| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_002947 | 1,843,935 | G→A | L301F (CTC→TTC) | gacS ← | sensor protein GacS |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,843,935 | 0 | G | A | 100.0% | 40.2 / NA | 14 | L301F (CTC→TTC) | gacS | sensor protein GacS |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (9/5); total (9/5) | |||||||||||
GCCTCGATCTTGGAGAAATCGAGGATCTCGTTGATGATTCCCAGCAAGTTGTCAGCAGACTTCTCGATGGTGTTCAGGTAGTCGAGCTGGCGCGGTGTCATCTCGCTTTTTTGCAGCAGGTGGGTAAAGCCGAGGATGCCATTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAACTCCGACTTGATGCGGCTGGCCTCAAGTGCCTCTTTGCGCGCCATGTCCAGCTCGATGTTCTGGATTTCGATGGTTTCCAGGTTCTGGCGCACGTCTTCGGTGG > NC_002947/1843790‑1844075 | gCCTCGATCTTGGAGAAATCGAGGATCTCGTTGATGATTCCCAGCAAGTTGTCAGCAGACTTCTCGATGGTGTTCAGGTAGTCGAGCTGGCGCGGTGTCATCTCGCTTTTTTGCAGCAGGTGGGTAAAGCCGAGGATGCCATTGAACggg < 2:375851/150‑1 (MQ=255) cTCGATCTTGGAGAAATCGAGGATCTCGTTGATGATTCCCAGCAAGTTGTCAGCAGACTTCTCGATGGTGTTCAGGTAGTCGAGCTGGCGCGGTGTCATCTCGCTTTTTTGCAGCAGGTGGGTAAAGCCGAGGATGCCATTGAACGGGGt > 1:387331/1‑150 (MQ=255) ttGATGATTCCCAGCAAGTTGTCAGCAGACTTCTCGATGGTGTTCAGGTAGTCGAGCTGGCGCGGTGTCATCTCGCTTTTTTGCAGCAGGTGGGTAAAGCCGAGGATGCCATTGAACGGGGTGCGGATTTCGTGGCTCATGTTGGCCAgg > 2:81122/1‑150 (MQ=255) aggatTCCCAGCAAGTTGTCAGCAGACTTCTCGATGGTGTTCAGGTAGTCGAGCTGGCGCGGTGTCATCTCGCTTTTTTGCAGCAGGTGGGTAAAGCCGAGGATGCCATTGAACGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAc < 2:48518/148‑1 (MQ=255) cAGCAAGTTGTCAGCAGACTTCTCGATGGTGTTCAGGTAGTCGAGCTGGCGCGGTGTCATCTCGCTTTTTTGCAGCAGGTGGGTAAAGCCGAGGATGCCATTGAACGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAACTCCGACtt > 2:2192/1‑150 (MQ=255) gTTGTCAGCAGACTTCTCGATGGTGTTCAGGTAGTCGAGCTGGCGCGGTGTCATCTCGCTTTTTTTTTTTTGTTTTGTAAAGCCGAGGATGCCATTGAACGGGGTGCGGATTTCGTGGCTCATGTTTGCTAGGAACTCCGCCTTGATGCg > 2:65118/1‑150 (MQ=37) gcagACTTCTCGATGGTGTTCAGGTAGTCGAGCTGGCGCGGTGTCATCTCGCTTTTTTGCAGCAGGTGGGTAAAGCCGAGGATGCCATTGAACGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAACTCCGACTTGATGCGGCTGGcc > 1:135812/1‑150 (MQ=255) aCTTCTCGATGGTGTTCAGGTAGTCGAGCTGGCGCGGTGTCATCTCGCTTTTTTGCAGCAGGTGGGTAAAGCCGAGGATGCCATTGAACGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAACTCCGACTTGATGCGGCTGGCCTCaa < 1:81122/150‑1 (MQ=255) cTTCTCGATGGTGTTCAGGTAGTCGAGCTGGCGCGGTGTCATCTCGCTTTTTTGCAGCAGGTGGGTAAAGCCGAGGATGCCATTGAACGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAACTCCGACTTGATGCGGCTGGCCTCAAg < 1:2192/150‑1 (MQ=255) tctcGCTTTTTTGCAGCAGGTGGGTAAAGCCGAGGATGCCATTGAACGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAACTCCGACTTGATGCGGCTGGCCTCAAGTGCCTCTTTGCGCGCCATGTCCAGCTCGATGTTCTGGCttt > 1:275939/1‑150 (MQ=255) ttttttGCAGCAGGTGGGTAAAGCCGAGGATGCCATTGAACGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAACTCCGACTTGATGCGGCTGGCCTCAAGTGCCTCTTTGCGCGCCATGTCCAGCTCGATGTTCTGGATTTCGATgg > 2:141479/1‑150 (MQ=255) ttttGCAGCAGGTGGGTAAAGCCGAGGATGCCATTGAACGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAACTCCGACTTGATGCGGCTGGCCTCAAGTGCCTCTTTGCGCGCCATGTCCAGCTCGATGTTCTGGATTTCGATGGtt < 2:135812/150‑1 (MQ=255) gATGCCATTGAACGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAACTCCGACTTGATGCGGCTGGCCTCAAGTGCCTCTTTGCGCGCCATGTCCAGCTCGATGTTCTGGATTTCGATGGTTTCCAGGATCTGGCGCACGTCTTTGGt > 2:272030/1‑150 (MQ=255) tGCCATTGAACGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAACTCCGACTTGATGCGGCTGGCCTCAAGTGCCTCTTTGCGCGCCATGTCCAGCTCGATGTTCTGGATTTCGATGGTTTCCAGGTTCTGGCGCACGTCTTCGGTgg > 1:117721/1‑150 (MQ=255) | GCCTCGATCTTGGAGAAATCGAGGATCTCGTTGATGATTCCCAGCAAGTTGTCAGCAGACTTCTCGATGGTGTTCAGGTAGTCGAGCTGGCGCGGTGTCATCTCGCTTTTTTGCAGCAGGTGGGTAAAGCCGAGGATGCCATTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAACTCCGACTTGATGCGGCTGGCCTCAAGTGCCTCTTTGCGCGCCATGTCCAGCTCGATGTTCTGGATTTCGATGGTTTCCAGGTTCTGGCGCACGTCTTCGGTGG > NC_002947/1843790‑1844075 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |