| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5038212 = | NA (NA) | 9 (0.280) | 8/266 | 2.4 | NA | coding (1256/1536 nt) | PP_4443 | transposase |
| ? | NC_002947 | 5038234 = | NA (NA) | coding (1278/1536 nt) | PP_4443 | transposase | |||||
AAACAACCAGTTCGAGCGCCCGAGTGCCCATGGCCGTATCTGGTTCTCGACCTGATTGTTGTCGATGGGCACAGATCCATCGTCCAGGTAGCGCGTCA‑GCGCTACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5038318‑5038212‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGACGATGGATCTGTGCCCATCGACAACAATCAGGTCGAGAACCAGATACGGCCATGGGCACTCGGGCGCTCGAACTGGTTGTTTGCCGGGTCGCTGCGCAGTGGTAAACGAGCGGCTGCGATCATGAGT > NC_002947/5038234‑5038363 AAACAACCAGTTCGAGCGCCCGAGTGCCCATGGCCGTATCTGGTTCTCGACCTGATTGTTGTCGATGGGCACAGATCCATCGTCCAGGTAGCGCGTCA‑GCGCTACCCGGA > 1:462982/1‑110AAACAACCAGTTCGAGCGCCCGAGTGCCCATGGCCGTATCTGGTTCTCGACCTGATTGTTGTCGATGGGCACAGATCCATCGTCCAGGTAGCGCGTCA‑GCGCTACCCGGA < 2:462982/110‑1 AGTTCGAGCGCCCGAGTGCCCATGGCCGTATCTGGTTCTCGACCTGATTGTTGTCGATGGGCACAGATCCATCGTCCGGGTAGCGCTGAC‑GCGCTACCTGGACGATGGATCTGT < 1:287610/114‑1 AGTTCGAGCGCCCGAGTGCCCATGGCCGTATCTGGTTCTCGACCTGATTGTTGTCGATGGGCACAGATCCATCGTCCGGGTAGCGC‑TGACGCGCTACCTGGACGATGGATCTGT > 2:287610/1‑114 GTTCGAGCGCCCGAGTGCCCATGGCCGTATCTGGTTCTCGACCTGATTGTTGTCGATGGGCACAGATCCATCGTCCGGGTAGCGCTGAC‑GCGCTACCTGGACGATGGATCTGTGC < 1:461812/115‑1 GTTCGAGCGCCCGAGTGCCCATGGCCGTATCTGGTTCTCGACCTGATTGTTGTCGATGGGCACAGATCCATCGTCCGGGTAGCGCTGAC‑GCGCTACCTGGACGATGGATCTGTGC > 2:461812/1‑115 CAGGTAGCGCGTCA‑GCGCTACCTGGACGATGGATCTGTGCCCATCGACAACAATCAGGTCGAGAACCAGATACGGCCATGGGCACTCGGGCGCTCGAACTGGTTGTTTGCCGGGTCGCTGCGCAGTGGTAAACGAGCGGCTGCGGTCATG > 1:440153/1‑150 GTAGCGCGTCA‑GCGCTACCTGGACGATGGATCTGTGCCCATCGACAACAATCAGGTCGAGAACCAGATACGGCCATGGGCACTCGGGCGCTCGAACTGGTTGTTTGCAGGGTAGCTGAGCAGTGGTGAGCGAGGGGCGGCGATCATGAGT > 2:7214/1‑150 GTAGCGCGTCA‑GCGCTACCCGGACGATGGATCTGTGCCCATCGACAACAATCAGGTCGAGAACCAGATACGGCCATGGGCACTCGGGCGCTCGAACTGGTTGTTTGCCGGGTCGCTGCGCAGTGGTAAACGAGCGGCTGCGATCATGAGT > 2:458133/1‑150 AAACAACCAGTTCGAGCGCCCGAGTGCCCATGGCCGTATCTGGTTCTCGACCTGATTGTTGTCGATGGGCACAGATCCATCGTCCAGGTAGCGCGTCA‑GCGCTACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5038318‑5038212‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGACGATGGATCTGTGCCCATCGACAACAATCAGGTCGAGAACCAGATACGGCCATGGGCACTCGGGCGCTCGAACTGGTTGTTTGCCGGGTCGCTGCGCAGTGGTAAACGAGCGGCTGCGATCATGAGT > NC_002947/5038234‑5038363 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |