| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,644,643 | Δ1 bp | 5.9% | intergenic (+73/‑56) | yhiN → / → PP_4954 | FAD/NAD(P)‑binding domain‑containing oxidoreductase/membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,644,643 | 0 | C | . | 5.9% | 311.3 / 14.6 | 102 | intergenic (+73/‑56) | yhiN/PP_4954 | FAD/NAD(P)‑binding domain‑containing oxidoreductase/membrane protein |
| Reads supporting (aligned to +/- strand): ref base C (46/49); new base . (2/4); total (48/54) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.80e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.02e-01 | |||||||||||
Only 100 of 102 total aligned reads displayed.
CACCGGCCACCTGGGCGGCTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGTCACTGCGTCGCCTGTGGGGCCAAGACAAGTTCAGCTACAGCATCCGGGTCACCATTGCCCTC > NC_002947/5644498‑5644785 | cACCGGCCACCTGGGCGGCTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTTCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGccc < 1:1609157/150‑1 (MQ=255)cACCGGCCACCTGGGCGGCTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGccc < 1:1028317/150‑1 (MQ=255) aCCGGCCACCTGGGCGGCTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGcccc > 1:144162/1‑150 (MQ=255) cGGCCACCTGGGCGGCTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCaa > 1:669817/1‑150 (MQ=255) gCCACCTGGGCGGCTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATa > 1:771873/1‑150 (MQ=255) cACCTGGGCGGCTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAAc > 2:852116/1‑150 (MQ=255) aCCTGGGCGGCTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTCCGCGCCCTAATAAcc < 2:669817/150‑1 (MQ=255) tGGGCGGCTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCCGGTTATTGGGGCGCGCAGCG‑GCCCCAATAAcggc < 1:1913639/150‑4 (MQ=38) tGGGCGGCTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTCCTAGCCCGTGCTTGGCATC‑AGTATTGGGGC‑CGCTGCGCGCCCCACAAACCgcc > 2:834534/1‑148 (MQ=255) gcggcTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCt > 2:23206/1‑150 (MQ=255) gcggcTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCt > 1:1088251/1‑150 (MQ=255) gcTTCAACTTCCCGTGGGCTTGGGTATCGGGCAACGCCGCCGCGAAGTTCGTGTAGATTACAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGCCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCG‑CCCAATAACCGGCCCTGaaa < 2:714595/150‑1 (MQ=255) cTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGaaa < 1:601471/150‑1 (MQ=255) cTTCAACTTCCAGTGGGCTTGGGCACCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCGCGGAACGCTTCTTGCTGGCCAGTGCTTGGCGCC‑GCTATTGGGGC‑CGCTGCGCGCCCGAATAACCGGCCCTGaaa < 2:310128/150‑1 (MQ=255) ttCAACTTCCAGTGGGCTTGGGCATCAGAAAACGCCACAACGCACTTTGTGTAGAGTCGAATCCGTTCAGCAGGACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAg > 2:710441/1‑150 (MQ=255) tCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGc > 1:414346/1‑141 (MQ=255) tCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGc < 2:414346/141‑1 (MQ=255) cTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGccc > 2:1341830/1‑126 (MQ=255) cTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGccc < 1:1341830/126‑1 (MQ=255) ttCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTAttc > 1:1067921/1‑150 (MQ=255) cAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTAttcttc < 2:1358997/150‑1 (MQ=255) aGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATtcttct < 2:2823/150‑1 (MQ=255) tGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAAGGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGACCTTATTACTGTCCCTTAAAGGTATTCTTATgg > 2:841913/1‑149 (MQ=255) tGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACTGGCCCTGAAAGGTATTCTTCTGa > 1:875059/1‑150 (MQ=255) gggCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGAt < 2:436662/150‑1 (MQ=255) gCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCa > 1:686686/1‑150 (MQ=255) cTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCAc > 2:1387076/1‑150 (MQ=255) ttGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCAcc > 2:1561379/1‑150 (MQ=255) ttGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCAcc > 2:1438556/1‑150 (MQ=255) gCATCGGCTAACGCCGCCGCGCAGTTCGTGTAGAGTAAATTACTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCt < 2:803650/150‑1 (MQ=255) cATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTg > 2:315587/1‑150 (MQ=255) gCGAACGCCGCCGCGCAGTTCGTGTAGAGTGGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAgg < 2:83228/150‑1 (MQ=255) gCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAgg < 1:1561379/150‑1 (MQ=255) cgccgccgcGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCcatc < 1:841913/150‑1 (MQ=255) gccgccgcGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCcatca < 1:1460331/150‑1 (MQ=255) cgccgcGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGTAGGGCAGGCCATCATg < 2:1088251/150‑1 (MQ=255) ccgcGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTc < 1:1536545/150‑1 (MQ=255) gcgcAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGCGCGCAGCG‑GCCCCaa < 1:1764056/95‑1 (MQ=38) gcgcAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGCGCGCAGCG‑GCCCCaa > 2:1764056/1‑95 (MQ=38) ttCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCt > 1:268986/1‑150 (MQ=255) tCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTTCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCGGGCCATCATGTCATCGAGCTc < 1:811014/150‑1 (MQ=255) tgtAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGtt > 2:1463044/1‑150 (MQ=255) tgtAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGtt > 2:1463147/1‑150 (MQ=255) tgtAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGtt < 2:769540/150‑1 (MQ=255) gtagagtagaATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTc > 1:1673053/1‑150 (MQ=255) agagtagaATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGc > 1:1722313/1‑117 (MQ=255) agagtagaATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGc < 2:1722313/117‑1 (MQ=255) tcttccgaTCTTTTCAGCACCGCGGAACGCTTCTCGCTCGCCCCTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCgt < 2:845124/143‑1 (MQ=255) tagaATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCa > 1:1238775/1‑119 (MQ=255) tagaATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCa < 2:1238775/119‑1 (MQ=255) gaATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGGATTCTTCTGATCACCGCCTCGCAGGCCGTCATGTCATCGATCTCGTTCCgtaggtc > 1:716681/1‑145 (MQ=255) aTCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGTCAc > 1:1416122/1‑150 (MQ=255) cTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGTCACTGc < 2:686686/150‑1 (MQ=255) tttCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAg < 2:1768262/86‑1 (MQ=255) tttCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAg > 1:1768262/1‑86 (MQ=255) tttCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGTCACTGCg > 2:394607/1‑150 (MQ=255) tttCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGTCACTGCg > 2:1668725/1‑150 (MQ=255) tttCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGTCACTGCg > 2:746475/1‑150 (MQ=255) cagcaCGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATCGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGTCACTGCGTCGCCt > 2:878176/1‑150 (MQ=255) agcaCGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGTCACTGCGTCGCCtg < 1:1668725/150‑1 (MQ=255) agcaCGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGTCACTGCGTCGCCtg > 2:1796547/1‑150 (MQ=255) gcaCGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGGTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGTCACTGCGTCGCCtgt > 1:1413988/1‑150 (MQ=255) caCGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGTCACTGCGTCGCCtgtg > 2:1464814/1‑150 (MQ=255) caCGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGTCACTGCGTCGCCtgtg < 1:23206/150‑1 (MQ=255) ggAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGTCACTGCGTCGCCTGTgggg < 2:268986/150‑1 (MQ=255) gAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCgg < 1:1700495/64‑1 (MQ=255) gAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCgg > 2:1700495/1‑64 (MQ=255) actcttcttGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGTCACTGCGTCGCCTGTTGGGCCa > 2:486918/4‑150 (MQ=255) cGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGTCACTGCGTCGCCTGTGGGGCCaa < 1:394607/150‑1 (MQ=255) cttcttGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGTCACTGCGTCGCCTGTGGGGCCAAGa < 1:852116/150‑1 (MQ=255) ttGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGTCACTGCGTCGCCTGTGGGGCCAAGACAAg < 1:1438556/150‑1 (MQ=255) ttGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGTCACTGCGTCGCCTGTGGGGCCAAGACAAg < 1:1464814/150‑1 (MQ=255) tGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGTC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGTCACTGCGTCGCCTGTGGGGCCAAGACAAGt < 2:771873/150‑1 (MQ=255) cTGGCCCGTGCTTGGCGCC‑GTTATCGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGTCACTGCGTCGCCTGTGGGGCCAAGACAAGTTc < 1:878176/150‑1 (MQ=255) gCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGTCACTGCGTCGCCTGTGGGGCCAAGACAAGTTCAGc < 1:1796547/150‑1 (MQ=255) cccGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGTCACTGCGTCGCCTGTGGGGCCAAGACAAGTTCAGCt > 2:233662/1‑150 (MQ=255) ccGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATc < 1:800095/96‑1 (MQ=255) ccGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATc > 2:800095/1‑96 (MQ=255) ccGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGc < 2:1653462/100‑1 (MQ=255) ccGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGc > 1:1653462/1‑100 (MQ=255) cGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGTCACTGCGTCGCCTGTGGGGCCAAGACAAGTTCAGCTAc < 2:144162/150‑1 (MQ=255) gCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGTCACTGCGTCGCCTGTGGGGCCAAGACaa > 1:65816/1‑137 (MQ=255) gCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGTCACTGCGTCGCCTGTGGGGCCAAGACaa < 2:65816/137‑1 (MQ=255) gCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGTCACTGCGTCGCCTGTGGGGCCAAGACAAGTTCAGCTACAGc < 1:315587/150‑1 (MQ=255) tGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGTCACTGCGTCGCCTGTGGGGCCAAGACAAGTTCAGCTACAGCATc < 1:1387076/150‑1 (MQ=255) gcgcC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGTCACTGCGTCGCCTGTGGGGCCAAGACAAGTTCAGCTACAGCATCCg > 2:1651809/1‑150 (MQ=255) cgcC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGTCACTGCGTCGCCTGTGGGGCCAAGACAAGTTCAGCTACAGCATCCgg < 1:746475/150‑1 (MQ=255) cgcC‑GTTATTGGGGC‑CGCTCCGGGCCTCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGTCACTGCGTCGCCTGTGGGGCCAAGACAAGTTCAGCTACAGCATCCgg < 2:1413988/150‑1 (MQ=255) gccggTTATTGGGGCGCGCAGCG‑GCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGTCACTGCGTCGCCTGTGGGGCCAAGACAAGTTCAGCTACAGCATCCgg < 1:836799/146‑1 (MQ=255) c‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGTCACTGCGTCGCCTGTGGGGCCAAGACAAGTTCAGCTACAGCATCCGGGTc > 1:1548106/1‑150 (MQ=255) gTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGTCACTGCGTCGCCTGTGGGGCCAAGACAAGTTCAGCTACAGCATCCGGGTCa > 2:184066/1‑150 (MQ=255) ttATTGGGGCGCGCAGCG‑GCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGTCACTGCGTCGc > 2:1906635/1‑109 (MQ=38) ttATTGGGGCGCGCAGCG‑GCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGTCACTGCGTCGc < 1:1906635/109‑1 (MQ=38) ttATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGTCACTGCGTCGCCTGTGGGGCCAAGACAAGTTCAGCTACAGCATCCGGGTCAc < 1:702375/150‑1 (MQ=255) ttGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGTCACTGCGTCGCCTGTTGGGCCAAGACACGTTCAGCTACAGCATCCGGGTCACCAt > 2:1261021/1‑150 (MQ=255) ggC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGTCACTGCGTCGCCTGTGGGGCCAAGACAAGTTCAGCTACAGCATCCGGGTCACCATTGcc < 1:1651809/150‑1 (MQ=255) gC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGTCACTGCGTCGCCTGTGGGGCCAAGACAAGTTCAGCTACAGCATCCGGGTCACCATTGccc > 1:498291/1‑150 (MQ=255) c‑cGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGTCACTGCGTCGCCTGTGGGGCCAAGACAAGTTCAGCTACAGCATCCGGGTCACCATTGCCCt < 1:1463044/150‑1 (MQ=255) c‑cGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGTCACTGCGTCGCCTGTGGGGCCAAGACAAGTTCAGCTACAGCATCCGGGTCACCATTGCCCt < 1:1463147/150‑1 (MQ=255) cGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGTCACTGCGTCGCCTGTGGGGCCAAGACAAGTTCAGCTACAGCATCCGGGTCACCATTGCCCTc > 2:215823/1‑150 (MQ=255) | CACCGGCCACCTGGGCGGCTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCC‑GTTATTGGGGC‑CGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGTCACTGCGTCGCCTGTGGGGCCAAGACAAGTTCAGCTACAGCATCCGGGTCACCATTGCCCTC > NC_002947/5644498‑5644785 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |