| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2048853 | 26 (0.820) | 8 (0.290) | 8/232 | 2.1 | 24.8% | intergenic (+49/+90) | PP_1821/PP_1822 | glutathione S‑transferase family protein/hypothetical protein |
| ? | NC_002947 | = 2048910 | 26 (0.940) | intergenic (+106/+33) | PP_1821/PP_1822 | glutathione S‑transferase family protein/hypothetical protein | |||||
GCGCAGCAGGGCGGGTTCGACCTGGCAGACTACCCGGCGGTAAGGGCCTGGCTGGAGCGGGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGACTCATACA > NC_002947/2048706‑2048998 | gcgcAGCAGGGCGGGTTCGACCTGGCAGACTACCCGGCGGTAAGGGCCTGGCTGGAGCGGGTCAGCAGCCACCCGGGTTATGTGCCGATGGTGGGCTGCAAACCAACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTg > 1:258831/1‑150 (MQ=255) agcagGGCGGGTTCGACCTGGCAGACTACCCGGCGGTAAGGGCCTGGCTGGAGCGGGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCcg < 1:189024/150‑1 (MQ=255) ggcggTAAGGGCCTGGCTGGAGCGGGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACgg > 2:352611/1‑128 (MQ=255) ggcggTAAGGGCCTGGCTGGAGCGGGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACgg < 1:352611/128‑1 (MQ=255) gTAAGGGCCTGGCTGGAGCGGGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGt < 1:564242/150‑1 (MQ=255) ggctggAGCGGGTCAACAGCCACCCGCGGCATGTCCAGATGGTGAACCGATAACCTACCTCTTTTCCAGGCGCTAGGGTGATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTcg < 1:181447/150‑1 (MQ=37) tggAGCGGGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCgg < 1:504399/150‑1 (MQ=255) ggAGCGGGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTcgcg < 2:638055/148‑1 (MQ=255) ggAGCGGGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTcgcg > 1:638055/1‑148 (MQ=255) gAGCGGGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGc < 2:756857/150‑1 (MQ=255) tCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGccc < 2:500011/111‑1 (MQ=255) tCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGccc > 1:500011/1‑111 (MQ=255) gcagcCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCGGCTTCGCGGGCTcgcccgctc < 1:639474‑M2/150‑10 (MQ=255) aCCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTcgcccgctcccacaa > 1:32878‑M2/1‑135 (MQ=255) ccGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGtgcccgcgaagcaggcaccgcggtggttggcacggg < 2:485570‑M1/112‑37 (MQ=255) ccGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGtgcccgcgaagcaggcaccgcggtggttggcacggg > 1:485570‑M1/1‑76 (MQ=255) ccGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTcgcccgctcccacaagg > 1:352061‑M2/1‑133 (MQ=255) ccGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTcgcccgctcccacaagg < 2:352061‑M2/150‑18 (MQ=255) aTGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGNAATCCTNGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCgtcag > 1:620772/1‑150 (MQ=255) gAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGagcccgcgaagcaggcaccgcggtggttggcacgggctgcgcccgtgttcgc > 1:387820‑M1/1‑51 (MQ=255) gAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGagcccgcgaagcaggcaccgcggtggttggcacgggctgcgcccgtgttcgc < 2:387820‑M1/103‑53 (MQ=255) gAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATggcg > 1:553410/1‑150 (MQ=255) gAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATggcg < 1:422483/150‑1 (MQ=255) cTGTTTCCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGagcccgcgaagcaggcaccgcggtggttggcacgggctgcgcccgtgttcgcgggcacgc > 1:527879‑M1/1‑41 (MQ=255) cTGTTTCCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGagcccgcgaagcaggcaccgcggtggttggcacgggctgcgcccgtgttcgcgggcacgc < 2:527879‑M1/101‑61 (MQ=255) tGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTc > 2:602164/1‑150 (MQ=255) ccAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGCGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAg < 2:222840/150‑1 (MQ=255) cAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAgg > 1:361224/1‑150 (MQ=255) aGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGagcccgcgaagcaggcaccgcggtggttggcacgggctgcgcccgtgt < 1:490663‑M1/80‑49 (MQ=255) aGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGagcccgcgaagcaggcaccgcggtggttggcacgggctgcgcccgtgt > 2:490663‑M1/1‑32 (MQ=255) aGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCt > 1:571145/1‑111 (MQ=255) aGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCt < 2:571145/111‑1 (MQ=255) aGGCGCTTGCGCAATCCTTGTGGACGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGt > 1:312480/1‑150 (MQ=255) gcgcTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCCCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTaa > 2:524208/1‑150 (MQ=255) gcAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCgatgat > 2:3549/1‑150 (MQ=255) tCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATTGcc < 2:553410/150‑1 (MQ=255) ccTTGTGGGAGCGGGCGagcccgcgaagcaggcaccgcggtggttggcacgggctgcgcccgtgttcgcgggcacgcccgctcccacaaggattgcgcaagcgcctggaaaacaggtcggttttcagcccaccatcggcacatgccgcgg > 1:352061‑M1/1‑17 (MQ=255) ccTTGTGGGAGCGGGCGagcccgcgaagcaggcaccgcggtggttggcacgggctgcgcccgtgttcgcgggcacgcccgctcccacaaggattgcgcaagcgcctggaaaacaggtcggttttcagcccaccatcggcacatgccgcgg < 2:352061‑M1/150‑134 (MQ=255) ttGTGGGAGCGGGCGagcccgcgaagcaggcaccgcggtggttggcacgggctgcgcccgtgttcgcgggcacgcccgctcccacaaggattgcgcaagcgcctggaaaacaggtcggttttcagcccaccatcggcacatgccgcgggt > 1:32878‑M1/1‑15 (MQ=255) ggAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGAGGATTGACTTGGACTc > 1:239921/1‑150 (MQ=255) gAGCGGGCGagcccgcgaagccggcaccgcggtggttggcacgggctgcgcccgtgttcgcgggcacgcccgctcccacaaggattgcgcaagcgcctggaaaacaggtcggttttcagcccaccatcggcacatgccgcgggtggctgc < 1:639474‑M1/150‑142 (MQ=255) gagCGTGACGGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGACTCATACa < 2:225732/148‑1 (MQ=255) gCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTcgcccgctcccacaaggattgcgcaagcgcctgggaaacag < 2:527879‑M2/101‑42 (MQ=255) gCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTcgcccgctcccacaaggattgcgcaagcgcctgggaaacag > 1:527879‑M2/1‑60 (MQ=255) | GCGCAGCAGGGCGGGTTCGACCTGGCAGACTACCCGGCGGTAAGGGCCTGGCTGGAGCGGGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGACTCATACA > NC_002947/2048706‑2048998 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |