| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,313,084 | G→C | 5.4% | A349A (GCC→GCG) | benE‑I ← | benzoate transport protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,313,084 | 0 | G | C | 5.4% | 352.9 / 8.9 | 111 | A349A (GCC→GCG) | benE‑I | benzoate transport protein |
| Reads supporting (aligned to +/- strand): ref base G (57/48); new base C (4/2); total (61/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.88e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.16e-01 | |||||||||||
Only 100 of 112 total aligned reads displayed.
AGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTGATGTTGGCCGCCGCCGCCAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAGGTGCCCGGCAGGGCCATGAAGACACTCGCCAGCGTGACCCCGAACACCCCGACGAGGATGTAACAGACACCGGCGGCGATACCCG > NC_002947/2312944‑2313232 | aGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTGATGTTGGCCGCCGCCGCCAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGcc > 2:1375420/1‑150 (MQ=255) gCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTGATGTTGGCCGCCGCCGCCAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAg < 1:1916649/150‑1 (MQ=255) cGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCTCGCGAATACCCAACAGGCTGATGTTGGCCGGCGCCGCCAGGCAGGTGATCAGTGCTGCCTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTgg < 1:299651/150‑1 (MQ=255) ttCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTGATGTTGGCCGCCGCCGCCAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCTCTGGCCAGGCTGgcg > 2:1682616/1‑150 (MQ=255) ttCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTGATGTTGGCCGCCGCCGCCAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGgcg > 2:230791/1‑150 (MQ=255) aaGGACAACGCGGGCCAGCAGACCAATCACCAGGCGCCAGAAAGCCCCGCCAATACCCACCAGGCTGATGTTGGCCGCCCCCGCGAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGcc < 2:68678/149‑1 (MQ=255) gACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTGATGTTGGCCGCCGCCGCCAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGAt < 1:1960960/150‑1 (MQ=255) gTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTGATGTTGGCCGCCGCCGCCAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGcc > 1:784142/1‑150 (MQ=255) gggCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTGATGTTGGCCGCCGCCGCCAGGAAGGTGATCAGTGCTGACTCGCGTGAACGTGCATCGGCCAGGGCGCTGGCTAGGCTGGCTCCTATGGTGCCca < 2:1698386/150‑1 (MQ=255) ggCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTGATGTTGGCCGCCGCCGCCAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCca < 1:789485/149‑1 (MQ=255) ggCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTGATGTTGGCCGCCGCCGCCAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCca > 2:789485/1‑149 (MQ=255) gCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTGATGTTGGCCGCCGCCGCCAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCcagc > 1:1138585/1‑150 (MQ=255) gCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTGATGTTGGCCGCCGCCGCCAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCcagc > 1:853631/1‑150 (MQ=255) ccAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTGATGTTGGCCGCCGCCGCCAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAgg > 2:113294/1‑128 (MQ=255) ccAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTGATGTTGGCCGCCGCCGCCAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAgg < 1:113294/128‑1 (MQ=255) ccAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTGATGTTGGCCGCCGCCGCCAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCcagca > 1:700423/1‑150 (MQ=255) agcagACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTGATGTTGGCCGCCGCCGCCAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAgg > 1:1896593/1‑150 (MQ=255) agcagACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTGATGTTGGCCGCCGCCGCCAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAgg > 1:1896631/1‑150 (MQ=255) cAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTGATGTTGGCCGCCGCCGCCAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCCGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGc > 1:1121318/1‑150 (MQ=255) cAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTGATGTTGGCCGCCGCCGCCAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAg > 2:509013/1‑118 (MQ=255) cAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTGATGTTGGCCGCCGCCGCCAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAg < 1:509013/118‑1 (MQ=255) cAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTGATGTTGGCCGCCGCCGCCAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCTGCTGGGCaccat < 2:43970/150‑5 (MQ=255) cAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTGATGTTGGCCGCCGCCGCCAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGc > 2:973502/1‑150 (MQ=255) cccAGAAAGCCCCGCCAATACCCAACAGGCTGATGTTGGCCGCCGCCGCCAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGggtgg > 2:610106/1‑150 (MQ=255) cccAGAAAGCCCCGCCAATACCCAACACGCTGATGTTGGCCGCCGCCGCCAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGggtgg < 1:556637/150‑1 (MQ=255) ccAGAAAGCCCCGCCAATACCCAACCGGCTGATGTTGGCCGCCGCCGCCAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑ACGCCAGggtggt < 2:2029055/150‑1 (MQ=255) aGAAAGCCCCGCCAATACCCAACAGGCTGATGTTGGCCGCCGCCGCCAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGa < 1:1276592/150‑1 (MQ=255) gAAAGCCCCGCCAATACCCAACAGGCTGATGTTGGCCGCCGCCGCCAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTg < 2:155879/97‑1 (MQ=255) gAAAGCCCCGCCAATACCCAACAGGCTGATGTTGGCCGCCGCCGCCAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTg > 1:155879/1‑97 (MQ=255) gCCCCGCCAATACCCAACAGGCTGATGTTGGCCGCCGCCGCCAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAg < 2:1896593/150‑1 (MQ=255) gCCCCGCCAATACCCAACAGGCTGATGTTGGCCGCCGCCGCCAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAg < 2:1896631/150‑1 (MQ=255) gCCCCGCCAATACCCAACAGGCTGATGTTGGCCGCCGCCGCCAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAg < 2:700423/150‑1 (MQ=255) cccccGCCAATACCCAACAGGCTGATGTTGGCCGCCGCCGCCAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAg < 1:1557256/149‑1 (MQ=255) cccGCCAATACCCAACAGGCTGATGTTNGCCGCCGCCGCCNGGAAGGNGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAGGt > 1:1712652/1‑150 (MQ=255) ccGCCAATACCCAACAGGCTGATGTTGGCCGCCGCCGCCAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAGGTg > 2:2250636/1‑150 (MQ=255) cGCCAATACCCAACAGGCTGATGTTGGCCGCCGCCGCCAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTTATAAAg > 2:829641/1‑146 (MQ=255) cGCCAATACCCAACAGGCTGATGTTGGCCGCCGCCGCCAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAGGTGc < 1:690843/150‑1 (MQ=255) cGCCAATACCCAACAGGCTGATGCTGGCCGCCGCCGCCAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTTATAAAg < 1:829641/146‑1 (MQ=255) gCCAATACCCAACAGGCTGATGTTGGCCACCGCCGCCAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAGGTGcc > 1:1009025/1‑150 (MQ=255) ccAATACCCAACAGGCTGATGTTGGCCGCCGCCGCCAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGCGGCGATAAAGGTGccc > 2:1809865/1‑150 (MQ=255) cAATACCCAACAGGCTGATGTTGGCCGCCGCCGCCAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAGGTGCCCg > 1:1038587/1‑150 (MQ=255) cAATACCCAACAGGCTGATGTTGGCCGCCGCCGCCAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCAAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAGGTGCCCg > 1:722179/1‑150 (MQ=255) tagccAACAGGCTGATGTTGGCCGCCGCCGCCAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAGGTGCCCGGCa > 1:2402619/4‑150 (MQ=255) cAGGCTGATGTTGGCCGCCGCCGCCAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGggtggt < 1:1757121/126‑1 (MQ=255) cAGGCTGATGTTGGCCGCCGCCGCCAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGggtggt > 2:1757121/1‑126 (MQ=255) cggCTTATGTTGGCCGCCGCCGCCAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAGGTGCCCGGCAGGGCCATg > 2:425148/2‑150 (MQ=255) gCTGATGTTGGCCGCCGCCGCCAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAGGTGCCCGGCAGGGCCATGaa < 1:1686388/150‑1 (MQ=255) gATGTTGGCCGCCGCCGCCAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAGGTGCCCGGCAGGGCCATGAAGac > 2:482042/1‑150 (MQ=255) gTTGGCCGCCGCCGCCAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAgg < 1:991229/97‑1 (MQ=255) tGGCCGCCGCCGCCAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTgg > 2:2029362/1‑75 (MQ=255) tGGCCGCCGCCGCCAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTgg < 1:2029362/75‑1 (MQ=255) ccgccgccgccAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAGGTGCCCGGCAGGGCCATGAAGACCCTCGCCa < 2:1054767/150‑1 (MQ=255) gccgccgccAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAGGTGCCCGGCAGGGCCATGAAGACACTCGCCAGc < 2:743118/150‑1 (MQ=255) ccgccgccAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAGGTGc > 2:2279119/1‑120 (MQ=255) ccgccgccAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAGGTGc < 1:2279119/120‑1 (MQ=255) cgccAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAGGTGCCCGGCAGGGCCATGAAGACACTCGCCAGCGTGAc > 1:649894/1‑150 (MQ=255) gccAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGa < 1:10535/106‑1 (MQ=255) gccAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGa > 2:10535/1‑106 (MQ=255) gaGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAGGTGCCCGGCAGGGCCATGAAGaca > 2:1648273/2‑133 (MQ=255) cAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAGGTGCCCGGCAGGGCCATGAAGaca < 1:1648273/133‑1 (MQ=255) aGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAGGTGCCCGGCAGGGCCATGAAGACACTCGCCAGCGTGACCCCg < 2:2223163/150‑1 (MQ=255) gAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAGGTGCCCGGCAGGGCCATGaa > 2:971614/1‑126 (MQ=255) gAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAGGTGCCCGGCAGGGCCATGaa < 1:971614/126‑1 (MQ=255) gAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAGGTGCCCGGCAGGGCCATGAAGACACTCGCCAGCGTGACCCCGaa < 2:2186925/150‑1 (MQ=255) gTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAGGTGCCCGGCAGGGCCAt < 2:1292556/119‑1 (MQ=255) gTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAGGTGCCCGGCAGGGCCAt > 1:1292556/1‑119 (MQ=255) gTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAGGTGCCCGGCAGGGCCATGAAGACACTCGCCAGCGTGACCCCGaccacc < 2:1009025/150‑1 (MQ=255) tGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAGGTGCCCGGCAGGGCCATGAAGACACTCGCCAGCGTGACCCCGAACAccc < 1:973502/150‑1 (MQ=255) tGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAGGTGCCCGGCAGGGCCATGAAGACACTCGCCAGCGTGACCCCGAACAccc < 1:2252830/150‑1 (MQ=255) tGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAGGTGCCCGGCAGGGCCATGAAGACACTCGCCAGCGTGACCCCGAACAccc < 2:1698952/150‑1 (MQ=255) gATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAGGTGc < 2:491825/104‑1 (MQ=255) gATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAGGTGc > 1:491825/1‑104 (MQ=255) tGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCCGGGCAAGGC‑CCGCCAGGGCGGTGATAAAGGCGCCCGGCAGGGCCATGAAGACACTCGCCAGCGTGACCCCGAACACCCCGACGAg > 1:2400151/1‑150 (MQ=255) tGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAGGTGCCCGGCAGGGCCATGAAGACACTCGCCAGCGTGACCCCGAACACCCCGACGCGGAt < 2:2402619/150‑1 (MQ=255) gACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAGGTGCCCGGCAGGGCCATGAAGACACTCGCCAGCGTGACCCCGAACACCCCGACGAGGATg > 1:1514178/1‑150 (MQ=255) tCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGT‑CCGCCAGGGTGGTGATAAAGGTGCCCGGCAGGGCCATGAAGACACTCGCCAGCGTGACCCCGAACACCCCGACGAGGATGTaa > 2:416296/1‑150 (MQ=255) tCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAGGTGCCCGGCAGGGCCATGAAGACACTCGCCAGCGTGACCCCGAACACCCCGACGAGGATGTaa < 1:610106/150‑1 (MQ=255) tCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAGGTGCCCGGCAGGGCCATGAAGACACTCGCCAGCGTGACCCCGAACACCCCGACGAGGATGTaa > 1:1425901/1‑150 (MQ=255) tCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAGGTGCCCGGCAGGGCCATGAAGACACTCGCCAGCGTGACCCCGAACACCCCGACGAGGATGTaa > 2:584713/1‑150 (MQ=255) tCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAGGTGCCCGGCAGGGCCATGAAGACACTCGCCAGCGTGACCCCGAACACCCCGACGAGGATGTaa < 1:584713/150‑1 (MQ=255) tCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAGGTGCCCGGCAGGGCCATGAAGACACTCGCCAGCGTGACCCCGAACACCCCGACGAGGATGTaa < 1:230791/150‑1 (MQ=255) gcgTGAACGGGCATCGGCGCGGGCGCGCTCTAAGGGGGCTCCGCTGGTGCCCAGCCGAGCTGCACGCCTCAATTGT‑GTGATAAAGGTGCCCGGCAGGGCCATGAAGACACTCGCCAGCGTGACCCCGAACACCCCGACGAGGATGTAACa < 1:1854112/150‑1 (MQ=255) gcgTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGAGCCGCGGAGGGCCAGGC‑CCGCCATGGTGGTGATACAGGTGCCCGGCAGGGCCATGAAGACACTCGCCAGCGTGACGCCGAACACACCGAAGAGGGTGTACCa > 1:302554/1‑150 (MQ=255) tGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAGGTGCCCGGCAGGGCCATGAAGACACTCGCCAGCGTGACCCCGAACACCCCGACGAGGATGTAACAGac > 1:817781/1‑150 (MQ=255) tGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAGGTGCCCGGCAGGGCCATGAAGACACTCGCCAGCGTGACCCCGAACACCCCGACGAGGATGTAACAGac > 2:574651/1‑150 (MQ=255) cttgggctCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAGGTGCCCGGCAGGGCCATGAAGACACTCGCCAGCGTGACCCCGAACACCCCGACGAGGATGTAACAGACAcc > 2:2399956/8‑150 (MQ=255) gggCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAGGTGCCCGGCAGGGCCATGAAGACACTCGCCAGCGTGACCCCGAACACCCCGACGAGGATGTAACAGACACcgg > 1:862240/1‑150 (MQ=255) gggCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAGGTGCCCGGCAGGGCCATGAAGACACTCGCCAGCGTGACCCCGAACACCCCGACGAGGATGTAACAGACACcgg > 2:1918666/1‑150 (MQ=255) gcctggCCAGCGCCCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAGGTGCCCGGCAGGGCCATGAAGACACTCGCCAGCGTGACCCCGAACACCCCGACGAGGATGTAACAGACACcggcgg > 1:2398619/5‑150 (MQ=255) cctggCCAGCGCCCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAGGTGCCCGGCAGGGCCATGAAGACACTCGCCAGCGTGACCCCGAACACCCCGACGAGGATGTAACAGACACCggcggc < 2:2398619/147‑1 (MQ=255) aTCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGT‑CCGCCAGGGTGGTGATAAAGGTGCCCGGCAGGGCCATGAAGACACTCGCCAGCGTGACCCCGAACACCCCGACGAGGATGTAACAGACACCggcggc < 1:416296/150‑1 (MQ=255) aTCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAGGTGCGCTGCAGGGCCATGAAGACACTCGCCAGCGTGACCCCGAACAGCCCGACGAGGATGTAACAGACACCggcggc > 1:160653/1‑150 (MQ=255) aTCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAGGTGCCCGGCAGGGCCATGAAGACACTCGCCAGCGTGACCCCGAACACCCCGACGAGGATGTAACAGACACCggcggc < 2:2154575/150‑1 (MQ=255) ctggCCAGCGCCCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAGGTGCCCGGCAGGGCCATGAAGACACTCGCCAGCGTGACCCCGAACACCCCGACGAGGATGTAACAGACACCGgcggcg > 1:1495035/3‑150 (MQ=255) ctggCCAGCGCCCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGAGCAAGGC‑CCGCCAGGGAGTTGATAAACGTGCCCGGCAGGGCCATGAAGACACTCGCCAGCGTGACCCAGAACACCCCGACGAGGATGTAACAGACACCggcggca > 1:1292282/3‑149 (MQ=255) ggCCAGCGCCCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAGGTGCCCGGCAGGGCCATGAAGac < 2:798403/93‑1 (MQ=255) ggCCAGCGCCCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAGGTGCCCGGCAGGGCCATGAAGac > 1:798403/1‑93 (MQ=255) ccAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAGGTGCCCGGCAGGGCCATGAAGACACTCGCCAGCGTGACCCCGAACACCCCGACGATGATGTAACAGACACCGGCGGCGATAc < 2:1138585/150‑1 (MQ=255) ccAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAGGTGCCCGGCAGGGCCATGAAGACACTCGCCAGCGTGACCCCGAACACCCCGACGAGGATGTAACAGACACCGGCGGCGATAc > 2:7259/1‑150 (MQ=255) gggCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAGGTGCCCGGCAGGGCCATGAAGACACTCGCCAGCGTGACCCCGAACACCCCGACGAGGATGTAACAGACACCGGCGGCGATACCCg > 2:805097/1‑150 (MQ=255) | AGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTGATGTTGGCCGCCGCCGCCAGGAAGGTGATCAGTGCTGACTCGCGTGAACGGGCATCGGCCAGGGCGCTGGCCAGGCTGGCGCCGATGGTGCCCAGCAGGGCAAGGC‑CCGCCAGGGTGGTGATAAAGGTGCCCGGCAGGGCCATGAAGACACTCGCCAGCGTGACCCCGAACACCCCGACGAGGATGTAACAGACACCGGCGGCGATACCCG > NC_002947/2312944‑2313232 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |