New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1114899	14 (0.820)	5 (0.360)	5/228	1.1	28.2%	intergenic (‑88/+91)	rlmF/valS	ribosomal RNA large subunit methyltransferase F/valine‑‑tRNA ligase
	?	NC_002947	= 1114925	14 (1.000)					intergenic (‑114/+65)	rlmF/valS	ribosomal RNA large subunit methyltransferase F/valine‑‑tRNA ligase

TGGGTTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACCCTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTCGGTGAAGTTGGCCAGGGCCTGTTCGGACTCGGCCAGCTTGGCG  >  NC_002947/1114793‑1115062                                                                                                                                     |                                                                                                                                          tgggtTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACCCTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGGCTTGAAGGTTGGCGCCGtcctgtgggagcggcct                                                                                                                          <  1:185596‑M2/150‑18 (MQ=255)                         tgtCCAGCCCTATACGAGCGGTGGCTTGAAGACCCTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGc                                                                                                  <  1:304207/150‑1 (MQ=255)                                                gCTTGAAGACCCTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGa                                                                           >  1:135836/1‑150 (MQ=255)                                                     aaGACCCTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACa                                                                      <  2:185596/150‑1 (MQ=255)                                                          ccTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGt                                                                             <  1:196197/138‑1 (MQ=255)                                                          ccTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGt                                                                             >  2:196197/1‑138 (MQ=255)                                                                  tgctgcGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGtcctgtgggagcggccttgtgtcgcgaaagggccgtacagcggccccagggtcttcaagccaccgctcgtatagggctggac                                                         <  1:61986‑M2/150‑83 (MQ=255)                                                                        gcAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCAtg                                                   >  1:31492/1‑150 (MQ=255)                                                                             ccTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGtcctgtgggagcggccttgtgtcgcgaaagggccgtacagcggccccagggtcttcaagccaccgctcgtatagggctggacactgccatgac                                              >  2:61986‑M2/1‑57 (MQ=255)                                                                                    cGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTCGGTGaa                                       <  1:276284/150‑1 (MQ=255)                                                                                    cGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTCGGTGaa                                       <  1:396706/150‑1 (MQ=255)                                                                                      acacAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTCGGTGAAGt                                     >  1:199523/1‑150 (MQ=255)                                                                                               cGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTCGGTGAAGTTGGCCAggg                            >  1:223258/1‑150 (MQ=255)                                                                                                    ccACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTCGGTGAAGTTGGCCAGGGCCTGt                       >  1:122065/1‑150 (MQ=255)                                                                                                     cacaGGAGGGTGGCGCCTTGAAGGTTGGCGCCGtcctgtgggagcggccttgtgtcgcaaaagggctgcgcagcagccccagggtcttcaagccaccgctcgtatagggctggacactgccatgaccccgaacaaacccaccctgcaccc                      <  1:364271‑M2/150‑118 (MQ=255)                                                                                                      acaGGAGGGTGGCGCCTTGAAGGTTGGCGCCGtcctgtgggagcggccttgtgtcgcaaaagggctgcgcagcagccccagg                                                                                         >  1:211937‑M2/1‑32 (MQ=255)                                                                                                      acaGGAGGGTGGCGCCTGGAAGGTTGGCGCCGtcctgtgggagcggccttgtgtcgcaaaagggctgcgcagcagccccagg                                                                                         <  2:211937‑M2/82‑51 (MQ=255)                                                                                                         ggaggGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTCGGTGAAGTTGGCCAGGGCCTGTTCGGa                  >  2:128583/1‑150 (MQ=255)                                                                                                                      ttGAAGGTTGGCGCCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTCGGTGAAGTTGGCCAGGGCCTGTTCGGACTCGGCCAGCTTg     >  1:356180/1‑150 (MQ=255)                                                                                                                         aaGGTTGGCGCCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTCCAGCAGCACAAGCGGTAACCATAACGGATAGTATAATTGAATGCTTATATGCGTCTCGGTGAATTTGGCCAGGGCCTGTTCGGACTCGGCCAGCTTGgcg  >  2:253710/1‑150 (MQ=255)                                                                                                                                     |                                                                                                                                          TGGGTTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACCCTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTCGGTGAAGTTGGCCAGGGCCTGTTCGGACTCGGCCAGCTTGGCG  >  NC_002947/1114793‑1115062

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.