGTCGCCGGATTGCACCGTGAGTCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGgc > 2:1311367/1‑150 (MQ=255) ggggCTGCGCGCGGTCTTGAGTGTGAGCGATCCATTGCG‑ATACTCGCCTTCACCTTGCAAGAAGTCGCCGGATTGCACCGTGAGTCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGgc < 1:1553476/150‑1 (MQ=255) gggCTGCGCGCGGTCTTGAGTGTGAGCGATCCATTGCG‑ATACTCGCCTTCACCTTGCAAGAAGTCGCCGGATTGCACCGTGAGTCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGgc < 1:527066/149‑1 (MQ=255) gggCTGCGCGCGGTCTTGAGTGTGAGCGATCCATTGCG‑ATACTCGCCTTCACCTTGCAAGAAGTCGCCGGATTGCACCGTGAGTCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGgc > 2:527066/1‑149 (MQ=255) tGCGCGCGGTCTTGAGTGTGAGCGATCCATTGCG‑ATACTCGCCTTCACCTTGCAAGAAGTCGCCGGATTGCACCGTGAGTCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGgcaagca > 2:41156/1‑150 (MQ=255) tGCGCGCGGTCTTGAGTGTGAGCGATCCATAGCG‑ATACTCGCCTTCACCTTGCAAGAAGTCGCCGGA‑TGCACCGTGAGTCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGgcaagcaa < 2:2006800/150‑1 (MQ=255) gcgcgcGGTCTTGAGTGTGAGCGATCCATTGCG‑ATACTCGCCTTCACCTTGCAAGAAGTCGCCGGATTGCACCGTGAGTCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGgcaagcaa < 1:204920/150‑1 (MQ=255) gcgcgcGGTCTTGAGTGTGAGCGATCCATTGCG‑ATACTCGCCTTCACCTTGCAAGAAGTCGCCGGATTGCACCGTGAGTCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGgcaagcaa < 2:1212408/150‑1 (MQ=255) cgcgcgGTCTTGAGTGTGAGCGATCCATTGCG‑ATACTCGCCTTCACCTTGCAAGAAGTCGCCGGATTGCACCGTGAGTCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGcaagcaag < 2:1851/150‑1 (MQ=255) gcgcgGTCTTGAGTGTGAGCGATCCATTGCG‑ATACTCGCCTTCACCTTGCAAGAAGTCGCCGGATTGCATCGTGAGTCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGt > 1:1695793/1‑150 (MQ=255) gcgGTCTTGAGTGTGAGCGATCCATTGCG‑ATACTCGCCTTCACCTTGCAAGAAGTCGCCGGATTGCACCGTGAGTCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCa > 1:733869/1‑150 (MQ=255) ggTCTTGAGTGTGAGCGATCCATTGCG‑ATACTCGCCTTCACCTTGCAAGAAGTCGCCGGATTGCACCGTGAGGCTTGTCATAGACTCGTCGTGGCAGTTAATGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAAc > 1:2091033/1‑150 (MQ=255) ttGAGTGTGAGCGATCCATTGCG‑ATACTCGCCTTCACCTTGCAAGCAGTCGCCGGATTGCACCGTGAGTCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCa < 1:2068282/150‑1 (MQ=255) ttGAGTGTGAGCGATCCATTGCG‑ATACTCGCCTTCACCTTGCAAGAAGTCGCCGGATTGCACCGTGAGTCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTCAGTAAGCGCTggaaaa < 2:435437/132‑6 (MQ=255) ttGAGTGTGAGCGATCCATTGCG‑ATACTCGCCTTCACCTTGCAAGAAGTCGCCGGATTGCACCGTGAGTCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTCAGTAAGCGCTggaaaa > 1:435437/1‑127 (MQ=255) tgAGCGATCCATTGCG‑ATACTCGCCTTCACCTTGCAAGAAGTCGCAGCTGTGCATCGTGAGTCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTCAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGAc < 1:1955095/150‑1 (MQ=255) aGCGATCCATTGCG‑ATACTCGCCTTCACCTTGCAAGAAGTCGCCGGATTGCACCGTGAGTCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACgg > 1:2276234/1‑150 (MQ=255) aGCGATCCATTGCG‑ATACTCGCCTTCACCTTGCAAGAAGTCGCCGGATTGCACCGTGAGTCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACgg > 2:2203451/1‑150 (MQ=255) tCCATTGCG‑ATACTCGCCTTCACCTTGCAAGAAGTCGCCGGATTGCACCGTGAGTCTTGTCATAAAGTCATCCTTTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGt < 2:1532042/128‑1 (MQ=255) aTTGCG‑ATACTCGCCTTCACCTTGCAAGAAGTCGCCGGATTGCACCGTGAGTCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGAGACGGAGGGTAGt > 1:1237377/1‑150 (MQ=255) tACTCGCCTTCACCTTGCAAGAAGTCGCCGGATTGCACCGTGAGTCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAgg > 1:915753/1‑138 (MQ=255) tACTCGCCTTCACCTTGCAAGAAGTCGCCGGATTGCACCGTGAGTCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAgg < 2:915753/138‑1 (MQ=255) tCGCCTTCACCTTGCAAGAAGTCGCCGGATTGCACCGTGAGTCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACttt > 1:2101614/1‑150 (MQ=255) tCGCCTTCACCTTGCAAGAAGTCGCCGGATTGCACCGTGAGTCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACttt < 2:175351/150‑1 (MQ=255) tCGCCTTCACCTTGCAAGAAGTCGCCGGATTGCACCGTGAGTCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACttt < 1:1438316/150‑1 (MQ=255) cGCCTTCACCTTGCAAGAAGTCGCCGGATTGCACCGTGAGTCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTg < 1:2278817/150‑1 (MQ=255) cTTCACCTTGCAAGAAGTCGCCGGATTGCACCGTGAGTCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACg < 2:667578/116‑1 (MQ=255) cTTCACCTTGCAAGAAGTCGCCGGATTGCACCGTGAGTCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACg > 1:667578/1‑116 (MQ=255) cTTCACCTTGCAAGAAGTCGCCGGATTGCACCGTGAGTCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTGTCg > 1:1742399/1‑150 (MQ=255) ttCACCTTGCAAGAAGTCGCCGGATTGCACCGTGAGTCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTCAGTAAGCGCTggaaaa < 2:493253/100‑6 (MQ=255) cACCTTGCAAGAAGTCGCCGGATTGCACCGTGAGTCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACttt < 1:488181/143‑1 (MQ=255) aCCTTGCAAGAAGTCGCCGGATTGCACCGTGAGTCTTGTCATAAAGTCATCCTGTCAGGTAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTGTCGCCGt < 1:2203451/150‑1 (MQ=255) aCCTTGCAAGAAGTCGCCGGATTGCACCGTGAGTCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTGTCGCCGt < 2:2355196/150‑1 (MQ=255) aCCTTGCAAGAAGTCGCCGGATTGCACCGTGAGTCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTGTCGCCGt < 2:367496/150‑1 (MQ=255) cAAGAAGTCGCCGGATTGCACCGTGAGTCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGgcaagcaa < 1:1473455/99‑1 (MQ=255) cAAGAAGTCGCCGGATTGCACCGTGAGTCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGgcaagcaa > 2:1473455/1‑99 (MQ=255) aagaagTCGCCGGATTGCACCGTGAGTCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTGTCGCCGTGGCCAAt < 1:41156/150‑1 (MQ=255) agaagTCGCCGGATTGCACCGTGAGTAGTTTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTGTCGCCGTGGCCAATg < 1:2170/150‑1 (MQ=255) gTCGCCGGATTGCACCGTGAGTCTTGTCATAAAGTCATCCTCTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTGTCGCCGTGGCCAATGGcac > 2:671115/1‑148 (MQ=255) gATTGCACCGTGAGTCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTAGTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTGTCGCCGTGGCCAATGGCCTCTTcgcg > 2:732824/1‑150 (MQ=255) aCCGTGAGTCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTGTCGCCGTGGCCAATGGCCTCTTCGCGGGCGCt > 1:427786/1‑150 (MQ=255) aCCGTGAGCATTCGCATAAAGTCATCCTGTCAGGGAAAGGGCATTTACCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTGTCGCCGTGGCCAATGGCCTCTTCGCGGGCGCt > 2:91972/1‑150 (MQ=255) cGTGAGTCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTGTCGCCGTGGCCAATGGCCTCTTCGCGGGCGCTTc > 2:352524/1‑150 (MQ=255) gTGAGTCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTGTCGCCGTGGCCAATGGCCTCTTCGCGGGCGCTTca < 1:1087385/150‑1 (MQ=255) aGTCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTGTCGCCGTGGCCAATGGCCTCTTCGCGGGCGCTTCACaa < 2:2276234/150‑1 (MQ=255) tCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGgcaagc > 2:1697020/1‑70 (MQ=255) tCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGgcaagc < 1:1697020/70‑1 (MQ=255) tCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTGTCGCCGTGGCCAATGGCCTCTTCGCGGGCGCTTCACAAAc > 2:978139/1‑150 (MQ=255) tCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTGTCGCCGTGGCCAATGGCCTCTTCGCGGGCGCTTCACAAAc > 1:8703/1‑150 (MQ=255) tCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTGTCGCCGTGGCCAATGGCCTATTCGCGGGCGCTTGACAAAc > 1:533734/1‑150 (MQ=255) ttGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACttt > 2:1458070/1‑107 (MQ=255) ttGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACttt < 1:1458070/107‑1 (MQ=255) gTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTGTCGCCGTGGCCAATGGCCTCTTCGCGGGCGCTTCACAAACCTCa > 1:529232/1‑150 (MQ=255) tCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAAc < 1:1452475/73‑1 (MQ=255) tCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTGTCGCCGTGGCCAATGGCCTCTTCGCGGGCGCTTCACAAACCTCAg < 1:352524/150‑1 (MQ=255) aTAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTGTCGCCGTGGc > 1:1973989/1‑113 (MQ=255) aTAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTGTCGCCGTGGc < 2:1973989/113‑1 (MQ=255) tAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTGTCGCCGt < 2:109351/109‑1 (MQ=255) tAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTGTCGCCGt > 1:109351/1‑109 (MQ=255) aaaGTCATCCTGTCAGGGAAAGGGCATTTTCCCAAACTGACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTGTCGCCGTGGCCAATGGCCTCTTCGCGGGCGCTTCACAAACCTCAGGGcc > 1:2000374/1‑150 (MQ=255) aaaGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTGTCGCCGTgg > 1:1081302/1‑110 (MQ=255) aaaGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTGTCGCCGTgg < 2:1081302/110‑1 (MQ=255) gTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTGTCGCCGTGGCCAATGGCCTCTTCGCGGGCGCTTCACAAACCTCAGGGCCGTg > 2:1459348/1‑150 (MQ=255) gTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGAGACGGAGGGTAGTGCGGTACTTTGTCGCCGTGGCCAATGGCCTCTTCGCGGGCGCTTCTCAAACCTCAGGGCCGTg < 2:1237377/150‑1 (MQ=255) gTCATCCTGTCAGCGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTGTCGCCGTGGCCAATGGCCTCTTCGCGGGCGCTTCACAAACCTCAGGGCCGTg > 2:258281/1‑150 (MQ=255) tCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTGTCGCCGTGGCCAATGGCCTCTTCGCGGGCGCTTCACAAACCTCAGGGCCGTGa < 1:1168806/150‑1 (MQ=255) aTCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTGTCGCCGTGGCCAATGGCCTCTTCGCGGGCGCTTCACAAACCTCAGGGCCGTGATa < 2:2037831/150‑1 (MQ=255) tGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTGTCGCCGTGGCCAATGGCCTCTTCGCGGGCGCTTCACAAACCTCGGGGCCGTGATACGTc > 2:369190/1‑150 (MQ=255) tGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTGTCGCCGTGGCCAATGGCCTCTTCGCGGGCGCTTCACAAACCTCAGGGCCGt < 1:1606688/142‑1 (MQ=255) tGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTGTCGCCGTGGCCAATGGCCTCTTCGCGGGCGCTTCACAAACCTCAGGGCCGTGATACGTc > 2:1551233/1‑150 (MQ=255) gggAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTGTCGCCGTGGCCAATGGCCTCTTCGCGGGCGCTTCACAAACCTCAGGGCCGTGATACGTCTGTgg > 2:821144/1‑150 (MQ=255) gggAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTGTCGCCGTGGCCAATGGCCTCTTCGCGGGCGCTTCACAAACCTCAGGGCCGTGATACGTCTGTgg < 1:1459348/150‑1 (MQ=255) aGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTGTCGCCGTGGCCAATGGCCTCTTCGCGGGCGCTTCACAAACCTCAGGGCCGTGATACGTCTGTGGGAGCg < 2:2101614/150‑1 (MQ=255) gggCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTGTCGCCGTGGCCAATGGCCTCTTCGCGGGCGCTTCACAAACCTCAGGGCCGTGATACGTCTGTGGGAGCgg > 2:878267/1‑150 (MQ=255) gggCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTGTCGCCGTGGCCAATGGCCTCTTCGCGGGCGCTTCACAAACCTCAGGGCCGTGATACGTCTGTGGGAGCgg < 1:978139/150‑1 (MQ=255) cATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGNATTGCGACGGAGGGTAGTGCGGTACTTTGTCGCCGTGGCCAATGGCCTCTTCGCGGGCGCTTCACAAACCTCAGGGCCGTGATACGTCTGTGGGAGCGGGCg > 1:651486/1‑150 (MQ=255) aTTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTGTCGCCGTGGCCACTGGCCTCTTCGCGGGCGCTTCACAAACCCCAGGGCCGTGATACGTCTGTGGGAGCGGGCGt < 1:1914617/150‑1 (MQ=255) aTTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTGTCGCCGTGGCCAATGGCCTCTTCGCGGGCGCTTCACAAACCTCAGGGCCGTGATACGTCTGTGGGAGCGGGCGt > 1:1700400/1‑150 (MQ=255) tCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTGTCGCCGTGGCCAATGGCCTCTTCGCGGGCGCTTCACAAACCTCAGGGCCGTGATACGTCTGTGGGAGCGGGCGTGccc < 2:1695793/150‑1 (MQ=255) cAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTGTCGCCGTGGCCAATGGCCTCTTCGCGGGCGCTTCACAAACCTCAGGGCCGTGATACGTCTGTGGGAGCGGGCGTGCCcgc > 2:39089/1‑150 (MQ=255) cgcTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTGTCGCCGTGGCCAATGGCCTCTTCGCGGGCGCTTCACAAACCTCGGGGCCGTGATACGTCTGTGGGAGCGGGCACGCCcgctcc < 1:369190/150‑4 (MQ=255) cgcTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTGTCGCCGTGGCCAATGGCCTCTTCGCGGGCGCTTCACAAACCTCAGGGCCGTGATACGTCTGTGGGAGCGGGCGTGCCCGCgaa > 1:2050958/1‑150 (MQ=255) tACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTGTCGCCGTGGCCAATGGCCTCTTCGCGGGCGCTTCACAAACCTCAGGGCCGTGATACGTCTGTGGGAGCGGGCGTGCCCGCGAAGAAt < 2:2086817/150‑1 (MQ=255) tGAGCGCTGCCCCGGCAAGCACGTCAACGGCATGGCGACGGAGGGTAGGGCGGTACTTTGTCGCCGTGGCCAATGGCCTCTTCGCGGGCGCTTCACATACCTCAGGGCCGTGATACGTCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCa < 2:651486/150‑1 (MQ=255) tGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTGt > 1:2178540/1‑61 (MQ=255) tGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTGTCGCCGTGGCCAATg < 1:2235317/75‑1 (MQ=255) tGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTGTCGCCGTGGCCAATg > 2:2235317/1‑75 (MQ=255) tGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTGTCGCCGTGGCCAATGGCCTCTTCGCGGGCGCTTCACAAACCTCAGGGCCGTGATACGTCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCa > 2:218361/1‑150 (MQ=255) tGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTGTCGCCGTGGCCAATGGCCTCTTCGCGGGCGCTTCACAAACCTCAGGGCCGTGATACGTCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCa < 2:2054918/150‑1 (MQ=255) gAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTGTCGCCGTGGCCAATGGCCTCTTCGCGGGCGCTTCACAAACCTCAGGGCCGTGATACGTCTGTGGGAGCGGGCGTGCCCGCGAAGAATc > 1:1403007/1‑147 (MQ=255) gAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTGTCGCCGTGGCCAATGGCCTCTTCGCGGGCGCTTCACAAACCTCAGGGCCGTGATACGTCTGTGGGAGCGGGCGTGCCCGCGAAGAATc < 2:1403007/147‑1 (MQ=255) | GCTCACCGGGTGAGGGGCTGCGCGCGGTCTTGAGTGTGAGCGATCCATTGCG‑ATACTCGCCTTCACCTTGCAAGAAGTCGCCGGATTGCACCGTGAGTCTTGTCATAAAGTCATCCTGTCAGGGAAAGGGCATTTTCCAGCGCTTACTGAGCGCTGCCCCGGCAAGCAAGTCAACGGCATTGCGACGGAGGGTAGTGCGGTACTTTGTCGCCGTGGCCAATGGCCTCTTCGCGGGCGCTTCACAAACCTCAGGGCCGTGATACGTCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCA > NC_002947/2073926‑2074222 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |