New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1037774 =	21 (1.220)	4 (0.280)	3/232	1.7	20.8%	intergenic (+16/+100)	PP_0896/PP_0897	carbon‑nitrogen hydrolase family protein/class 1 fumarate hydratase
	?	NC_002947	1037852 =	13 (0.910)					intergenic (+94/+22)	PP_0896/PP_0897	carbon‑nitrogen hydrolase family protein/class 1 fumarate hydratase

GGTACACATCACTGGCCCTGCCCTGTGGCAGAGCAAGATTGCCGAAAGCCTGGCCGTCGAAGTGAAGTAACCTGATGTAACTGCGGCGGCTGCTTCGCGGGCAAGCCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGAGCGGGCTTGCCCGCGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1037943‑1037774 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgggagcgggcttgcccgcgaagCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTACCGATTCACCGTTGCTGTCCACGGCGACGGTCACCGGCATGTCCTTGACTTCGAACT  >  NC_002947/1037852‑1037998                                                                                                                                                                                                                                                                                                                               GGTACACATCACTGGCCCTGCCCTGTGGCAGAGCAAGATTGCCGAAAGCCTGGCCGTCGAAGTGAAGTAACCTGATGTAACTGCGGCGGCTGCTTCGCGGGCAAGCCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTGG                                                                                                                                                                         <  1:27789/150‑1            CTGGCCCTGCCCTGTGGCAGAGCAAGATTGCCGAAAGCCTGGCCGTCGAAGTGAAGTAACCTGATGTAACTGCGGCGGCTGCTTCGCGGGCAAGCCCGCTCCCACACGCACAGCGCAACCCAGAAGGCTACGCATTTGGGAGCGGGCTcg                                                                                                                                                              >  2:172357/1‑148                                                     GCCGTCGAAGTGAAGTAACCTGATGTAACTGCGGCGGCTGCTTCGCGGGCAAGCCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTG                                                                                                                                                                          >  1:395136/1‑97                                                     GCCGTCGAAGTGAAGTAACCTGATGTAACTGCGGCGGCTGCTTCGCGGGCAAGCCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTG                                                                                                                                                                          <  2:395136/97‑1                                                                                                       AAGCCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGT                                                                   >  1:148282/1‑150                                                                                                       AAGCCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGAC                                                                                                                <  1:387428/105‑1                                                                                                       AAGCCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGAC                                                                                                                >  2:387428/1‑105                                                                                                            CGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGT                                                              >  2:146948/1‑150                                                                                                                                                               TTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTACCGATTCACCGTTGCTGTCCACGGCGACGGTCACCGGCATGTCCTTGA           <  2:148282/150‑1                                                                                                                                                                  CCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTACCGATTCACCGTTGCTGTCCACGGCGACGGTCACCGGCATGTCCTTGACTT        <  2:27789/150‑1                                                                                                                                                                   CCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTACCGATTCACCGTTGCTGTCCACGGCGACGGTCACCGGCATGTCCTTGACTTC       >  1:68167/1‑150                                                                                                                                                                        AAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTACCGATTCACCGTTGCTGTCCACGGCGACGGTCACCGGCATGTCCTTGACTTCGAACT  >  2:374726/1‑150                                                                                                                                                                                                                                                                                                                               GGTACACATCACTGGCCCTGCCCTGTGGCAGAGCAAGATTGCCGAAAGCCTGGCCGTCGAAGTGAAGTAACCTGATGTAACTGCGGCGGCTGCTTCGCGGGCAAGCCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGAGCGGGCTTGCCCGCGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1037943‑1037774 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgggagcgggcttgcccgcgaagCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTACCGATTCACCGTTGCTGTCCACGGCGACGGTCACCGGCATGTCCTTGACTTCGAACT  >  NC_002947/1037852‑1037998

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.