| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,252,857 | T→A | 11.8% | intergenic (+70/‑49) | leuD → / → PP_1987 | 3‑isopropylmalate dehydratase small subunit/UbiE/COQ5 family methlytransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,252,857 | 0 | T | A | 11.8% | 282.0 / 24.5 | 101 | intergenic (+70/‑49) | leuD/PP_1987 | 3‑isopropylmalate dehydratase small subunit/UbiE/COQ5 family methlytransferase |
| Reads supporting (aligned to +/- strand): ref base T (45/44); new base A (7/5); total (52/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.61e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.92e-01 | |||||||||||
Only 100 of 102 total aligned reads displayed.
CTTGCAGGACAGCGACGCGATCAAGGCCTTCGAAGCCAAGCACCGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAGGCCAGCGCCTACCTCAGCAGCGCCGTGCACGCCCAAGGCAGTGAATTC > NC_002947/2252709‑2253004 | cTTGCAGGACAGCGACGCGATCAAGGCCTTCTAAGCCAAGCACCGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTa > 2:1464607/1‑150 (MQ=255) ttGCAGGACAGCGACGCGATCAAGGCCTTCGAAGCCAAGCACCGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTAc < 2:1686455/150‑1 (MQ=255) ttGCAGGACAGCGACGCGATCAAGGCCTTCGAAGCCAAGCACCGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTAc > 1:1555044/1‑150 (MQ=255) ttGCAGGACAGCGACGCGATCAAGGCCTTCGAAGCCAAGCACCGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCCGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTAc > 2:2352576/1‑150 (MQ=255) tGCAGGACAGCGACGCGATCAAGGCCTTCGAAGCACCACGCGGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTAcc < 1:1932392/150‑1 (MQ=255) gCAGGACAGCGACGCGATCAAGGCCTTCGAAGCCAAGCACCGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTAccc < 1:48900/150‑1 (MQ=255) aGGACAGCGACGCGATCAAGGCCTCAGAAAAAAAGCACCCTGCCAGCCAGCCTTGGCGGTTCCGTGATGCCTGAAGTTGGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCcgc > 2:2082158/1‑150 (MQ=255) gACAGCGACGATATCAAGGCCTTCGAAGCGAAGCTCCGCTCCAGCCAGCCTTGGCTGTTCCGTGATGCCTTATGTTCTTGGGTGACAGTGCGGGCCTCCTCTCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTAAACCcgcgc < 2:1007036/150‑2 (MQ=255) aGCGACGCGATCAAGGCCTTCGAAGCCAAGCACCGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAaga > 1:450480/1‑150 (MQ=255) aGCGACGCGATCAAGGCCTTCGAAGCCAAGCACCGCGCCAGCCAGATTATTCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAaga < 1:1467737/150‑1 (MQ=255) cgcgATCAAGGCCTTCGAAGCCAAGCACCGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCg < 2:888692/150‑1 (MQ=255) gATCAAGGCCTTCGAAGCCAAGCACCGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTTGATCTTGCTGAGATTGACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGca < 2:1791489/150‑1 (MQ=255) tCAAGGCCTTCGAAGCCAAGCACCGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCCGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGcaca < 1:2352576/150‑1 (MQ=255) aatgCCTTCGAAGCCAAGCACCGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAgg < 1:175099/147‑1 (MQ=255) ggCCTTCGAAGCCAAGCACCGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGca > 2:1325934/1‑150 (MQ=255) gCCTTCGAAGCCACGCACCGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCCTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGcaa < 2:1330747/150‑1 (MQ=255) gCCTTCGAAGCCAAGCACCGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGcaa < 1:895515/150‑1 (MQ=255) ccTTCGAAGCCAAGCACCGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGAACAGGcaac > 1:714685/1‑150 (MQ=255) ttCGAAGCCAAGCACCGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGcaacaa > 2:174963/1‑150 (MQ=255) ttCGAAGCCAAGCACCGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGcaacaa > 1:1830582/1‑150 (MQ=255) aaGCCAAGCACCGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAAt > 1:71111/1‑150 (MQ=255) ccAAGCACCGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCcgc < 2:1958300/120‑1 (MQ=255) ccAAGCACCGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCcgc > 1:1958300/1‑120 (MQ=255) ccAAGCACCGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTa < 1:1325934/150‑1 (MQ=255) aaaccACCGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTaa < 1:1934642/146‑1 (MQ=255) aaGCACCGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTaaa > 2:606959/1‑150 (MQ=255) aaGCACCGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTaaa < 1:1772419/150‑1 (MQ=255) aaGCACCGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTaaa > 2:1507229/1‑150 (MQ=255) aaGCACCGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTaaa > 2:1772419/1‑150 (MQ=255) aCCGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGaa > 2:1357521/1‑150 (MQ=255) ccGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAAc < 1:1357521/150‑1 (MQ=255) ccGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAAc < 2:1429178/150‑1 (MQ=255) gcgcCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACga > 1:852963/1‑150 (MQ=255) gccagccaGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACgaga < 1:2082158/150‑1 (MQ=255) gccagccTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATg < 1:174963/150‑1 (MQ=255) cagccTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGAc > 2:238246/1‑150 (MQ=255) gccTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGAcca < 1:1297634/150‑1 (MQ=255) gccTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGAcca < 2:1830582/150‑1 (MQ=255) gccTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGAcca > 1:1413489/1‑150 (MQ=255) ttGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGAccagca > 2:221884/1‑150 (MQ=255) gCTGTTCAGAGATGCCTAGATTACGTAGGTGAAAGTGCGGGCCGCCTCGCTCCTACAGAAAGATGCGGCCACTCAGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGAccagcaccc < 1:1354081/150‑1 (MQ=25) cTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACATGCAACAAAAATCTAAAGGAACGAGACATGAccagcaccca < 1:2298352/150‑1 (MQ=255) ttCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGAccagcacccagca > 1:838010/1‑150 (MQ=255) ccTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAAc < 2:114306/118‑1 (MQ=255) ccTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAAc > 1:114306/1‑118 (MQ=255) ccTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGAtgtg < 2:714685/150‑1 (MQ=255) ccTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGAtgtg > 1:1829728/1‑150 (MQ=255) ccTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGAtgtg > 1:2006788/1‑150 (MQ=255) cTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTgg < 1:606959/150‑1 (MQ=255) cTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTgg < 2:838010/150‑1 (MQ=255) cTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTgg < 1:221884/150‑1 (MQ=255) cTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCAAATCGATGTgg < 1:1507229/150‑1 (MQ=255) tGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGt > 2:2008197/1‑150 (MQ=255) tGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGt > 2:56213/1‑150 (MQ=255) tGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGt > 2:755285/1‑150 (MQ=255) gAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTc > 2:1357005/1‑150 (MQ=255) gAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTc < 2:1413489/150‑1 (MQ=255) ttCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAAc < 2:1555044/150‑1 (MQ=255) gTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGcc > 2:1319969/1‑150 (MQ=255) gTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGcc > 1:1281953/1‑150 (MQ=255) tAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCa < 2:1568276/150‑1 (MQ=255) ggTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGt > 2:2137708/1‑150 (MQ=255) gTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGCCCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGa < 1:428806/150‑1 (MQ=255) ggCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAgg < 1:238246/150‑1 (MQ=255) gCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAAc > 2:68417/1‑92 (MQ=255) gCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAAc < 1:68417/92‑1 (MQ=255) gCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAGGc > 1:1531458/1‑150 (MQ=255) gCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAGGc < 1:2008197/150‑1 (MQ=255) cctcGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGTGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAGGCCAgc < 1:1464607/150‑1 (MQ=255) ctcGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGc < 2:908808/137‑1 (MQ=255) tcGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAGGCCAgcgc < 1:1357005/150‑1 (MQ=255) cAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCACAGGTCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAGGCCAGCGCCTACCTcag > 1:1233216/1‑150 (MQ=39) aaaGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGAc > 1:2126925/1‑84 (MQ=255) aaaGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGAc < 2:2126925/84‑1 (MQ=255) aaaGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAGGCCAGCGCCTACCTcagcag > 2:1514973/1‑150 (MQ=255) aaaGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAGGCCAGCGCCTACCTc > 1:1861443/1‑145 (MQ=255) aaaGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAGGCCAGCGCCTACCTc < 2:1861443/145‑1 (MQ=255) gcgGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAGGCCAGCGCCTACCTCAGCAGCGCCGTGc < 2:852963/150‑1 (MQ=255) gTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAGGCCAGCGCCTACCTCAGCAGCGCCGTGCACg > 1:1663361/1‑150 (MQ=255) cTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAGGCCAGCGCCTACCTCAGCAGCGCCGTGCACGCCCa > 1:2266371/1‑150 (MQ=255) tGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAGGCCAGCGCCTACCTCAGCAGCGCCGTGCACGCCCaa < 1:942220/150‑1 (MQ=255) ctcttcgcgGGTAAACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGGTGTGGTCCAACGCCAGTTCGGCGAGCAGGCCAGCGCCTACCTCAGCAGCGCCGTGCACGCCCAAg > 2:1349849/6‑150 (MQ=255) ctcttcgcgGGTAAACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAGGCCAGCGCCTAc > 2:1596003/6‑125 (MQ=39) ctcttcgcgGGTAAACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAGGCCAGCGCCTAc < 1:1596003/120‑1 (MQ=255) tcttcgcgGGTAAACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAGGCCAGCGCCTACCTCAGCAGCGCCGTGCACGCCCAAgg > 1:1415159/5‑150 (MQ=255) tAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGGCCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAGGCCAGCGCCTACCTCAGCAGCGCCGTGCACGCCCAAgg < 2:2059542/150‑1 (MQ=255) cttcgcgGGTAAACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAg < 2:1117436/108‑1 (MQ=255) cttcgcgGGTAAACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAg > 1:1117436/4‑111 (MQ=255) ttcgcgGGTAAACCCGCGCAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAGGCCAGCGCCTACCTCAGCAGCGCCGTGCACGCCCAAGGCa > 2:877785/3‑150 (MQ=255) ttcgcgGGTAAACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGAccagcacccagc < 1:41102/73‑1 (MQ=25) ttcgcgGGTAAACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGAccagcacccagc > 2:41102/3‑75 (MQ=25) ttcgcgGGTAAACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAGGCCAGCGCCTa < 1:357944/119‑1 (MQ=255) ttcgcgGGTAAACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAGGCCAGCGCCTa > 2:357944/3‑121 (MQ=255) gcgcGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAGGCCAGCGCCTACCTCAGCAGCGCCGTGCACGCCCAAGGCAg < 2:2266371/150‑1 (MQ=255) gcgGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAGGCCAGCGCCTACCTCAGCAGCGCCGTGCACGCCCAAGGCAGTg > 1:703936/1‑150 (MQ=255) gcgGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAGGCCAGCGCCTACCTCAGCAGCGCCGTGCACGCCCAAGGCAGTg > 2:1336253/1‑150 (MQ=255) gcgGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAGGCCAGCGCCTACCTCAGCAGCGCCGTGCACGCCCAAGGCAGTg > 2:1713815/1‑150 (MQ=255) gcgGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGACACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAGGCCAGCGCCTACCTCAGCAGCGCCGTGCACGCCCAAGGCAGTg > 2:1533845/1‑150 (MQ=255) gggTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAGGCCAGCGCCTACCTCAGCAGCGCCGTGCACGCCCAAGGCAGTGaa > 2:782230/1‑150 (MQ=255) tttACCCGCAAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACCAGCTTCGACTTCCAGCCAGACCGCTGTTTTGCGCCAACTCCATTTCGGCGAGCCGGCCAGCGCCTACCTCAGCAGCGCCGTGCACGCCCAAGGCAGTGAATTc < 1:550982/150‑1 (MQ=255) | CTTGCAGGACAGCGACGCGATCAAGGCCTTCGAAGCCAAGCACCGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAGGCCAGCGCCTACCTCAGCAGCGCCGTGCACGCCCAAGGCAGTGAATTC > NC_002947/2252709‑2253004 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |