Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,726,865 Δ1 bp 6.0% coding (157/2574 nt) opgH ← glucans biosynthesis glucosyltransferase H

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,726,8650C. 6.0% 262.3 / 10.7 83coding (157/2574 nt)opgHglucans biosynthesis glucosyltransferase H
Reads supporting (aligned to +/- strand):  ref base C (39/38);  new base . (3/2);  total (42/41)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.61e-01

CCATGGCTCGGGCACGACCTTGGTGCGTTTGATCGGCGGGGCGATCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCTCGTCGCTCAGTGGTAGGTGGGCCAGGTACTCGCCAAGCGATTCCGGCCTTGCGCTTGA  >  NC_002947/5726719‑5727012
                                                                                                                                                   |                                                                                                                                                   
ccATGGCTCGGGCACGACCTTGGTGCGTTTGATCGGCGGGGCGATCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGATCAGGCGCGGGCCCACCGAGGCCTGCACGGc                                                                                                                                                  <  2:738668/150‑1 (MQ=255)
   tGGCTCGGGCACGACCTTGGTGCGTTTGATCGGCGGGGCGATCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTc                                                                                                                                               <  2:1090330/150‑1 (MQ=255)
     gCTCGGGCACGACCTTGGTGCGTTTGATCGGCGGGGCGATCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCCGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCgg                                                                                                                                             >  1:21628/1‑150 (MQ=255)
     gCTCGGGCACGACCTTGGTGCGTTTGATCGGCGGGGCGATCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCgg                                                                                                                                             >  2:1248614/1‑150 (MQ=255)
     gCTCGGGCACGACCTTGGTGCGTTTGATCGGCGGGGCGATCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCgg                                                                                                                                             <  1:931576/150‑1 (MQ=255)
       tCGGGCACGACCTTGGTGCGTTTGATCGGCGGGGCGATCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCa                                                                                                                                           <  2:654995/150‑1 (MQ=255)
        cGGGCACGACCTTGGTGCGTTTGATCGGCGGGGCGATCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCGCCGAGGCCGTGCAGGCCTCggtgg                                                                                                                                          <  1:1354714/150‑4 (MQ=255)
         gggCACGACCTTGGTGCGTTTGATCGGCGGGGCGATCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCaga                                                                                                                                         <  1:1719828/150‑1 (MQ=255)
               gACCTTGGTGCGTTTGATCGGCGGGGCGATCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCAGAGCTggc                                                                                                                                   >  2:1024966/1‑150 (MQ=255)
                      gTGCGTTTGATCGGCGGGGCGATCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCggg                                                                                                                            >  2:406359/1‑150 (MQ=255)
                          gTTTGATCGGCGGGGCGATCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTgg                                                                                                                        >  2:324224/1‑150 (MQ=255)
                           tttGATCGGCGGGGCGATCTTCATGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGgc                                                                                                                       >  2:1267714/1‑150 (MQ=255)
                           tttGATCGGCGGGGCGATCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGgc                                                                                                                       >  2:1890143/1‑150 (MQ=255)
                           tttGATCGGCGGGGCGATCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGgc                                                                                                                       >  1:538742/1‑150 (MQ=255)
                               aTCGGCGGGGCGATCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGgccgcc                                                                                                                   >  2:1831045/1‑150 (MQ=255)
                                      gggCGATCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGtt                                                                                                            <  2:1216794/150‑1 (MQ=255)
                                       ggCGATCTTCATGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTg                                                                                                           <  1:1267714/150‑1 (MQ=255)
                                       ggCGATCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCACACCGAGGCCTTCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTg                                                                                                           >  1:1887219/1‑150 (MQ=255)
                                       ggCGATCTTCAGGCACAGGCGGCCGCTGCCGCCGACGCCGAACATTTCGTCTTCGTCCAGCTCGGCGGCGCTGCCCACGGACAGGCGCGCGCCCACCGAGACCTACACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTg                                                                                                           <  2:544282/150‑1 (MQ=255)
                                        gCGATCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTc                                                                                                                                               >  2:1000414/1‑113 (MQ=255)
                                        gCGATCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTc                                                                                                                                               <  1:1000414/113‑1 (MQ=255)
                                          gATCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCGGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGgtg                                                                                                        >  1:1185342/1‑150 (MQ=255)
                                           aTCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGgtgt                                                                                                       <  1:1890143/150‑1 (MQ=255)
                                            tCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTa                                                                                                      <  1:944530/150‑1 (MQ=255)
                                              ttCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGc                                                                                                    <  1:1363709/150‑1 (MQ=255)
                                              ttCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGc                                                                                                    >  2:1363709/1‑150 (MQ=255)
                                                   gCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCGGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACt                                                                                               <  2:1185342/150‑1 (MQ=255)
                                                     acaGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGa                                                                                             <  2:1344076/150‑1 (MQ=255)
                                                     acaGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGa                                                                                             <  1:1024966/150‑1 (MQ=255)
                                                                 tGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGgt                                                                                                         >  2:1307433/1‑126 (MQ=255)
                                                                 tGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGgt                                                                                                         <  1:1307433/126‑1 (MQ=255)
                                                                 tGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGc                                                                                 <  1:324224/150‑1 (MQ=255)
                                                                  gCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCt                                                                                <  2:1673470/150‑1 (MQ=255)
                                                                     gTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGc                                                                             >  1:1445047/1‑150 (MQ=255)
                                                                     gTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGc                                                                             <  2:78601/150‑1 (MQ=255)
                                                                       cGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGATGTGCAGCTGGCaa                                                                           <  2:1734318/150‑1 (MQ=255)
                                                                         aCGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGc                                                                         >  2:1252539/1‑150 (MQ=255)
                                                                                gCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGccc                                                                  <  2:1299179/150‑1 (MQ=255)
                                                                                 cATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCt                                                                                >  2:1864357/1‑135 (MQ=255)
                                                                                 cATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCt                                                                                <  1:1864357/135‑1 (MQ=255)
                                                                                    ttCGGCTTCTTCCAGCTGGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAg                                                                                        >  2:996312/1‑124 (MQ=255)
                                                                                    ttCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAg                                                                                        <  1:996312/124‑1 (MQ=255)
                                                                                    ttCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCCGGCAAGCTCAGCCCgctg                                                              >  1:1236048/1‑150 (MQ=255)
                                                                                     tCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCgctgc                                                             <  2:1409804/150‑1 (MQ=255)
                                                                                             ttcCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACt                                                                                               >  2:1837546/1‑108 (MQ=255)
                                                                                             ttcCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACt                                                                                               <  1:1837546/108‑1 (MQ=255)
                                                                                             ttcCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCTCGTCGCt                                                     >  2:1369429/1‑150 (MQ=255)
                                                                                             atcCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTTAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCTCGTCGCt                                                     >  2:1327461/2‑150 (MQ=255)
                                                                                               ccAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCTCGTCGCTCa                                                   >  2:327210/1‑150 (MQ=255)
                                                                                                cAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCTCGTCGCTCAg                                                  >  1:478945/1‑150 (MQ=255)
                                                                                                   cTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGCACAGTAGCTGGCAAGCTCAGCCCGCTGCTCGTCGCGGAGTgg                                               >  1:1476603/1‑150 (MQ=255)
                                                                                                   cTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCTCGTCGCTCAGTgg                                               <  1:1518401/150‑1 (MQ=255)
                                                                                                    tCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCTCGTCGCTCAGTGGt                                              >  2:1593956/1‑150 (MQ=255)
                                                                                                    tCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCCCGTCGCTCAGTGGt                                              >  1:881654/1‑150 (MQ=255)
                                                                                                        cggcgCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTgg                                                                                                                        >  2:1758838/1‑72 (MQ=255)
                                                                                                        cggcgCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTgg                                                                                                                        <  1:1758838/72‑1 (MQ=255)
                                                                                                            gcTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCTCGTCGCTCAGTGGTAGGTGGGc                                      >  2:365190/1‑150 (MQ=255)
                                                                                                            gcTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCTCGTCGCTCAGTGGTAGGTGGGc                                      >  1:177596/1‑150 (MQ=255)
                                                                                                             cTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCTCGTCGCTCAGTGGTAGGTGGGcc                                     <  2:1445047/150‑1 (MQ=255)
                                                                                                              tGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCTCGTCGCTCAGTGGTAGGTGGGCCa                                    >  2:546137/1‑150 (MQ=255)
                                                                                                                  cACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCa                                                                                                                                           <  1:925296/43‑1 (MQ=255)
                                                                                                                  cACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCa                                                                                                                                           >  2:925296/1‑43 (MQ=255)
                                                                                                                   aCGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCTCGTCGCTCAGTGGTAGGTGGGCCAGGTAc                               <  2:1377570/150‑1 (MQ=255)
                                                                                                                   aCGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCTCGTCGCTCAGTGGTAGGTGGGCCAGGTAc                               <  1:1369429/150‑1 (MQ=255)
                                                                                                                        aaGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCTCGTCGCTCAGTGGTAGGTGGGCCAGGTACTCGcc                          <  1:1145418/149‑1 (MQ=255)
                                                                                                                           gcgcGGGCCCACCGCGGCCTGCAAGGCATCGGCCGGGCTGGCGGCCGCACTGTCCTCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCTCGTCGCTCAGTGGTAGGTGGGCCAGGTACTCGCCGAg                       <  2:1476603/150‑1 (MQ=255)
                                                                                                                               agctctgccGAGGCCGTGCAGGCCTCGGTAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGATGCTCGTCGCTCAGTGGTAGGTGGGCCAGGTACTCGCCAAGCGAt                   >  1:900968/8‑150 (MQ=255)
                                                                                                                                 gCCCACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCTCGTCGCTCAGTGGTAGGTGGGCCAGGTACTc                             >  1:1073520/1‑138 (MQ=255)
                                                                                                                                 gCCCACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCTCGTCGCTCAGTGGTAGGTGGGCCAGGTACTc                             <  2:1073520/138‑1 (MQ=255)
                                                                                                                                   ctgccGAGGCCGTGCAGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCTCGTCGCTCAGTGGTAGGTGGGCCAGGTACTCGCCAAGCGATTCCg               >  1:1302320/4‑150 (MQ=255)
                                                                                                                                   ccACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCTCGTCGCTCAGTGGTAGGTGGGCCAGGTACTCGCCAAGCGATTCCg               >  1:1396015/1‑150 (MQ=255)
                                                                                                                                   ccACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCTCGTCGCTCAGTGGTAGGTGGGCCAGGTACTCGCCAAGCGATTCCg               >  2:304942/1‑150 (MQ=255)
                                                                                                                                   ccACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCGCGTCGCTCAGTGGTAGGTGGGCCAGGTACTCGCCAAGCGATTCCg               >  1:437107/1‑150 (MQ=255)
                                                                                                                                    tgccGAGGCCGTGCAGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGa                                                                                         <  1:548977/73‑1 (MQ=38)
                                                                                                                                    tgccGAGGCCGTGCAGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGa                                                                                         >  2:548977/3‑75 (MQ=38)
                                                                                                                                      ccGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCTCGTCGCTCAGTGGTAGGTGGGCCAGGTACTCGCCAAGCGATTCCGGcc            <  1:1593956/150‑1 (MQ=255)
                                                                                                                                       cGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCCGGCAAGCTCAGCCCGCTGCTCGTCGCTCAGTGGTAGGTGGGCCAGGTACTCGCCAAGCGATTCCGGCCt           <  2:1236048/150‑1 (MQ=255)
                                                                                                                                        gAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCTCGTCGCTCAGTGGTAGGTGGGCCAGGTACTCGCCAAGCGATTCCGGCCtt          <  2:21628/150‑1 (MQ=255)
                                                                                                                                                gCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCGAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCTCGTCGCTCAGTGGTAGGTGGGCCAGGTACTCGCCAAGCGATTCCGGCCTTGCGCTTg   >  1:1078224/1‑150 (MQ=255)
                                                                                                                                                 cACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCTCGTCGCTCAGTGGTAGGTGGGCCAGGTACTCGCCAAGc                      <  1:130986/130‑1 (MQ=255)
                                                                                                                                                 cACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCTCGTCGCTCAGTGGTAGGTGGGCCAGGTACTCGCCAAGc                      >  2:130986/1‑130 (MQ=255)
                                                                                                                                                 cACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCTCGTCGCTCAGTGGTAGGTGGGCCAGGTACTCGCCAAGCGATTCCGGCCTTGCGCTTGa  >  1:1133664/1‑150 (MQ=255)
                                                                                                                                                 cACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCTCGTCGCTCAGTGGTAGGTGGGCCAGGTACTCGCCAAGCGATTCCGGCCTTGCGCTTGa  <  1:1831045/150‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
CCATGGCTCGGGCACGACCTTGGTGCGTTTGATCGGCGGGGCGATCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCTGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCTCGTCGCTCAGTGGTAGGTGGGCCAGGTACTCGCCAAGCGATTCCGGCCTTGCGCTTGA  >  NC_002947/5726719‑5727012

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: