New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	203692 =	NA (NA)	8 (0.260)	7/258	2.6	NA	coding (9198/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	203763 =	NA (NA)					coding (9269/26049 nt)	PP_0168	putative surface adhesion protein

CCGTCGGTCACCGAAGGCGGCGAGATCACTTACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCAACCGTGACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCG  >  NC_002947/203618‑203837                                                                                                                                                  |                                                                           ccGTCGGTCACCGAAGGCGGCGAGATCACTTACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACt                                                                        <  2:252965/150‑1 (MQ=35)          aCCGAAGGCGGCGAGATCACTTACACCATCACCCTGACCAACAAAGATGGTCTGCCCATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCAACCGTg                                                               >  2:522066/1‑150 (MQ=25)                             cTTACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCAACCGTGACTGCCCCGGACAACGTCt                                            >  1:299830/1‑150 (MQ=40)                              ttACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCCCCGTGGGCACTGCAACCGTGACTGCCCCGGACAACGTCTa                                           <  1:466183/150‑1 (MQ=38)                              ttACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGCGAGGATCGCCATCACCGTGCCGGCCAACGGCCCAGTGGGAAATGCTACCAGGAGAGCCCCGGACAACGTCTa                                           >  1:219830/1‑150 (MQ=11)                                     aTCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCAACGTGCCGGCCAACGGCACCGTTGGCACTGCCACCGTGACTGCCCGGGACAAGGTCTACGtggta                                    >  2:223459/1‑146 (MQ=11)                                          ccTGACCAACAAAGATGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGGAAAGTCGGCACTGCAACCGTGACTGCCCCGGACAACGTCTACGTCGGTACCaa                               >  1:49666/1‑150 (MQ=255)                                                caacaaAGATGGTCTGCCGATCAACAACCACAGTGGATTGACCTTCACGGTGAGCGACGGTAAAACCGTCATACCCGTGCAGGCCAACGGCACCGTGGGCACTGCAACCGTGACTGCCCCGGACACCGTCTACGTCCGTACCAACGAccc                         >  2:256/1‑150 (MQ=11)                                                 aacaaAGATGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCAACCGTGACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCt                        <  1:709662/150‑1 (MQ=39)                                                    aaaGATGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCAACCGTGACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCtgtg                     >  1:51875/1‑150 (MQ=38)                                                     aaGATGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCAACCGTGACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGa                    <  1:522066/150‑1 (MQ=37)                                                           gTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCAACCGTGACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAat              >  2:442597/1‑150 (MQ=35)                                                              tGCCGATCAACAACCAAAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCAACCGTGACTGCCCCGGACAACGTCTACGTAGGTACCAACGACCCTGTGATCCAatcga           <  1:223459/150‑1 (MQ=12)                                                                ccGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCAACCGTGACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAatcgatc         <  2:124393/150‑1 (MQ=32)                                                                 cGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCAACCGTGACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAatcgatcg        >  1:459103/1‑150 (MQ=32)                                                                 cGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCAACCGTGACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAatcgatcg        <  2:459103/150‑1 (MQ=32)                                                                    tCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCAACCGTGACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGa                    <  1:347384/135‑1 (MQ=33)                                                                    tCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCAACCGTGACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGa                    >  2:347384/1‑135 (MQ=33)                                                                       acaacCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCAACCGTGAc                                                             >  2:578654/1‑91 (MQ=32)                                                                       acaacCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCAACCGTGAc                                                             <  1:578654/91‑1 (MQ=32)                                                                       acaacCACAGTGCATTGACCTTCACGATGCAGAACTGCAGAAAAAAGGTCACCTTGCCGGCCAACGGCACCGTGGGCCCTCCACCCGTGACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCCAAGCAAGCGCAACCg  >  1:459317/1‑150 (MQ=2)                                                                                                                                                  |                                                                           CCGTCGGTCACCGAAGGCGGCGAGATCACTTACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCAACCGTGACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCG  >  NC_002947/203618‑203837

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.