| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,165,022 | C→T | 6.1% | V187I (GTA→ATA) ‡ | PP_1920 ← | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,165,022 | 0 | C | T | 6.1% | 333.9 / 8.4 | 114 | V187I (GTA→ATA) ‡ | PP_1920 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (51/56); new base T (2/5); total (53/61) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.47e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.61e-01 | |||||||||||
Only 100 of 114 total aligned reads displayed.
GCAGTGGTAAAGACTTCATAGAACGTCGTGAAGTCTTTGTTGTACTCGATCATATCTTCGAAGGAGTTGGTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGATGCTTCCTCAGTAAACGAGCCATGTCCAAACCAATGATGCAAAAGCGGGTCGGTGTAGTTTTGCTCGCAATCACTCCAGCGCCAGTTGACAATTCC > NC_002947/2164877‑2165166 | ggTAAAGACTTCATAGAACGTCGTGAAGTCTTTGTTGTACTCGATCATATCTTCGAAGGAGTTGGTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTGTAGCCATgtt < 1:2362765/150‑3 (MQ=255) tAAAGACTTCAGAGGACGTCGTGAAGTCTTTGTTGTACGGGATCAGATCTTCGAAGGAGTTGGTGCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCGGCATCAACGGGCAGAATGTCCAACATGGCTACAGCCATGCtgt < 2:104305/150‑3 (MQ=255) aaaGACTTCATAGAACGTCGTGAAGTCTTTGTTGTACTCGATCATATCTTCGAAGGAGTTGGTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTGTAGCCATgttgga < 2:1299125/150‑6 (MQ=255) aGACTTCATAGAACGTCGTGAAGTCTTTGTTGTACTCGCTCATATCTTCGAAGGAGTTGGTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTa < 1:508797/150‑1 (MQ=255) aGACTTCATAGAACGTCGTGAAGTCTTTGTTGTACTCGATCATATCTTCGAAGGAGTTGGTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTa < 2:208105/150‑1 (MQ=255) aGACGTCATAGAAGGTCGTGAAGTCTTTGTTGTCCGCGGTCATATCTTCGAAGGAGATGATCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCGAACATGGCTGTAGCCATgttggaga < 2:571853/150‑8 (MQ=255) ttCATAGAACGTCGTGAAGTCTTTGTTGTACTCGATCATATCTTCGAAGGAGTTGGTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAgaga > 2:2092046/1‑150 (MQ=255) cATAGAACGTCGTGAAGTCTTTGTTGTACTCGATCATATCTTCGAAGGAGTTGGTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGAtt < 1:2092046/150‑1 (MQ=255) aTAGAACGTCGTGAAGTCTTGGTTGTACTCGATCATATCTTCGAAGGAGTTGGTCCAACCGCCACCAATAAGGTGAGTAATATCGAGGGTGCACTCCTCATGAACGGGCAGAATCTCCAACATGGCTACAGCCATGGTTTCTAGAGATTg > 1:276425/1‑150 (MQ=255) aaCGTCGTGAAGTCTTTGTTGTACTCGATCATATCTTCGAAGGAGTTGGTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCaa < 1:1118539/150‑1 (MQ=255) aaCGTCGTGAAGTCTTTGTTGTACTCGATCATATCTTCGAAGGAGTTGGTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCaa < 2:18518/150‑1 (MQ=255) tGAAGTCTTTGTTGTACTCGATCATATCTTCGAAGGAGTTGGTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGc > 2:110170/1‑150 (MQ=255) aaGTCTTTGTTGTACTCGATCATATCTTCGAAGGAGTTGGTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCg > 1:507365/1‑150 (MQ=255) gTCTTTGTTGTACTCGATCATATCTTCGAAGGAGTTGGTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGt < 2:408085/150‑1 (MQ=255) tttGTTGTACTCGATCATATCTTCGAAGGAGTTGGTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTa < 1:1732520/125‑1 (MQ=255) tttGTTGTACTCGATCATATCTTCGAAGGAGTTGGTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTa > 2:1732520/1‑125 (MQ=255) tttGTTGTACTCGATCATATCTTCGAAGGAGTTGGTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATc > 1:1046955/1‑150 (MQ=255) ttgttgTACTCGATCATATCTTCGAAGTAGTTGGTCCACCCGCCACCAATGAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCAt < 2:1130147/116‑1 (MQ=255) ttgttgTACTCGATCATATCTTCGAAGGAGTTGGTCCACCCGCCACCAATGAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCAt > 1:1130147/1‑116 (MQ=255) ttgttgTACTCGATCATATCTTCGAAGGAGTTGGTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCg > 1:1160564/1‑150 (MQ=255) gttgtACTCGATCATATCTTCGAAGGAGTTGGTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTg < 2:1046955/150‑1 (MQ=255) ttgtACTCGATCATATCTTCGAAGGAGTTGGTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTa < 2:1219043/121‑1 (MQ=255) ttgtACTCGATCATATCTTCGAAGGAGTTGGTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTa > 1:1219043/1‑121 (MQ=255) tgtACTCGATCATATCTTCGAAGGAGTTGGTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGaa < 1:616210/150‑1 (MQ=255) tgtACTCGATCATATCTTCGAAGGAGTTGGTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGaa < 1:110170/150‑1 (MQ=255) tCGATCATATCTTCGAAGGAGTTGGTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCg < 2:1090252/135‑1 (MQ=255) tCGATCATATCTTCGAAGGAGTTGGTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCg < 1:566304/135‑1 (MQ=255) tCGATCATATCTTCGAAGGAGTTGGTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCg > 2:566304/1‑135 (MQ=255) tCGATCATATCTTCGAAGGAGTTGGTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCg > 1:1090252/1‑135 (MQ=255) tCGATCATATCTTCGAAGGAGTTGGTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGAt < 2:1019495/150‑1 (MQ=255) gATCATATCTTCGAAGGAGTTGGTCCACNNGCCACCAATAAGATNANTNATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCGACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGCACTGATgg > 1:1243013/1‑149 (MQ=255) gATCATATCTTCGAAGGAGTTGGTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATTAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGc > 1:1774489/1‑122 (MQ=255) gATCATATCTTCGAAGGAGTTGGTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATTAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGc < 2:1774489/122‑1 (MQ=255) gATCATATCTTCGAAGGAGTTGGTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCttt > 2:404380/1‑110 (MQ=255) gATCATATCTTCGAAGGAGTTGGTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCttt < 1:404380/110‑1 (MQ=255) gATCATATCTTCGAAGGAGTTGGTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGATGc > 2:2339763/1‑150 (MQ=255) gATCATATCTTCGAAGGAGTTGGTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGATGc > 1:2015228/1‑150 (MQ=255) aTCATATCTTCGAAGGAGTTGGTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTa > 1:1240429/1‑112 (MQ=255) aTCATATCTTCGAAGGAGTTGGTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTa < 2:1240429/112‑1 (MQ=255) tCATATCTTCGAAGGAGATTTGCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGATGCtt > 1:2372998/1‑150 (MQ=255) cATATCTTCGAAGGAGTGGGTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAAGCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGTTGCTTc < 2:42828/150‑1 (MQ=255) tatCTTCGAAGGAGTTGGTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGATGCTTCCt > 1:2067650/1‑150 (MQ=255) tCTTCGAAGGAGTTGGTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGCGAACTGACGCCTcccaa < 2:1243013/150‑4 (MQ=255) cTTCGAAGGAGTTGGTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTGTAGCCATgtt > 2:1942061/1‑98 (MQ=255) cTTCGAAGGAGTTGGTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTGTAGCCATgtt < 1:1942061/100‑3 (MQ=255) ttCGAAGGAGTTGGTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGATGCTTCCTCAGt > 1:2118094/1‑150 (MQ=255) cGAAGGAGTTAGGCCACCCGCCACCGATAAGATTAGTAATATCGAGGGTGCAATCAGCATCAACGGGCAGAGTCTCCAACATGGCTACAGCCATGCCTTCTAGAGATTGGCAAGTAAAGCCGGTATCGTGAACTGATGCTTCCTCAGTaa < 2:276425/150‑1 (MQ=255) gAAGGAGTTGGTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGTGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGATGCTTCCTCAGTaaa < 1:461747/150‑1 (MQ=255) gAAGGAGTTGGTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGATGCTTCCTCAGTaga > 1:1069803/1‑148 (MQ=255) gAAGGAGTTGGTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGATGCTTCCTCAGTaaa > 1:1661605/1‑150 (MQ=255) gAAGGAGTTGGTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGATGCTTCCTCAGTaaa > 1:1294599/1‑150 (MQ=255) gAAGGAGTTGGTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGACGGCACCGCGACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGATGCTTCCTCAGTaaa < 2:2372998/150‑1 (MQ=255) aGGAGTTGGTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGc < 1:1699108/117‑1 (MQ=255) aGGAGTTGGTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGc > 2:1699108/1‑117 (MQ=255) gTTGGTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGATGCTTCCTCAGTAAACGa < 1:562235/147‑1 (MQ=255) gTTGGTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGATGCTTCCTCAGTAAACGa > 2:562235/1‑147 (MQ=255) gTTGGTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGATGCTTCCTCAGTAAACGAGcc > 2:1867164/1‑150 (MQ=255) gTTGGTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGATTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGATGCTTCCTCAGTAAACGa > 1:2006759/1‑147 (MQ=255) gTTGGTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGATTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGATGCTTCCTCAGTAAACGa < 2:2006759/147‑1 (MQ=255) gTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCttt > 1:461549/1‑88 (MQ=255) gTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCttt < 2:461549/88‑1 (MQ=255) gTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGc < 1:165230/109‑1 (MQ=255) gTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGATGCTTCCTCAGTAAACGAGCCATGt > 1:277550/1‑150 (MQ=255) gATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGATGCTTCCTCAGTAAACGAGCCATGTCCAAACCAATGATGCaaaa > 2:1654630/1‑150 (MQ=255) aTCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGATGCTTCCTCAGTAAACGAGCCATGTCCAAACCAATGATGCAAAAg > 1:1793762/1‑150 (MQ=255) tCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGATGCTTCCTCAGTAAACGAGCCATGTCCAAACCAATGATGCAAAAGc < 2:1661605/150‑1 (MQ=255) aGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGATGCTTCCTCAGTAAACGAGCCATGTCCAAACCAATGATGCAAAAGCgg < 2:789587/150‑1 (MQ=255) tAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGATGCTTCCTCAGTAAACGAGCCATGTCCAAACCAATGATGCAAAAGCGGGt > 2:1254822/1‑150 (MQ=255) atCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGATGCTTCCTCAGTAAACGAGCCATGTCCAAACCAATGATGCAAAAGCGGGTCGgt < 2:1160564/150‑1 (MQ=255) tCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGATGCTTCCTCAGTAAACGAGCCATGTCCAAACCAATGATGCAAAAGCGGGTCGgtg > 1:1196649/1‑150 (MQ=255) gAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGATGCTTCCTCAGTAAACGAGCCATGTCCAAACCAATGATGCAAAAGCGGGTCGGTGTa > 1:478765/1‑150 (MQ=255) tGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGATGCTTCCTCAGTAAACGAGCCATGTCCAAACCAat > 1:35020/1‑123 (MQ=255) tGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGATGCTTCCTCAGTAAACGAGCCATGTCCAAACCAat < 2:35020/123‑1 (MQ=255) tGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGATGCTTCCTCAGTAAACGAGCCATGTCCAAACCAATGATGCAAAAGCGGGTCGGTGTAGtttt < 2:478765/150‑1 (MQ=255) gCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGATGCTTCCTCAGTAAACGAGcc > 2:1033931/1‑108 (MQ=255) gCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGATGCTTCCTCAGTAAACGAGcc < 1:1033931/108‑1 (MQ=255) cTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCg < 1:275090/70‑1 (MQ=255) cTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCg > 2:275090/1‑70 (MQ=255) cTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGATGCTTCCTCAGTAAACGAGCCATGTCCAAACCAATGATGCAAAAGCGGGTCGGTGTAGTTTTGCTc < 2:2198007/150‑1 (MQ=255) cTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGATGCTTCATCAGTAAACGAGCCATGTCCAAACCAATGATGCAAAAGCGGGTCGGTGTAGTTTTGCTc < 2:507365/150‑1 (MQ=255) tCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGATGCTTcc > 2:108550/1‑90 (MQ=255) tCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGATGCTTcc < 1:108550/90‑1 (MQ=255) tCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGC‑TTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGATGCTTCCTCAGTAAACGAGCCATGTCCAAACCAATGATGCAAAAGCGGGTCGGTGTAGTTTTGCTCGc > 1:844151/1‑150 (MQ=255) cGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGC‑TTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGATGCTTCCTCAGTAAACGAGCCATGTCCAAACCAATGATGCAAAAGCGGGTCGGTGTAGTTTTGCTCGCaa < 2:844151/150‑1 (MQ=255) cATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGATGCTTCCTCAGTAAACGAGCCATGTCCAAACCAATGATGCAAAAGCGGGTCGGTGTAGTTTTGCTCGCAAt < 2:1793762/150‑1 (MQ=255) gCAGAATTTCCAACATGGCTACAGCCATGCTCTCTAGAGATTGCCAAGGAAAGCCGGTATCGTGAACTGATGCTTCCTCAGTAAACGAGCCATGTCCAAAc > 2:8259/1‑101 (MQ=255) gCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGATGCTTCCTCAGTAAACGAGCCATGTCCAAAc < 1:8259/101‑1 (MQ=255) gCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGATGCTTCCTCAGTAAACGAGCCATGTCCAAACCAatgat > 1:2315875/1‑108 (MQ=255) gCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGATGCTTCCTCAGTAAACGAGCCATGTCCAAACCAatgat < 2:2315875/108‑1 (MQ=255) gCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGATGCTTCCTCAGTAAACGAGCCATGTCCAAACCAATGATGCAAAAGCGGGTCGGTGTAGTTTTGCTCg > 1:473223/1‑137 (MQ=255) gCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGATGCTTCCTCAGTAAACGAGCCATGTCCAAACCAATGATGCAAAAGCGGGTCGGTGTAGTTTTGCTCg < 2:473223/137‑1 (MQ=255) aGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGATGCTTCCTCAGTAAACGAGCCATGTCCAAACCAATGATGCAAAAGCGGGTCGGTGTAGTTTTGCTCGCaa < 1:920601/138‑1 (MQ=255) aGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGATGCTTCCTCAGTAAACGAGCCATGTCCAAACCAATGATGCAAAAGCGGGTCGGTGTAGTTTTGCTCGCaa > 2:920601/1‑138 (MQ=255) ctcCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGATGCTTCCTCAGTAAACGAGCCATGTCCAAACCAATGATGCAAAAGCGGGTCGGTGTAGTTTTGCTCGCAATCACTCCAGCGCCAGtt < 1:1254822/150‑1 (MQ=255) cAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGATGCTTCCTCAGTAAACGAGCCATGTCCAAACCAATGATGCAAAAGCGGGTCGGTGTa > 1:1673627/1‑117 (MQ=255) cAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGATGCTTCCTCAGTAAACGAGCCATGTCCAAACCAATGATGCAAAAGCGGGTCGGTGTa < 2:1673627/117‑1 (MQ=255) cATGGCTGTAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGATGCTTCCTCAGTAAACGAGCCATGTCCAAACCAat < 1:1918/92‑1 (MQ=255) cATGGCTGTAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGATGCTTCCTCAGTAAACGAGCCATGTCCAAACCAat > 2:1918/1‑92 (MQ=255) tGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGATGCTTCCTCAGTAGACGAGCCATGTCCAAACCAATGATGCAAAAGCGGGTCGGTGTAGTTTTGCTCGCAATCACTCCAGCGCCAGTTGACAATTc < 2:1069803/150‑1 (MQ=255) ggCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGATGCTTCCTCAGTAAACGAGCCATGTCCAAACCAATGATGCAAAAGCGGGTCGGTGTAGTTTTGCTCGCAATCACTCCAGCGCCAGTTGACAATTcc > 1:741831/1‑150 (MQ=255) | GCAGTGGTAAAGACTTCATAGAACGTCGTGAAGTCTTTGTTGTACTCGATCATATCTTCGAAGGAGTTGGTCCACCCGCCACCAATAAGATCAGTAATATCGAGGGTGCACTCCGCATCAACGGGCAGAATCTCCAACATGGCTACAGCCATGCTTTCTAGAGATTGGCAAGGAAAGCCGGTATCGTGAACTGATGCTTCCTCAGTAAACGAGCCATGTCCAAACCAATGATGCAAAAGCGGGTCGGTGTAGTTTTGCTCGCAATCACTCCAGCGCCAGTTGACAATTCC > NC_002947/2164877‑2165166 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |