| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,227,465 | T→A | 10.1% | intergenic (‑21/‑426) | PP_1964 ← / → holB | dGMP/dTMP/dhydroxyCMP kinase/DNA polymerase III subunit delta' |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,227,465 | 0 | T | A | 10.1% | 328.2 / 20.1 | 107 | intergenic (‑21/‑426) | PP_1964/holB | dGMP/dTMP/dhydroxyCMP kinase/DNA polymerase III subunit delta' |
| Reads supporting (aligned to +/- strand): ref base T (46/50); new base A (5/6); total (51/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 107 total aligned reads displayed.
TGGCAACCTGCTTTGAGCGGATCAGCTAGGGCATATGTCGCGACCTCAGGGTGCTCCATGAGCATGGAAGCGACGGTGTCTTTACCGGATCGAGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGCCTATGTTTACATTTACTCAAGAACGAATACAAGACGCCACCTATGCCTATCAGGGCGGCGGTCGTGGTCTGTCGGTCGAGCGTA > NC_002947/2227320‑2227611 | tGGCAACCTGCTTTGAGCGGATCAGCTAGGGCATATGTCGCGACCTCAGGGTGCTCCATGAGCATGGAAGCGACGGTGTCTTTACCGGATCGAGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCg < 2:590776/150‑1 (MQ=255)tGGCAACCTGCTTTGAGCGGATCAGCTAGGGCATATGTCGCGACCCCAGGGTGCCACACGCCGACAGCATCCACGCTGTTCGTTCCCGTTCGAGCTACGGTGGCGTTTTTGATGATGGCTGGCATTTTTGGCTCCAGGCCCCGAATTTCg < 2:1478611/150‑1 (MQ=255) ccTGCTTTGAGCGGATCAGCTAGGGCATATGTCGCGACCTCAGGGTGCTCCATGAGCATGGAAGCGACGGTGTCTTTACCGGATCGAGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAAATTCggggcct < 2:172340/150‑4 (MQ=255) cTGCTTTGAGCGGATCAGCTAGGGCATATGTCGCGACCTCAGGGTGCTCCATGAGCATGGAAGCGACGGTGTCTTTACCGGATCGAGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTa > 1:1201904/1‑150 (MQ=255) gCTTTGAGCGGATCAGCTAGGGCATATGTCGCGACCTCAGGGTGCTCCATGAGCATGGAAGCGACGGTGTCTTTACCGGATCGAGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAAATTCggggcctgga < 2:1193121/150‑7 (MQ=255) cTTTGAGCGGATCAGCTAGGGCATATGTCGCGACCTCAGGGTGCTCCATGAGCATGGAAGCGACGGTGTCTTTACCGGATCGAGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTagag > 2:922281/1‑150 (MQ=255) ttGAGCGGATCAGCTAGGGCATATGTCGCGACCTCAGGGTGCTCCATGAGCATGGAAGCGACGGTGTCTTTACCGGATCGAGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAggg < 1:1533165/150‑1 (MQ=255) gAGCGGATCAGCTAGGGCATATGTCGCGACCTCAGGGTGCTCCATGAGCATGGAAGCGACGGTGTCTTTACCGGATCGAGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGAt < 1:237440/150‑1 (MQ=255) gAGCGGATCAGCTAGGGCATATGTCGCGACCTCAGGGTGCTCCATGAGCATGGAAGCGACGGTGTCTTTACCGGATCGAGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGAt < 2:1491857/150‑1 (MQ=255) aGCGGATCAGCTAGGGCATATGTCGCGACCTCAGGGTGCTCCATGAGCATGGAAGCGACGGTGTCTTTACCGGATCGAGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATg < 2:2097288/150‑1 (MQ=255) cGGATCAGCTAGGGCATATGTCGCGACCTCAGGGTGCTCCATGAGCATGGAAGCGACGGTGTCTTTACCGGATCGAGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTa < 2:734916/150‑1 (MQ=255) tCAGCTAGGGCATATGTCGCGACCTCAGGGTGCTCCATGAGCATGGAAGCGACGGTGTCTTTACCGGATCGAGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAAATTCggggcctgga > 2:1208805/1‑132 (MQ=255) tCAGCTAGGGCATATGTCGCGACCTCAGGGTGCTCCATGAGCATGGAAGCGACGGTGTCTTTACCGGATCGAGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAAATTCggggcctgga < 1:1208805/138‑7 (MQ=255) aGCTAGGGCATATGTCGCGACCTCAGGGTGCTCCATGAGCATGGAAGCGACGGTGTCTTTACCGGATCGAGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTc < 2:489927/150‑1 (MQ=255) cTAGGGCATATGTCGCGACCTCAGGGTGCTCCATGAGCATGGAAGCGACGGTGTCTTTACCGGATCGAGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCAt > 2:2093404/1‑150 (MQ=255) tAGGGCATATGTCGCGACCTCAGGGTGCTCCATGAGCATGGAAGCGACGGTGTCTTTACCGGATCGAGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATg > 1:1114892/1‑150 (MQ=255) tCGCGACCTCAGGGTGCTCCATGAGCATGGAAGCGACGGTGTCTTTACCGGATCGAGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAggg > 1:1654197/1‑125 (MQ=255) tCGCGACCTCAGGGTGCTCCATGAGCATGGAAGCGACGGTGTCTTTACCGGATCGAGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAggg < 2:1654197/125‑1 (MQ=255) cgcgACCTCAGGGTGCTCCATGAGCATGGAAGCGACGGTGTCTTTACCGGATCGAGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTa < 1:2024300/150‑1 (MQ=255) gcgACCTCAGGGTGCTCCATGAGCATGGAAGCGACGGTGTCTTTACCGGATCGAGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAg > 1:2325433/1‑150 (MQ=255) gcgACCTCAGGGTGCTCCATGAGCATGGAAGCGACGGTGTCTTTACCGGATCGAGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAg > 1:800047/1‑150 (MQ=255) aCCTCAGGGTGCTCCATGAGCATGGAAGCGACGGTGTCTTTACCGGATCGAGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTaa < 1:1125574/150‑1 (MQ=255) ccTCAGGGTGCTCCATGAGCATGGAAGCGACGGTGTCTTTACCGGATCGAGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAg < 2:1114892/150‑1 (MQ=255) tCAGGGTGCTCCATGAGCATGGACGCGACGGTGTCTTTACCGGATCGAGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTagag < 2:882237/115‑1 (MQ=255) tCAGGGTGCTCCATGAGCATGGAAGCGACGGTGTCTTTACCGGATCGAGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTagag > 1:882237/1‑115 (MQ=255) ggTGCTCCATGAGCATGGAAGCGACGGTGTCTTTACCGGATCGAGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGaa > 1:38706/1‑121 (MQ=255) ggTGCTCCATGAGCATGGAAGCGACGGTGTCTTTACCGGATCGAGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGaa < 2:38706/121‑1 (MQ=255) gTGCTCCATGAGCATGGAAGCGACGGTGTCTTTACCGGATCGAGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGta < 2:800047/150‑1 (MQ=255) tGCTCCATGAGCATGGAAGCGACGGTGTCTTTACCGGATCGAGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCgg > 1:1688001/1‑100 (MQ=255) tGCTCCATGAGCATGGAAGCGACGGTGTCTTTACCGGATCGAGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCgg < 2:1688001/100‑1 (MQ=255) tGCTCCATGAGCATGGAAGCGACGGTGTCTTTACCGGATCGAGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAAATTCgggg > 1:205807/1‑102 (MQ=255) tGCTCCATGAGCATGGAAGCGACGGTGTCTTTACCGGATCGAGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAAATTCgggg < 2:205807/102‑1 (MQ=255) cTCCATGAGCATGGAAGCGACGGTGTCTTTACCGGATCGAGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTataa < 2:1931668/150‑1 (MQ=255) cATGAGCATGGAAGCGACGGTGTCTTTACCGGATCGAGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGaa > 1:1321814/1‑114 (MQ=255) cATGAGCATGGAAGCGACGGTGTCTTTACCGGATCGAGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGaa < 2:1321814/114‑1 (MQ=255) cATGAGCATGGAAGCGACGGTGTCTTTACCGGATCGAGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGtat < 2:2060387/145‑1 (MQ=255) tGAGCATGGAAGCGACGGTGTCTTTACCGGATCGAGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGc > 2:1195748/1‑150 (MQ=255) tGGAAGCGACGGTGTCTTTACCGGATCGAGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGCCTATGt > 2:626230/1‑150 (MQ=255) ggAAGCGACGGTGTCTTTACCGGATCGAGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGCCTATGtt > 2:1438540/1‑150 (MQ=255) aaGCGACGGTGTCTTTACCGGATCGAGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGCCTATGTTTa > 2:1359808/1‑150 (MQ=255) gCGACGGTGTCTTTACCGGATCGAGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGCCTATGTTTACa > 2:97619/1‑150 (MQ=255) gCGACGGTGTCTTTACCGGATCGAGCTACTGCGGCGAGGCCAATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGCCTATGTTTACa < 1:2343201/150‑1 (MQ=255) gACGGTGTCTTTACCGGATCGAGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGCCTATGTTTACAtt < 1:97619/150‑1 (MQ=255) ggTGTCTTTACCGGATCGAGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGCCTATGTTTACATTTAc < 1:1438540/150‑1 (MQ=255) ggTGTCTTTACCGGATCGAGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGCCTATGTTTACATTTAc < 1:922281/150‑1 (MQ=255) tgtCTTTACCGGATCGAGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGCCTATGTTTACATTTACTc < 1:1359808/150‑1 (MQ=255) tttACCGGATCGAGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGCCTATGTTTACATTTACTCAAGa > 2:60699/1‑150 (MQ=255) aCCGGATCGAGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGta > 2:382806/1‑117 (MQ=255) aCCGGATCGAGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGta < 1:382806/117‑1 (MQ=255) ccGGATCGAGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGCCTATGTTTACATTTACTCAAGAACGa > 2:128368/1‑150 (MQ=255) aTCGAGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGCCTATGTTTACATTTACTCAAGAACGAATAc > 1:242813/1‑150 (MQ=255) cGAGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGCCTATGTTTACATTTACTCAAGAACGAATACaa < 2:1212711/150‑1 (MQ=255) gAGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGCCTATGTTTACATTTACTCAAGAACGAATACAAg > 2:1080269/1‑150 (MQ=255) aGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTataa < 1:2134009/111‑1 (MQ=255) aGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTataa > 2:2134009/1‑111 (MQ=255) aGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGCCTATGTTTACATTTACTCAAGAACGAATACACGa < 2:1201904/150‑1 (MQ=255) aGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGCCTATGTTTACATTTACTCAAGAACGAATACAAGa < 1:128368/150‑1 (MQ=255) tGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTataa > 1:1001507/1‑105 (MQ=255) tGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTataa < 2:1001507/105‑1 (MQ=255) tGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGCCTATGTTTACATTTACTCAAGAACGAATACAAGACGCCAc > 2:1818759/1‑150 (MQ=255) gAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGCCTATGTTTACATTTACTCAAGAACGAATACAAGACGCCACCTATGc < 1:1205702/150‑1 (MQ=255) gAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGCCTATGTTTACATTTACTCAAGAACGAATACAAGACGCCACCTATGc < 1:1535849/150‑1 (MQ=255) ggCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGCCTATGTTTACATTTACTCAAGAACGAATACAAGACGCCACCTATGCCt > 1:1817069/1‑150 (MQ=255) gCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGc > 1:1365410/1‑101 (MQ=255) gCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGc < 2:1365410/101‑1 (MQ=255) cGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGCCTATGTTTACATTTACTCAAGAACGAATACAAGACGCCACCTATGCCTATc > 1:1240585/1‑150 (MQ=255) gatgatGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGCCTATg < 2:730331/103‑1 (MQ=255) gatgatGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGCCTATg > 1:730331/1‑103 (MQ=255) gatgatGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGCCTATGTTTACATTTACTCAAGAACGAATACAAGACGCCACCTATGCCt < 2:1781103/146‑1 (MQ=255) gatgatGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGCCTATGTTTACATTTACTCAAGAACGAATACAAGACGCCACCTATGCCt > 1:1781103/1‑146 (MQ=255) gatgatGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGCCTATGTTTACATTTACTCAAGAACGAATACAAGACGCCACCTATGCCTATCa > 2:2118642/1‑150 (MQ=255) tgatgGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGCCTATGTTTACATTTACTCAAGAACGAATACAAGACGCCACCTATGCCTATCAgg < 2:2325433/150‑1 (MQ=255) atgGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGCCTATGTTTACATTTACTCAAGAACGAATACAAGACGCCACCTATGCCTATCAGggc < 1:996758/150‑1 (MQ=255) ggCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGCCTATGTTTACATTTACTCAAGAACGAATACAAGACGCCACCTATGCCTATCAGGGCGGCGGt > 1:1444851/1‑150 (MQ=255) gCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGTCCTATGTTTACATTTACTCAAGAACGAATAc < 1:467139/117‑1 (MQ=255) gCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGCCTATGTTTACATTTACTCAAGAACGAATACAAGACGCCACCTATg < 1:535831/132‑1 (MQ=255) gCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGCCTATGTTTACATTTACTCAAGAACGAATACAAGACGCCACCTATg > 2:535831/1‑132 (MQ=255) gCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGCCTATGTTTACATTTACTCAAGAACGAATACAAGACGCCACCTATGCCTATCAGGGCGGCGGTc < 2:1473860/150‑1 (MQ=255) gCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGATAGAGGGATGTAGAACTCATGTTTCCATTCTTAGTAAAGAACGTATAATAGGCCTATATTTACATTTACTCAAGAACGAATACAAGACTCCACCTATGCCTATCAGGGCGGCGGTc > 2:495527/1‑150 (MQ=255) aTTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGCCTATGTTTACATTTACTCAAGAACGAATACAAGACGCCACCTATGCCTATCAGGGCGGCGGTCGt > 1:1795229/1‑150 (MQ=255) tttttGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGCCTATGTTTACATTTACTCAAGAACGAATACAAGACGc < 2:187235/121‑1 (MQ=255) tttttGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGCCTATGTTTACATTTACTCAAGAACGAATACAAGACGc > 1:187235/1‑121 (MQ=255) tttttGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGCCTATGTTTACATTTACTCAAGAACGAATACAAGACGCCACCTATGCCTATCAGGGCGGCGGTCGTg < 1:1195748/150‑1 (MQ=255) tttttGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGCCTATGTTTACATTTACTCAAGAACGAATACAAGACGCCACCTATGCCTATCAGGGCGGCGGTCGTg < 1:2093404/150‑1 (MQ=255) tttttGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGCCTATGTTTACATTTACTCAAGAACGAATACAAGACGCCACCTATGCCTATCAGGGCGGCGGTCGTg > 2:1752989/1‑150 (MQ=255) gCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGCCTATGTTTACATTTACTCAAGAACGAATACAAGACGCCACCTATGCCTATCAGGGCGGCGGTCGTGGTCTgt < 2:1240585/150‑1 (MQ=255) ctctaacccccGAAATTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGCCTATGTTTACATTTACTCAAGAACGAATACAAGACGCCACCTATGCCTATCAGGGCGGCGGTCGTGGTCTgtc > 1:903568/8‑150 (MQ=255) cAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGCCTATGTTTACATTTACTCAAGAACGAATACAAGACGCCACCTATGCCTATCAGGGCGGCGGTCGTGGTCTgtcggt < 1:1752989/150‑1 (MQ=255) aGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGCCTATGTTTACATTTACTCAAGAACGAATACAAGACGCCACCTATGCCTATCAGGGCGGCGGTCGTGGTCTgtcggtc < 1:626230/150‑1 (MQ=255) aGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGAATAATAGGCCTATGTTTACATTTACTCAAGAACGAATACAAGACGCCACCTATGCCTATCAGGGCGGCGGTCGTGGTCTgtcggtc > 1:362267/1‑150 (MQ=255) acccccGAAATTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGc > 1:1254134/3‑72 (MQ=255) gCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTa < 2:69786/51‑1 (MQ=255) gCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTa > 1:69786/1‑51 (MQ=255) gCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGCCTATGTTTACATTTACTCAAGAACGAATACAAGACGCCACCTATGCCTATCAGGGCGGCGGTCGTGGTCTGTCGGTCGa > 2:2143130/1‑150 (MQ=255) ccccGAAATTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGCCTATGTTTACATTTACTCAAGAACGAATACAAGACGCCACCTATGCCTATCAGggcggc > 2:778150/1‑129 (MQ=255) cccGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGCCTATGTTTACATTTACTCaa > 2:1870557/1‑89 (MQ=255) cccGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGCCTATGTTTACATTTACTCAAGAACGAATACAAGACGCCACCTATGCCTATCAGGGCGGCGGTCGTGGTCTgtcggt > 1:1760881/1‑145 (MQ=255) cccGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGCCTATGTTTACATTTACTCAAGAACGAATACAAGACGCCACCTATGCCTATCAGGGCGGCGGTCGTGGTCTgtcggt < 2:1760881/145‑1 (MQ=255) cccGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGCTTACATTCTTAGTAAGGAACGTATAATAGGCCTATGTTTACATTTACTCaa < 1:1870557/89‑1 (MQ=255) gAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGCCTATGTTTACATTTACTCAAGAACGAATACAAGACGCCACCTATGCCTATCAGGGCGGCGGTCGTGGTCTGTCGGTCGAGCGTa > 1:1804111/1‑150 (MQ=255) | TGGCAACCTGCTTTGAGCGGATCAGCTAGGGCATATGTCGCGACCTCAGGGTGCTCCATGAGCATGGAAGCGACGGTGTCTTTACCGGATCGAGCTACTGCGGCGAGGCCGATGATGGTTGGCATTTTTGGCTCCAGGCCCCGAATTTCGGGGGTTAGAGGGATGTAGAACTCATGTTTACATTCTTAGTAAGGAACGTATAATAGGCCTATGTTTACATTTACTCAAGAACGAATACAAGACGCCACCTATGCCTATCAGGGCGGCGGTCGTGGTCTGTCGGTCGAGCGTA > NC_002947/2227320‑2227611 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |