| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,305,982 | G→A | 8.8% | A206A (GCC→GCT) | PP_2028 ← | TPR repeat‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,305,982 | 0 | G | A | 8.8% | 376.9 / 19.3 | 133 | A206A (GCC→GCT) | PP_2028 | TPR repeat‑containing protein |
| Reads supporting (aligned to +/- strand): ref base G (50/71); new base A (7/5); total (57/76) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.60e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 139 total aligned reads displayed.
TCCAGGCGAGGCAAGAGGATGCCGCCCTGGTCGTCTTTAAGGTATTCGCCATTGGCCTGGCGCACCGGGGCGCCTTCGCGGCTGCCGATGCCCAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAGGAGCGCCAGGCCTTTTTGCACGGCCAGGTCGGCACGCTGGCCGGGTTTGGGCATGATCGACGGGTCGATGGCCTCGAGCAAATTGCG > NC_002947/2305833‑2306131 | aGGCGAGGCAAGAGGATGCCGCCCTGGTCGTCTTTAAGGTATTCGCCATTGGCCTGGCGCACCGGGGCGCCTTCGCGGCTGCCGATGCCCAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTcggcg > 2:1924275/1‑150 (MQ=255) aGGCGAGGCAAGAGGATGCCGCCCTGGTCGTCTTTAAGGTATTCGCCATTGGCCTGGCGCACCGGGGCGCCTTCGCGGCTGCCGATGCCCAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTcggcg > 2:732362/1‑150 (MQ=255) aagaagATGCCGCCCTGGTCGTCTTTAAGGTATTCGCCATTGGCCTGGCGCACCGGGGCGCCTTCGCGGCTGCCGATGCCCAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGgcgctgagc > 2:835860/1‑150 (MQ=255) aaGAGGATGCCGCCCTGGTCGTCTTTAAGGTATTCGCCATTGGCCTGGCGCACCGGGGCGCCTTCGCGGCTGCCGATGCCCAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGgcgctgagc > 2:437188/1‑150 (MQ=255) gagGATGCCGCCCTGGTCGTCTTTAAGGTATTCGCCATTGGCCTGGCGCACCGGGGCGCCTTCGCGGCTGCCGATGCCCAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCAGCGccgccgagcgc < 1:874525/150‑1 (MQ=255) gATGCCGCCCTGGTCGTCTTTAAGGTATTCGCCATTGGCCTGGCGCACCGGGGCGCCTTCGCGGCTGCCGATGCCCAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGgcgctgagcgccag < 1:945790/150‑4 (MQ=255) tGCCGCCCTGGTCGTCTTTAAGGTATTCGCCATTGGCCTGGCGCACCGGGGCGCCTTCGCGGCTGCCGATGCCCAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCgctgagcgctgagc < 1:143703/150‑1 (MQ=255) tGCCGCCCTGGTCGTCTTTAAGGTATGCGCCATTGGCCTGGCCCACCGGGGCGCCTTCGCGGCTGCCGATGCCCAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCgctgagcgctgagc > 1:574514/1‑150 (MQ=255) gccgccCTGGTCGTCTTTAAGGTATTCGCCATTGGCCTGGCGCACCGGGGCGCCTTCGCGGCTGCCGATGCCCAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGc‑c > 2:1549923/1‑150 (MQ=255) gccgccCTGGTCGTCTTTAAGGTATTCGCCATTGGCCTGGCGCACCGGGGCGCCTTCGCGGCTGCCGATGCCCAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGc‑c < 2:1630976/150‑1 (MQ=255) cgccCTGGTCGTCTTTAAGGTATTCGCCATTGGCCTGGCGCACCGGGGCGCCTTCGCGGCTGCCGATGCCCAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTa > 2:2283538/1‑150 (MQ=255) cgccCTGGTCGTCTTTAAGGTATTCGCCATTGGCCTGGCGCACCGGGGCGCCTTCGCGGCTGCCGATGCCCAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTa < 1:379311/150‑1 (MQ=255) gccCTGGTCGTCTTTAAGGTATTCGCCATTGGCCTGGCGCACCGGGGCGCCTTCGCGGCTGCCGATGCCCAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTAc < 1:1549923/150‑1 (MQ=255) gccCTGGTCGTCTTTAAGGTATTCGCCATTGGCCTGGCGCACCGGGGCGCCTTCGCGGCTGCCGATGCCCAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTAc < 2:2181590/150‑1 (MQ=255) cccTGGTCGGCGTTAAGGTATTCGCCATTGGCCTGGCGCACCGGGGCGCCTTCGCGGCTGCCGATGCCCAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTAcc > 1:2154719/1‑150 (MQ=255) ccTGGTCGTCTTTAAGGTATTCGCCATTGGCCTGGCGCACCGGGGCGCCTTCGCGGCTGCCGATGCCCAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGGGCTGAGCGCTGAGC‑CTACca > 1:1930495/1‑150 (MQ=255) gtcgtcTTTAAGGTATTCGCCATTGGCCTGGCGCACCGGGGCGCCTTCGCGGCTGCCGATGCCCAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACcagcag > 1:752150/1‑150 (MQ=255) tcgtcTTTAAGGTATTCGCCATTGGCCTGGCGCACCGGGGCGCCTTCGCGGCTGCCGATGCCCAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACcagcagc > 2:2065823/1‑150 (MQ=255) gtcTTTAAGGTATTCGCCATTGGCCTGGCGCACCGGGGCGCCTTCGCGGCTGCCGATGCCCAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACcagcagcag > 1:100037/1‑150 (MQ=255) tttAAGGTATTCGCCATTGGCCTGGCGCACCGGGGCGCCTTCGCGGCTGCCGATGCCCAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCAGCGccgccgagc < 2:337565/127‑1 (MQ=255) ggTATTCGCCATTGGCCTGGCGCACCGGGGCGCCTTCGCGGCTGCCGATGCCCAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCtt > 1:1039241/1‑150 (MQ=255) ggTATTCGCCATTGGCCTGGCGCACCGGGGCGCCTTCGCGGCTGCCGATGCCCAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCtt > 2:328618/1‑150 (MQ=255) gTATTCGCCATTGGCCTGGCGCACCGGGGCGCCTTCGCGGCTGCCGATGCCCAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTg > 1:1657919/1‑150 (MQ=255) ttCGCCATTGGCCTGGCGCACCGGGGCGCCTTCGCGGCTGCCGATGCCCAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCAGCGccgccgagcgccaggg > 1:1167067/1‑120 (MQ=255) gCCATTGGACTGGCGCACCGGGGCGCCTTCGCGGCTGCCGATGCCAACCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAg > 2:2143985/1‑150 (MQ=255) cccATTGGCCTGGCGCACCGGGGCGCCTTCGCGGCTGCCGATGCCCAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAg < 1:1208488/149‑1 (MQ=255) ccATTGGCCTGGCGCACCGGGGCGCCTTCGCGGCTGCCGATGCCCAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAgg < 1:328618/150‑1 (MQ=255) cATTGGCCTGGCGCACCGGGGCGCCTTCGCGGCTGCCGATGCCCAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGc < 1:474177/150‑1 (MQ=255) ttGGCCTGGCGCACCGGGGCGCCTTCGCGGCTGCCGATGCCCAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCg > 2:1058985/1‑150 (MQ=255) cTGGCGCACCGGGGCGCCTTCGCGGCTGCCGATGCCCAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGCTGCCCTGGCGCTCGCCTGCGCTGATGGCCGAGC‑GGACCAGCAGCAGGCGGCATTGACAGAGGctaccctc > 2:272856/1‑143 (MQ=255) cTGGCGCACCGGGGCGCCTTCGCGGCTGCCGATGCCCAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGgcgctgagc < 2:500563/106‑1 (MQ=255) gcgcACCGGGGCGCCTTCGCGGCTGCCGATGCCCAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACcagcagcag > 2:149190/1‑123 (MQ=255) gcgcACCGGGGCGCCTTCGCGGCTGCCGATGCCCAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACcagcagcag < 1:149190/123‑1 (MQ=255) gcACCGGGGCGCCTTCGCGGCTGCCGATGCCCAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCa < 2:1966291/150‑1 (MQ=255) cACCGGGGCGCCTTCGCGGCTGCCGATGCCCAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATTCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAg < 2:574514/150‑1 (MQ=255) cACCGGGGCGCCTTCGCGGCTGCCGATGCCCAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAg < 1:273713/150‑1 (MQ=255) cGGGGCGCCTTCGCGGCTGCCGATGCCCAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCGGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAGGAg > 1:1366292/1‑150 (MQ=255) ggggCGCCTTCGCGGCTGCCGATGCCCAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAGGAgc < 1:31582/150‑1 (MQ=255) gcgcCTTCGCGGCTGCCGATGCCCAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAGGAGCGcc < 2:1725435/150‑1 (MQ=255) ccTTCGCGGCTGCCGATGCCCAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAGGAGCGCCAgg > 2:1365614/1‑150 (MQ=255) ttCGCGGCTGCCGATGCCCAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAgg < 2:1145536/139‑1 (MQ=255) ttCGCGGCTGCCGATGCCCAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAgg > 1:1145536/1‑139 (MQ=255) ttCGCGGCTGCCGATGCCCAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAGGAGCGCCAGGcc > 1:1349354/1‑150 (MQ=255) ttCGCGGCTGCCGATGCCCAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAGGAGCGCCAGGcc < 2:1722189/150‑1 (MQ=255) cgGCTGCCGATGCCCAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGGGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAGGAGCGCCAGGCCtttt < 2:969539/150‑1 (MQ=255) cgGCTGCCGATGCCCAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAGGAGCGCCAGGCCtttt < 2:1930495/150‑1 (MQ=255) ggCTGCCGATGCCCAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGCCGGCCTTGGCCGAGGCCGCTCTGGGCCAGGAGCGCCAGGCCttttt < 1:422375/150‑1 (MQ=255) tGCCGATGCCCAGCATCAGCAGGCTTGGGCAATGGAGGCCGAGGGCCTGGGGGATGCCCTGGCGCTCGGCGGCGCTGA‑CGCTGGCCACCGCGATCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAGGAGCGCCAGGCCTTTTTGCa > 1:1151664/1‑150 (MQ=255) gATGCCCAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAGGAGCGCCAGGCCTTTTTGCACGGc > 1:999136/1‑150 (MQ=255) gATGCCCAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAGGAGCGCCAGGCCTTTTTGCACGGc < 2:1859123/150‑1 (MQ=255) gATGCCCAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAGGAGCGCCAGGCCTTTTTGCACGGc < 1:2283538/150‑1 (MQ=255) gctgggCATCGGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAGGAGCGCCAGGCCTTTTTGCACGGCCAg < 2:180075/145‑1 (MQ=255) ccAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAGGAGCGCCAGGCCTTTTTGCACGGCCAGGt > 2:2369104/1‑150 (MQ=255) cAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGgcgctgagcgctga < 1:1294527/75‑1 (MQ=255) cAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGgcgctgagcgctga > 2:1294527/1‑75 (MQ=255) cAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACcagcagcag < 1:293097/90‑1 (MQ=255) cAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGACA‑CAACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAGGAGCGCCAGGCCTTTTTGCACGGCCAGGTc > 1:1965851/1‑150 (MQ=255) cAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCACTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGNCCGCTCTGGGCCAGGAGCGCCAGGCCTTTTTGCACGGCCAGGNc < 1:531886/150‑1 (MQ=255) aGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAGGAGCGCCAGGCCTTTTTGCACGGCCAGGTCg < 1:1924275/150‑1 (MQ=255) gCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTcg < 1:195872/56‑1 (MQ=255) tCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACcagcagca < 2:139085/84‑1 (MQ=255) agcagGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAGGAGCGCCAGGCCTTTTTGCACGGCCAGGTCGGCACGc < 1:2369104/150‑1 (MQ=255) cagGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCAGGGTCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAGGAGCGCCAGGCCTTTTTGCACGGCCAGGTCGGCACGCTg > 1:1043976/1‑150 (MQ=255) gCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAGGAGCGCCAGGCCTTTTTGCACGGCCAGGTCGGCACGCTGGcc > 2:281152/1‑150 (MQ=255) ttGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAGGAGCGCCAGGCCTTTTTGCACGGCCAGGTCGGCACTCTGGCCgg > 2:295557/1‑150 (MQ=255) tGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAGGAGCGCCAGGCCTTTTTGCACGGCCAGGTCGGCACGCTGGCCggg < 1:703447/150‑1 (MQ=255) gggCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAGGAGCGCCAGGCCTTTTTGCACGGCCAGGTCGGCACGCTGGCCGGGt < 2:1151664/150‑1 (MQ=255) gggCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCCTGGCCGAGGCCGCTCTGGGCCAGGAGCGCCAGGCCTTTTTGCACGGCCAGGTCGGCACGCTGGCCGGGt < 1:2171430/150‑1 (MQ=255) ccTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAGGAGCGCCAGGCCTTTTTGCACGGCCAGGTCGGCACGCTGGCCGGGTTTgg < 1:281152/150‑1 (MQ=255) ccTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAGGAGCGCCAGGCCTTTTTGCACGGCCAGGTCGGCACGCTGGCCGGGTTTgg < 1:1394510/150‑1 (MQ=255) ccTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAGGAGCGCCAGGCCTTTTTGCACGGCCAGGTCGGCACGCTGGCCGGGTTTgg < 2:1860211/150‑1 (MQ=255) cggcCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAGGAGCGCCAGGCCTTTTTGCACGGCCAGGTCGGCACGCTGGCCGGGTTTGGGCATg < 1:2065823/150‑1 (MQ=255) cggcCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAGGAGCGCCAGGCCTTTTTGCACGGCCAGGTCGGCACGCTGGCCGGGTTTGGGCATg > 1:487756/1‑150 (MQ=255) ggcCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGGGCTGAGCGCTGAGC‑CTACCCGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAGGCGCGCCAGGCCTTTTTGCACGGCCAGGTCGGCACGCTGGCCGGGTTTGGGCATGa < 2:752150/150‑1 (MQ=255) ggcCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAGGAGCGCCAGGCCTTTTTGCAc < 2:1483919/115‑1 (MQ=255) ggcCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAGGAGCGCCAGGCCTTTTTGCAc > 1:1483919/1‑115 (MQ=255) ggcCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAGGAGCGCCAGGCCTTTTTGCACGGCCAGGTCGGCACGCTGGCCGGGTTTGGGCATGa < 2:100037/150‑1 (MQ=255) cGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAGGAGCGCCAGGCCTTTTTGCACGGCCAGGTCGGCACGCTGGCCGGGTTTGGGCATGATCg > 2:1018693/1‑150 (MQ=255) gAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAggcgg > 2:1304388/1‑64 (MQ=255) aGGGCCTGGGTGATGCCCTGGCGCTCGGGGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAGGAGCGCCAGGCCTTTTTGCACGGCCAGGTCGGCACGCTGGCCGGGTTTGGGCATGATCGAc < 2:103875/150‑1 (MQ=255) ccTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAGGAGCGCCAGGCCTTTTTGCACGGc > 2:303625/1‑109 (MQ=255) ccTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAGGAGCGCCAGGCCTTTTTGCACGGCCAGGTCGGCACGCTGGCCGGGTTTGGGCATGATCGACGGGt < 1:1803621/150‑1 (MQ=255) cTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAGGAGCGCCAGGCCTTTTTGCACGGCCAGGTc < 2:1576776/114‑1 (MQ=255) cTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAGGAGCGCCAGGCCTTTTTGCACGGCCAGGTc > 1:1576776/1‑114 (MQ=255) cTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAGGAGCGCCAGGCCTTTTTGCACGGCCAGGTCGGCACGCTGGCCGGGTTTGGGCATGATCGACGGGTc > 1:399950/1‑150 (MQ=255) cTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAGGAGCGCCAGGCCTTTTTGCACGGCCAGGTCGGCACGCTGGCCGGGTTTGGGCATGATCGACGGGTc > 1:1830204/1‑150 (MQ=255) tGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAGGAGCGCCAGGCCTTTTTGCACGGCCAGGTCGGCACGCTGGCCgg < 1:18807/127‑1 (MQ=255) tGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAGGAGCGCCAGGCCTTTTTGCACGGCCAGGTCGGCACGCTGGCCgg > 2:18807/1‑127 (MQ=255) gggTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGCGGCCGCTCTGGGCCAGGAGCGCCAGGCCTTTTTGCACGGCCAGGTCGGCACGCTGGCCGGGTTTGGGCATGATCGACGGGTCGa > 1:491369/1‑150 (MQ=255) ccTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAGGAGCGCCAGGCCTTTTTGCACGGCCAGGTCGGCACGCTGGCCGGGTTTGGGCATGATCGACGGGTCGATGGCCTCGa < 1:835860/150‑1 (MQ=255) ccTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAGGAGCGCCAGGCCTTTTTGCACGGCCAGGTCGGCACGCTGGCCGGGTTTGGGCATGATCGACGGGGCGATGGCCTCGa > 2:2282951/1‑150 (MQ=255) ggCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAgg < 2:1378929/56‑1 (MQ=255) ggCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAgg > 1:1378929/1‑56 (MQ=255) ggCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAGGAGCGCCAGGCCTTTTTGCACGGCCAGGTCGGCACGCTGGCCGGGTTTGGGCATGATCGACGGGTCGATGGCCTCGAGCa < 2:399950/150‑1 (MQ=255) gcgcTCAGCGCCGCCGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAGGAGCGCCAGGCCTTTTTGCACGGCCAGGTCGGCACGCTGGCCGGGTTTgg > 1:1830184/1‑119 (MQ=255) gcgcTCAGCGCCGCCGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAGGAGCGCCAGGCCTTTTTGCACGGCCAGGTCGGCACGCTGGCCGGGTTTgg < 2:1830184/119‑1 (MQ=255) gcgcTCAGCGCCGCCGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAGGAGCGCCAGGCCTTTTTGCACGGCCAGGTCGGCACGCTGGCCGGGTTTGGGCATGATCGACGGGTCGATGGCCTCGAGCaa > 2:1711358/1‑150 (MQ=255) gcgcTCAGCGCCGCCGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAGGAGCGCCAGGCCTTTTTGCACGGCCAGGTCGGCACGCTGGCCGGGTTTGGGCATGATCGACGGGTCGATAGCCTCGAgtga > 2:2315611/1‑147 (MQ=255) cTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAGGAGCGCCAGGCCTTTTTGCACGGCCAGGTCGGCACGCTGGCCGGGTTTGGGCATGATCGACGGGTCGATGGCCTCGAGCAAAtt < 1:801444/150‑1 (MQ=255) ggcggcGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAGGAGCGCCAGGCCTTTTTGCACGGCCAGGTCGGCACGCTGGCCGGGTTTGGGCATGATCGACGGGTCGATGGCCTCGAGCAAATTGCg > 2:255585/1‑150 (MQ=255) | TCCAGGCGAGGCAAGAGGATGCCGCCCTGGTCGTCTTTAAGGTATTCGCCATTGGCCTGGCGCACCGGGGCGCCTTCGCGGCTGCCGATGCCCAGCATCAGCAGGCTTGGGCCCTGGCGGCCGAGGGCCTGGGTGATGCCCTGGCGCTCGGCGGCGCTGAGCGCTGAGC‑CTACCAGCAGCAGGCGGCCTTGGCCGAGGCCGCTCTGGGCCAGGAGCGCCAGGCCTTTTTGCACGGCCAGGTCGGCACGCTGGCCGGGTTTGGGCATGATCGACGGGTCGATGGCCTCGAGCAAATTGCG > NC_002947/2305833‑2306131 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |