| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,100,612 | Δ1 bp | 5.3% | coding (1348/1470 nt) | PP_2709 → | long‑chain fatty acid‑‑CoA ligase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,100,612 | 0 | G | . | 5.3% | 247.9 / 7.1 | 76 | coding (1348/1470 nt) | PP_2709 | long‑chain fatty acid‑‑CoA ligase |
| Reads supporting (aligned to +/- strand): ref base G (39/33); new base . (2/2); total (41/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.87e-01 | |||||||||||
GTGTGATCGCCCAGGCTTTCGTGCATGGCGAAGCCTTGCCACGCAACCTTGCCTTGCTCTGGCCGCTGGATCCCGGCATCAGCGACGAGGCCATCGAACAGGCCGTACAGCAATGCAACGCGCGATTGCCCGATTACGCCAGG‑GTGCACGCCTGGCGCCGCTTGCCAGTGCCTCTTAGCACGCTTGACGAAACCCTGACTGCCAATGGCCGCCCGCGACGTGAGGCGATCTTGCAGCGTTACCACACCCTGTTGTCCGACATCTCGTTGTGAGGTTCACAATGTCCTTTTTCGACACCC > NC_002947/3100463‑3100761 | gtgtGATCGCCCAGGCTTTCGTGCATGGCGAAGCCTTGCCACGCAACCTTGCCTTGCTCTGGCCGCTGGATCCCGGCATCAGCGACGAGGCCATCGAACAGGCCGTACAGCAATGCAACGCGCGATTGCCCGATTACGCCAGG‑GTGCACg > 1:934579/1‑150 (MQ=255) aTCGCCCAGGCTTTCGTGCATGGCGAAGCCTTGCCACGCAACCTTGCCTTGCTCTGGCCGCTGGATCCCGGCATCAGCGACGAGGCCATCGAACAGGCCGTACAGCAATGCAACGCGCGATTGCCCGATTACGCCAGG‑GTGCACGCCTgg > 1:937891/1‑150 (MQ=255) gCCCAGGCTTTCGTGCATGGCGAAGCCTTGCCACGCAACCTTGCCTTGCTCTGGCCGCTGGATCCCGGCATCAGCGACGAGGCCATCGAACAGGCCGTACAGCAATGCAACGCGCGATTGCCCGATTACGCCAGG‑GTGCACGCCTGgcgc < 2:691056/150‑1 (MQ=255) ccAGGCTTTCGTGCATGGCGAAGCCTTGCCACGCAACCTTGCCTTGCTCTGGCCGCTGGATCCCGGCATCAGCGACGAGGCCATCGAACAGGCCGTACAGCAATGCAACGCGCGATTGCCCGATTACGCCAGG‑GTGCACGCCTGgcgtaa < 2:367331/150‑4 (MQ=255) ccAGGCTTTCGTGCATGGCGAAGCCTTGCCACGCAACCTTGCCTTGCTCTGGCCGCTGGATCCCGGCATCAGCGACGAGGCCATCGAACAGGCCGTACAGCAATGCAACGCGCGATTGCCCGATTACGCCAGG‑GTGCACGCCTGGcgccg > 2:1066243/1‑150 (MQ=255) ccAGGCTTTCGTGCATGGCGAAGCCTTGCCACGCAACCTTGCCTTGCTCTGGCCGCTGGATCCCGGCATCAGCGACGAGGCCATCGAACAGGCCGTACAGCAATGCAACGCGCGATTGCCCGATTACGCCAGG‑GTGCACGCCTGGcgccg > 2:1555746/1‑150 (MQ=255) ggCTTTCGTGCATGGCGAAGCCTTGCCACGCAACCTTGCCTTGCTCTGGCCGCTGGATCCCGGCATCAGCGACGAGGCCATCGAACAGGCCGTACAGCAATGCAACGCGCGATTGCCCGATTACGCCAGG‑GTGCACGCCTGGCGCCGCtt > 2:133118/1‑150 (MQ=255) gCTTTCGTGCATGGCGAAGCCTTGCCACGCAACCTTGCCTTGCTCTGGCCGCTGGATCCCGGCATCAGCGACGAGGCCATCGAACAGGCCGTACAGCAATGCAACGCGCGATTGCCCGATTACGCCAGGCGTGCAC‑CCTGgc > 1:457653/1‑142 (MQ=255) gCTTTCGTGCATGGCGAAGCCTTGCCACGCAACCTTGCCTTGCTCTGGCCGCTGGATCCCGGCATCAGCGACGAGGCCATCGAACAGGCCGTACAGCAATGCAACGCGCGATTGCCCGATTACGCCAGGCGTGCAC‑CCTGgc < 2:457653/142‑1 (MQ=255) cTTTCGTGCATGGCGAAGCCTTGCCACGCAACCTTGCCTTGCTCTGGCCGCTGGATCCCGGCATCAGCGACGAGGCCATCGATCTGGCCGGACATCAATGCAACGCGCGATTGCCCGATTACGCCAGG‑GTGCACGCCTGGCGCCGCTTGc < 2:604273/150‑1 (MQ=255) cTTTCGTGCATGGCGAAGCCTTGCCACGCAACCTTGCCTTGCTCTGGCCGCTGGATCCCGGCATCAGCGACGAGGCCATCGAACAGGCCGTACAGCAATGCAACGCGCGATTGCCCGATTACGCCAGG‑GTGCACGCCTGGCGCCGCTTGc < 1:1066243/150‑1 (MQ=255) cGTGCATGGCGAAGCCTTGCCACGCAACCTTGCCTTGCTCTGGCCGCTGGATCCCGGCATCAGCGACGAGGCCATCGAACAGGCCGTACAGCAATGCAACGCGCGATTGCCCGATTACGCCAGG‑GTGCACGCCTGGCGCCGCTTGCCAGt < 2:934579/150‑1 (MQ=255) tGGCGAAGCCTTGCCACGCAACCTTGCCTTGCTCTGGCCGCTGGATCCCGGCATCAGCGACGAGGCCATCGAACAGGCCGTACAGCAATGCAACGCGCGATTGCCCGATTACGCCAGG‑GTGCACGCCTGGcgcc > 2:538731/1‑134 (MQ=255) tGGCGAAGCCTTGCCACGCAACCTTGCCTTGCTCTGGCCGCTGGATCCCGGCATCAGCGACGAGGCCATCGAACAGGCCGTACAGCAATGCAACGCGCGATTGCCCGATTACGCCAGG‑GTGCACGCCTGGcgcc < 1:538731/134‑1 (MQ=255) gCGAAGCCTTGCCACGCAACCCTGCCTTGCTCTGGCCGCTGGATCCCGGCATCAGCGACGAGGCCATCGAACAGGCCGTACAGCAATGCAACGCGCGATTGCCCGATTACGCCAGG‑GTGCACGCCTGGCGCCGCTTGCCAGTGCCTCTTa > 2:1717339/1‑150 (MQ=255) ccTTGCCACGCAACCTTGCCTTGCTCTGGCCGCTGGATCCCGGCATCAGCGACGAGGCCATCGAACAGGCCGTACAGCAATGCAACGCGCGATTGCCCGATTACGCCAGN‑GTGCACGCCTGGCGCCGCTTGCCAGTGCCTCTTAGCACGc < 1:1657815/150‑1 (MQ=255) cTTGCCACGCAACCTTGCCTTGCTCTGGCCGCTGGATCCCGGCATCAGCGACGAGGCCATCGAACAGGCCGTACAGCAATGCAACGCGCGATTGCCCGATTACGCCAGG‑GTGCACGCCTGGCGCCGCtt > 2:1126893/1‑129 (MQ=255) cTTGCCACGCAACCTTGCCTTGCTCTGGCCGCTGGATCCCGGCATCAGCGACGAGGCCATCGAACAGGCCGTACAGCAATGCAACGCGCGATTGCCCGATTACGCCAGA‑GTGCACGCCTGGCGCCGCtt < 1:1126893/129‑1 (MQ=255) ttGCCACGCAACCTTGCCTTGCTCTGGCCGCTGGATCCCGGCATCAGCGACGAGGCCATCGAACAGGCCGTACAGCAATGCAACGCGCGATTGCCCGATTACGCCAGG‑GTGCACGCCTGGCGGCGCTTGCCAGTGCCTCTTAGCACGCtt > 1:1082537/1‑150 (MQ=255) ttGCCACGCAACCTTGCCTTGCTCTGGCCGCTGGATCCCGGCATCAGCGACGAGGCCATCGAACAGGCCGTACAGCAATGCAACGCGCGATTGCCCGATTACGCCAGG‑GTGCACGCCTGGCGCCGCTTGCCAGTGCCTATTAGCACGCtt > 2:964686/1‑150 (MQ=255) aCGCAACCTTGCCTTGCTCTGGCCGCTGGATCCCGGCATCAGCGACGAGGCCATCGAACAGGCCGTACAGCAATGCAACGCGCGATTGCCCGATTACGCCAGG‑GTGCACGCCTGGCGCCGCTTGCCAGTGCCTCTTAGCACGCTTGAcaa > 1:1003426/1‑148 (MQ=255) ccttgccttgCTCTGGCCGCTGGATCCCGGCATCAGCGACGAGGCCATCGAACAGGCCGTACAGCAATGCAACGCGCGATTGCCCGATTACGCCAGG‑GTGCACGCCTGGCGCCGCTTGCCAGTGCCTCTTAGCACGCTTGACGAAACCCt > 1:754847/1‑150 (MQ=255) cttgccttgcTCTGGCCGCTGGATCCCGGCATCAGCGACGAGGCCATCGAACAGGCCGTACAGCAATGCAACGCGCGATTGCCCGATTACGCCAGG‑GTGCACGCCTGGCGCCGCTTGc > 1:1034463/1‑118 (MQ=255) cttgccttgcTCTGGCCGCTGGATCCCGGCATCAGCGACGAGGCCATCGAACAGGCCGTACAGCAATGCAACGCGCGATTGCCCGATTACGCCAGG‑GTGCACGCCTGGCGCCGCTTGc < 2:1034463/118‑1 (MQ=255) ttgccttgcTCTGGCCGCTGGATCCCGGCATCAGCGACGAGGCCATCGAACAGGCCGTACAGCAATGCAACGCGCGATTGCGCGATTACGCCAGG‑GTGCACGCCTGGCGCCGCTTGCCAGTGc > 1:1912941/1‑123 (MQ=255) ttgccttgcTCTGGCCGCTGGATCCCGGCATCAGCGACGAGGCCATCGAACAGGCCGTACAGCAATGCAACGCGCGATTGCGCGATTACGCCAGG‑GTGCACGCCTGGCGCCGCTTGCCAGTGc < 2:1912941/123‑1 (MQ=255) ttgccttgcTCTGGCCGCTGGATCCCGGCATCAGCGACGAGGCCATCGAACAGGCCGTACAGCAATGCAACGCGCGATTGCCCGATTACGCCAGG‑GTGCACGCCTGGCGCCGCTTGCCAGTGCCTCTTAGCACGCTTGACGAAACCCTGa < 2:1082537/150‑1 (MQ=255) cttgcTCTGGCCGCTGGATCCCGGCATCAGCGACGAGGCCATCGAACAGGCCGTACAGCAATGCAACGCGCGATTGCCCGATTACGCCAGG‑GTGCACGCCTGGCGCCGCTTGCCAGTGCCTCTTAGCACGCTTGACGAAACCCTGACTGc > 1:1154607/1‑150 (MQ=255) ttgcTCTGGCCGCTGGATCCCGGCATCAGCGACGAGGCCATCGAACAGGCCGTACAGCAATGCAACGCGCGATTGCCCGATTACGCCAGG‑GTGCACGCCTGGCGCCGCTTGCCAGTGCCTCTTAGCACGCTTGACGAAACCCTGACTGcc > 2:854882/1‑150 (MQ=255) ttgcTCTGGCCGCTGGATCCCGGCATCAGCGACGAGGCCATCGAACAGGCCGTACAGCAATGCAACGCGCGATTGCCCGATTACGCCAGG‑GTGCACGCCTGGCGCCGCTTGCCAGTGCCTCTTAGCACGCTTGACGAAACCCTGACTGcc > 1:1785308/1‑150 (MQ=255) tGGCCGCTGGATCCCGGCATCAGCGACGAGGCCATCGAACAGGCCGTACAGCAATGCAACGCGCGATTGCCCGATTACGCCAGG‑GTGCACGCCTGGCGCCGCTTGcc > 2:1640498/1‑107 (MQ=255) tGGCCGCTGGATCCCGGCATCAGCGACGAGGCCATCGAACAGGCCGTACAGCAATGCAACGCGCGATTGCCCGATTACGCCAGG‑GTGCACGCCTGGCGCCGCTTGcc < 1:1640498/107‑1 (MQ=255) tGGCCGCTGGATCCCGGCATCAGCGACGAGGCCATCGAACAGGCCGTACAGCAATGCAACGCGCGATTGCCCGATTACGCCAGG‑GTGCACGCCTGGCGCCGCTTGCCa < 1:63359/108‑1 (MQ=255) tGGCCGCTGGATCCCGGCATCAGCGACGAGGCCATCGAACAGGCCGTACAGCAATGCAACGCGCGATTGCCCGATTACGCCAGG‑GTGCACGCCTGGCGCCGCTTGCCa > 2:63359/1‑108 (MQ=255) gATCCCGGCATCAGCGACGAGGCCATCGAACAGGCCGTACAGCAATGCAACGCGCGATTGCCCGATTACGCCACG‑GCGCACGCCTGGCGCCGCTTGCCAGTGCCTCTTAGCACGCTTGACGAAACCCTGACTGCCAATGGCCGCCcgcgc > 1:1776003/1‑149 (MQ=255) aTCCCGGCATCAGCGACGAGGCCATCGAACAGGCCGTACAGCAATGCAACGCGCGATTGCCCGATTACGCCAGG‑GTGCACGCCTGGCGCCGCTTGCCAGTGCCTCTTAGCACGCTTGACGAAACCCTGACTGCCAATGGCCGCCCGCGAc > 2:1239135/1‑150 (MQ=255) ccGGCATCAGCGACGAGGCCATCGAACAGGCCGTACAGCAATGCAACGCGCGATTGCCCGATTACGCCAGG‑GTGCACGCCTGGCGCCGCTTGCCAGTGCCTCTTAGCACGCTTGACGAAACCCTGACTGCCAATGGCCGCCCGCGACGTg > 2:1168665/1‑150 (MQ=255) cGGCATCAGCGACGAGGCCATCGAACAGGCCGTACAGCAATGCAACGCGCGATTGCCCGATTACGCCAGG‑GTGCACGCCTGGCGCCGCTTGCCAGTGCCTCTTAGCACGCTTGACGAAACCCTGACTGCCAATGGCCGCCCGCGACGTGa > 2:939946/1‑150 (MQ=255) gCGACGAGGCCATCGAACAGGCCGTACAGCAATGCAACGCGCGATTGCCCGATTACGCCAGG‑GTGCACGCCTGGCGCCGCTTGCCAGTGCCTCTTAGCACGCTTGACGAAACCCTGACTGCCAATGGCCGCCCGCGACGTGAGGCGATCt > 2:1861752/1‑150 (MQ=255) acgaGGCCATCGAACAGGCCGTACAGCAATGCAACGCGCGATTGCCCGATTACGCCAGG‑GTGCACGCCTGGCGCCGCTTGCCAGTGCCTCTTAGCACGCTTGACGAAACCCTGACTGCCAATGGCCGCCCGCGACGTGAGGCGATCTTGc < 1:1555746/150‑1 (MQ=255) acgaGGCAATCGAACAGGCCGTACAGCAATGCAACGCGCGATTGCCCGATTACGCCAGG‑GTGTACGCCTGGCGCCGCTTGCCAGTGCCTCTTAGCACGCTTGa < 1:512934/103‑1 (MQ=255) acgaGGCAATCGAACAGGCCGTACAGCAATGCAACGCGCGATTGCCCGATTACGCCAGG‑GTGTACGCCTGGCGCCGCTTGCCAGTGCCTCTTAGCACGCTTGa > 2:512934/1‑103 (MQ=255) cgaGGCCATCGAACAGGCCGTACAGCAATGCAACGCGCGATTGCCCGATTACGCCAGG‑GTGCACGCCTGGCGCCGCTTGCCAGTGCCTCTTAGCACGCTTGACGAAACCCTGACTGCCAATGGCCGCCCGCGACGTGAGGCGATCTTGCa < 1:1861752/150‑1 (MQ=255) cgaGGCCATCGAACAGGCCGTACAGCAATGCAACGCGCGATTGCCCGATTACGCCAGG‑GTGCACGCCTGGCGCCGCTTGCCAGTGCCTCTTAGCACGCTTGACGAAACCCTGACTGCCAATGGCCGCCCGCGACGTGAGGCGATCTTGCa < 2:1431583/150‑1 (MQ=255) cgaGGCCATCGAACAGGCCGTACAGCAATGCAACGCGCGATTGCCCGATTACGCCAGG‑GTGCACGCCTGGCGCCGCTTGCCAGTGCCTCTTAGCACGCTTGACAAAACCCTGACTGCCAATGGCCGCCCGCGACGTGAGGCGATCTTGCa < 2:1003426/150‑1 (MQ=255) aTCGAACAGGCCGTACAGCAATGCAACGCGCGATTGCCCGATTACGCCAGG‑GTGCACGCCTGGCGCCGCTTGCCAGTGCCTCTTAGCACGCTTGACGAAACCCTGACTGCCAATGGCCGCCCGCGACGTGAGGCGATCTTGCAGCGTTAc > 2:668687/1‑150 (MQ=255) cGAACAGGCCGTACAGCAATGCAACGCGCGATTGCCCGATTACGCCAGG‑GTGCACGCCTGGCGCCGCTTGCCAGTGCCTCTTAGCACGCTTGACGAAACCCTGACTGCCAATGGCCGCCCGCGACGTGAGGCGATCTTGCAGCGTTACca > 2:1532073/1‑150 (MQ=255) aaCAGGCCGTACAGCAATGCAACGCGCGATTGCCCGATTACGCCAGG‑GTGCACGCCTGGCGCCGCTTGCCAGTGCCTCTTAGCACGCTTGACGAAACCCTGACTGCCAATGGCCGCCCGCGACGTGAGGCGATCTTGCAGCGTTACcaca > 1:555848/1‑150 (MQ=255) aGGCCGTACAGCAATGCAACGCGCGATTGCCCGATTACGCCAGG‑GTGCACGCCTGGCGCCGCTTGCCAGTGCCTCTTAGCACGCTTGACGAAACCCTGACTGCCAATGGCCGCCCGCGACGTGAGGCGATCTTGCAGCGTTACCACAccc < 1:1532073/150‑1 (MQ=255) ggCCGTACAGCAATGCAACGCGCGATTGCCCGATTACGCCAGG‑GTGCACGCCTGGCGCCGCTTGCCAGTGCCTCTTAGCACGCTTGACGAAACCCTGACTGCCAATGGCCGCCCGCGACGTGAGGCGATCTTGCAGCGTTACCACACCCt < 1:668687/150‑1 (MQ=255) ccGTACAGCAATGCAACGCGCGATTGCCCGATTACGCCAGG‑GTGCACGCCTGGCGCCGCTTGCCAGTGCCTCTTAGCACGCTTGACGAAACCCTGACTGCCAATGGCCGCCCGCGACGTGAGGCTATCTTGCAGCGTTACCACACCCtgt < 1:1231772/150‑1 (MQ=255) aGCAATGCAACGCGCGATTGCCCGATTACGCCAGG‑GTGCACGCCTGGCGCCGCTTGCCAGTGCCTCTTAGCACGCTTGACGAAACCCTGACTGCCAATGGCCGCCCGCGACGTGAGGCGATCTTGCAGCGTTACCACACCCTGTTGTCCg > 1:1865390/1‑150 (MQ=255) gCAATGCAACGCGCGATTGCCCGATTACGCCAGG‑GTGCACGCCTGGCGCCGCTTGCCAGTGCCTATTAGCACGCTTGACGAAACCCTGACTGCCAATGGCCGCCCGCGACGTGAGGCGATCTTGCAGCGTTACCACACCCTGTTGTCCGa < 1:964686/150‑1 (MQ=255) aTGCAACGCGCGATTGCCCGATTACGCCAGG‑GTGCACGCCTGGCGCCGCTTGCCAGTGCCTCTTAGCACGCTTGACGAAACCCTGACTGCCAATGGCCGCCCGCGACGTGAGGCGATCTTGCAGCGTTAc > 2:960973/1‑130 (MQ=255) aTGCAACGCGCGATTGCCCGATTACGCCAGG‑GTGCACGCCTGGCGCCGCTTGCCAGTGCCTCTTAGCACGCTTGACGAAACCCTGACTGCCAATGGCCGCCCGCGACGTGAGGCGATCTTGCAGCGTTAc < 1:960973/130‑1 (MQ=255) tGCAACGCGCGATTGCCCGATTACGCCAGG‑GTGCACGCCTGGCGCCGCTTGCCAGTGCCTCTTAGCACGCTTGACGAAACCCTGACTGCCAATGGCCGCCCGCGACGTGAGGCGATCTTGCAGCGTTACCACACCCTGTTGTCCGACAtc > 2:698234/1‑150 (MQ=255) aCGCGCGATTGCCCGATTACGCCAGG‑GTGCACGCCTGGCGCCGCTTGCCAGTGCCTCTTAGCACGCTTGACGAAACCCTGACTGCCAATGGCCGCCCGCGACGTGAGGCGATCTTGCAGCGTTACCACACCCTGTTGTCCGACATCTCGt < 2:1865390/150‑1 (MQ=255) cgcgcgATTGCCCGATTACGCCAGG‑GTGCACGCCTGGCGCCGCTTGCCAGTGCCTCTTAGCACGCTTGACGAAACCCTGACTGCCAATGGCCGCCCGCGACGTGAGGCGATCTTGCAGCGTTACCACACCCTGTTGTCCGACATCTCGtt < 2:555848/150‑1 (MQ=255) gATTGCCCGATTACGCCAGG‑GTGCACGCCTGGCGCCGCTTGCCAGTGCCTCTTAGCACGCTTGACGAAACCCTGACTGCCAATGGCCGCCCGCGACGTGAGGCGATCTTGCAGCGTTACCACACCCTGTTGTCCGACATCTCGTTGTGAg > 1:219853/1‑150 (MQ=255) gATTGCCCGATTACGCCAGG‑GTGCACGCCTGGCGCCGCTTGCCAGTGCCTCTTAGCACGCTTGACGAAACCCTGACTGCCAATGGCCGCCCGCGACGTGAGGCGATCTTGCAGCGTTACCACACCCTGTTGTCCGACATCTCGTTGTGAg > 2:656797/1‑150 (MQ=255) ccGATTACGCCAGG‑GTGCACGCCTGGCGCCGCTTGCCAGTGCCTCTTAGCACGCTTGACGAAACCCTGACTGCCAATGGCCGCCCGCGACGTGAGGCGATCTTGCAGCGTTACCACACCCTGTTGTCCGACATCTCGTTGTGAGGTTcac > 2:242867/1‑150 (MQ=255) aagcggcGCCAGGCGTGCAC‑CCTGGCGCCGCTTGCCAGTGCCTCTTAGCACGCTTGACGAAACCCTGACTGCCAATGGCCGCCCGCGACGTGAGGCGATCTTGCAGCGTTACCACACCCTGTTGTCCGACATCTCGTTGTGa < 2:1322880/136‑1 (MQ=255) aagcggcGCCAGGCGTGCAC‑CCTGGCGCCGCGTGCCAGTGCCTCTTAGCACGCTTGACGAAACCCTGACTGCCAATGGCCGCCCGCGACGTGAGGCGATCTTGCAGCGTTACCACACCCTGTTGTCCGACATCTCGTTGTGa > 1:1322880/7‑142 (MQ=255) gATTACGCCAGG‑GTGCACGCCTGGCGCCGCTTGCCAGTGCCTCTTAGCACGCTTGACGAAACCCTGACTGCCAATGGCCGCCCGCGACGTGAGGCGATCTTGCAGCGTTACCACACCCTGTTGTCCGACAGCTCGTTGTGAGGTTCACaa < 1:1641630/150‑1 (MQ=255) aTTACGCCAGG‑GTGCACGCCTGGCGCCGCTTGCCAGTGCCTCTTAGCACGCTTGACGAAACCCTGACTGCCAATGGCCGCCCGCGACGTGAGGCGATCTTGCAGCGTTACCACACCCTGTTGTCCGACATCTCGTTGTGAGGTTCACAAt < 1:1239135/150‑1 (MQ=255) gCCAGG‑GTGCACGCCTGGCGCCGCTTGCCAGTGCCTCTTAGCACGCTTGACGAAACCCTGACTGCCAATGGCCGCCCGCGACGTGAGGCGATCTTGCAGCGTTACCACACCCTGTTGTCCGACATCTCGTTGTGAGGTTCACAATGTCCt > 2:602381/1‑150 (MQ=255) cAGG‑GTGCACGCCTGGCGCCGCTTGCCAGTGCCTCTTAGCACGCTTGACGAAACCCTGACTGCCAATGGCCGCCCGCGACGTGAGGCGATCTTGCAGCGTTAc < 1:1863810/103‑1 (MQ=255) cAGG‑GTGCACGCCTGGCGCCGCTTGCCAGTGCCTCTTAGCACGCTTGACGAAACCCTGACTGCCAATGGCCGCCCGCGACGTGAGGCGATCTTGCAGCGTTAc > 2:1863810/1‑103 (MQ=255) cAGG‑GTGCACGCCTGGCGCCGCTTGCCAGTGCCTCTTAGCACGCTTGACGAAACCCTGACTGCCAATGGCCGCCCGCGACGTGAGGCGATCTTGCAGCGTTACCACACCCTGTTGTCCGACATCTCGTTGTGAGGTTca < 2:1082932/139‑1 (MQ=255) cAGG‑GTGCACGCCTGGCGCCGCTTGCCAGTGCCTCTTAGCACGCTTGACGAAACCCTGACTGCCAATGGCCGCCCGCGACGTGAGGCGATCTTGCAGCGTTACCACACCCTGTTGTCCGACATCTCGTTGTGAGGTTca > 1:1082932/1‑139 (MQ=255) cAGG‑GTGCACGCCTGGCGCCGCTTGCCAGTGCCTCTTAGCACGCTTGACGAAACCCTGACTGCCAATGGCCGCCCGCGACGTGAGGCGATCTTGCAGCGTTACCACACCCTGTTGTCCGACATCTCGTTGTGAGGTTCACAATGTCCttt > 2:949863/1‑150 (MQ=255) g‑gTGCACGCCTGGCGCCGCTTGCCAGTGCCTCTTAGCACGCTTGACGAAACCCTGACTGCCAATGGCCGCCCGCGACGTGAGGCGATCTTGCAGCGTTACCACACCCTGTTGTCCGACATCTCGTTGTGAGGTTCACAATGTCCTTTTTc < 1:939946/150‑1 (MQ=255) cACGCCTGGCGCCGCTTGCCAGTGCCTCTTAGCACGCTTGACGAAACCCTGACTGCCAATGGCCGCCCGCGACGTGAGGCGATCTTGCAGCGTTACCACACCCTGTTGTCCGACATCTCGTTGTGa < 2:124226/126‑1 (MQ=255) cACGCCTGGCGCCGCTTGCCAGTGCCTCTTAGCACGCTTGACGAAACCCTGACTGCCAATGGCCGCCCGCGACGTGAGGCGATCTTGCAGCGTTACCACACCCTGTTGTCCGACATCTCGTTGTGa > 1:124226/1‑126 (MQ=255) cACGCCTGGCGCCGCTTGCCAGTGCCTCTTAGCACGCTTGACGAAACCCTGACTGCCAATGGCCGCCCGCGACGTGAGGCGATCTTGCAGCGTTACCACACCCTGTTGTCCGACATCTCGTTGTGAGGTTCACAATGTCCTTTTTCGaca < 1:698234/150‑1 (MQ=255) aCGCCTGGCGCCGCTTGCCAGTGCCTCTTAGCACGCTTGACGAAACCCTGACTGCCaa < 2:799402/58‑1 (MQ=255) aCGCCTGGCGCCGCTTGCCAGTGCCTCTTAGCACGCTTGACGAAACCCTGACTGCCaa > 1:799402/1‑58 (MQ=255) gCCTGGCGCCGCTTGCCAGTGCCTCTTAGCACGCTTGACGAAACCCTGACTGCCAATGGCCGCCCGCGACGTGAGGCGATCTTGCAGCGTTACCACACCCTGTTGTCCGACATCTCGTTGTGAGGTTCACAATGTCCTTTTTCGACAccc < 2:754847/150‑1 (MQ=255) | GTGTGATCGCCCAGGCTTTCGTGCATGGCGAAGCCTTGCCACGCAACCTTGCCTTGCTCTGGCCGCTGGATCCCGGCATCAGCGACGAGGCCATCGAACAGGCCGTACAGCAATGCAACGCGCGATTGCCCGATTACGCCAGG‑GTGCACGCCTGGCGCCGCTTGCCAGTGCCTCTTAGCACGCTTGACGAAACCCTGACTGCCAATGGCCGCCCGCGACGTGAGGCGATCTTGCAGCGTTACCACACCCTGTTGTCCGACATCTCGTTGTGAGGTTCACAATGTCCTTTTTCGACACCC > NC_002947/3100463‑3100761 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |