New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 6027949 = | 23 (1.340) | 7 (0.480) | 6/236 | 1.0 | 30.1% | intergenic (‑37/+74) | PP_5277/kauB | MFS transporter/4‑guanidinobutyraldehyde dehydrogenase |
? | NC_002947 | 6028006 = | 13 (0.890) | intergenic (‑94/+17) | PP_5277/kauB | MFS transporter/4‑guanidinobutyraldehyde dehydrogenase |
TGCCGTAGCCCCAGGCCTCCAGGCGCAGGGACACCAGCGGCATGCTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGCCAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTTCTCCAGTGCGTGCAGCGACTTGTCACGG > NC_002947/6027801‑6028089 | tGCCGTAGCCCCAGGCCTCCAGGCGCAGGGACACCAGCGGCATGCTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGCCAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGc < 1:231654/150‑1 (MQ=255) ccGTAGCCCCAGGCCTCCAGGCGCAGGGACACCAGCGGCATGCTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGCCAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCgg < 2:273084/150‑1 (MQ=255) ccagtacgatggtggcgacatgaccgcgcggttcggtggcttcaaacagtcgggcaacggcagtgacaagtcgctgcacgcactggagaagtacaccgagctgaaggcgacctggatcaagctgtaacccggtaggtccttttcGcggga < 1:293974‑M1/6‑2 (MQ=255) ccccAGGCCTCCAGGCGCAGGGACACCAGCGGCATGCTCACGCCAAGCGCGAGAACGACACTGAGCACCGATGCCAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGc > 2:102572/1‑150 (MQ=255) ccAGGCCTCCAGGCGCAGGGACACCAGCGGCATGCTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGCCAGTACGGCGAAGTAGGTAACCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGccc > 2:403744/1‑150 (MQ=255) tggtggcgacatgaccgcgccgttcggtggcttcaaacagtcgggcaacggccgtgacaagtcgctgcacgcactggagaagtacaccgagctgaaggcgacctggatcaagctgtaacccggtaggtccttttcGCGGGCAAGCCCGCt < 1:61900‑M1/15‑1 (MQ=255) ggtggcgacatgaccgcgccgttcggtggcttcaaacagtcgggcaacggccgtgacaagtcgctgcacgcactggagaagtacaccgagctgaaggcgacctggatcaagctgtaacccggtaggtccttttcGCGGGCAAGCCCGCTc > 1:263013‑M1/135‑150 (MQ=255) tCCAGGCGCAGGGACACCAGCGGCATGCTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGCCAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTg > 2:318495/1‑150 (MQ=255) gcAGGGACACCAGCGGCATGCTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGCCAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGt > 1:55188/1‑150 (MQ=255) cGGCATGCTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGCCAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGc < 2:179767/150‑1 (MQ=255) ggCATGCTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGCCAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCa < 2:198996/150‑1 (MQ=255) cttcaaacagtcgggcaacggccgtgacaagtcgctgcacgcactggagaagtacaccgagctgaaggcgacctggatcaagctgtaacccggtaggtccttttcGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGaga > 1:120296‑M1/106‑149 (MQ=255) cTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGCCAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCg > 1:81672/1‑150 (MQ=255) tCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGCCAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGTCTCGAAGACCTGCAGGAGCgg < 1:318495/150‑1 (MQ=255) aaacagtcgggcaacggccgtgacaagtcgctgcacgcactggagaagtacaccgagctgaaggcgacctggatcaagctgtaacccggtaggtccttttcGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCgg > 1:18697‑M1/102‑148 (MQ=255) aaacagtcgggcaacggccgtgacaagtcgctgcacgcactggagaagtacaccgagctgaaggcgacctggatcaagctgtaacccggtaggtccttttcGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCgg < 2:18697‑M1/47‑1 (MQ=255) ccAGCCCGACACTGAGCACCGATGCCAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCGGGCTTGc > 2:161973/1‑144 (MQ=255) ccAGCCCGACACTGAGCACCGATGCCAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCGGGCTTGc < 1:161973/144‑1 (MQ=255) aGCACCGATGCCAGTACGGCAAAGTAGGTACCCCAACGCATTAACGGGTCTCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCgg < 1:252154/150‑1 (MQ=255) gATGCCAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCGGGCTTGCCTGCGAAAAGGACCTACCGGGTTACa < 1:403744/150‑1 (MQ=255) gTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGAt > 1:241437/1‑150 (MQ=255) ggCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGaagatc > 1:97064/1‑145 (MQ=255) caccgagctgaaggcgacctggatcaagctgtaacccggtaggtccttttcGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGa > 2:247388‑M1/52‑94 (MQ=255) caccgagctgaaggcgacctggatcaagctgtaacccggtaggtccttttcGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGa < 1:247388‑M1/43‑1 (MQ=255) cAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCgg > 1:252765/1‑150 (MQ=255) aCGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGgtg < 1:102572/150‑1 (MQ=255) aTTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGc > 1:336846/1‑133 (MQ=255) aTTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGc < 2:336846/133‑1 (MQ=255) ccTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTTCTCCAg > 1:187279/1‑150 (MQ=255) cTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTTCTCCAgt < 2:252765/150‑1 (MQ=255) aagctgtaacccggtaggtccttttcGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCGGGCTTGCCCGCGaa > 1:226989‑M1/27‑86 (MQ=255) aagctgtaacccggtaggtccttttcGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCGGGCTTGCCCGCGaa < 2:226989‑M1/60‑1 (MQ=255) ggCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTTCTCCAGTGCGTGCAGCGACTTGTCACgg < 2:241437/150‑1 (MQ=255) | TGCCGTAGCCCCAGGCCTCCAGGCGCAGGGACACCAGCGGCATGCTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGCCAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTTCTCCAGTGCGTGCAGCGACTTGTCACGG > NC_002947/6027801‑6028089 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |