New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5201663	8 (0.470)	6 (0.480)	6/204	0.8	52.5%	intergenic (‑101/‑79)	PP_4582/PP_4583	membrane protein/putative Peptidase
	?	NC_002947	= 5201684	5 (0.400)					intergenic (‑122/‑58)	PP_4582/PP_4583	membrane protein/putative Peptidase

AGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGC  >  NC_002947/5201535‑5201816                                                                                                                                                      |                                                                                                                                     aGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGtt                                                                                                                                      <  2:123940/150‑1 (MQ=255)       aGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCACTGTTggagcg                                                                                                                                >  1:263396‑M2/1‑144 (MQ=255)        ggTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTggagcgg                                                                                                                               >  2:238958‑M2/1‑143 (MQ=255)              gTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTggagcgggtttac                                                                                                                         >  2:383629‑M2/1‑137 (MQ=255)                              gtgtTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTggagcggg                                                                                                                              <  1:192550‑M2/129‑9 (MQ=255)                              gtgtTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTggagcggg                                                                                                                              >  2:192550‑M2/1‑121 (MQ=255)                                                                                    aGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTggagcgggtttacccgcgaagaggccggcacag                                                                                                     <  2:387494‑M2/100‑34 (MQ=255)                                                                                    aGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTggagcgggtttacccgcgaagaggccggcacag                                                                                                     >  1:387494‑M2/1‑67 (MQ=255)                                                                                                         gCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGCTCCCTGTTGGAGCGGGCTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATCGCCCAAGCCCACCAGGCCAc                              >  2:244036/1‑150 (MQ=255)                                                                                                              ttCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCACGATTGCACAACCCTACCAGGCCACCGAcc                         >  2:31076/1‑150 (MQ=255)                                                                                                                   gggTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTggagcgggtttacccgcgaagaggccggcacaggcaaacactgtctgcgcccggaaaagtgtttatcataggcatctc                                                        <  2:31573‑M2/114‑79 (MQ=255)                                                                                                                   gggTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTggagcgggtttacccgcgaagaggccggcacaggcaaacactgtctgcgcccggaaaagtgtttatcataggcatctc                                                        >  1:31573‑M2/1‑36 (MQ=255)                                                                                                                          cccGCTCCTACCTCGGTGCGATCCCTGTTggagcgggtttacccgcgaagaggccggcacaggcaaacactgtctgcgcccggaaaagtgt                                                                        >  1:362193‑M2/1‑29 (MQ=255)                                                                                                                          cccGCTCCTACCTCGGTGCGATCCCTGTTggagcgggtttacccgcgaagaggccggcacaggcaaacactgtctgcgcccggaaaagtgt                                                                        <  2:362193‑M2/91‑63 (MQ=255)                                                                                                                          cccGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGCCCAGGCCACCGACCCGTATGCCTGGc             >  2:119665/1‑150 (MQ=255)                                                                                                                          cccGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGc             >  1:321136/1‑150 (MQ=255)                                                                                                                           ccGCTCCTACCTCGGTGCGATCCCTGTTggagcgggtttacccgcgaagaggccggcacaggcaaacactgtctgcgccc                                                                                  >  2:177602‑M2/1‑28 (MQ=255)                                                                                                                           ccGCTCCTACCTCGGTGCGATCCCTGTTggagcgggtttacccgcgaagaggccggcacaggcaaacactgtctgcgccc                                                                                  <  1:177602‑M2/80‑53 (MQ=255)                                                                                                                                     cTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAgcgc  >  2:171457/1‑150 (MQ=255)                                                                                                                                                      |                                                                                                                                     AGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGC  >  NC_002947/5201535‑5201816

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.