Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,057,001:1 +A 10.4% coding (390/990 nt) PP_2669 ← outer membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,057,0011.A10.4% 274.7 / 28.0 77coding (390/990 nt)PP_2669outer membrane protein
Reads supporting (aligned to +/- strand):  ref base . (39/30);  new base A (4/4);  total (43/34)
Fisher's exact test for biased strand distribution p-value = 7.26e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.84e-01

TCGGCCAGGGTCTGGGTGCTGGTGTCGATCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGT‑CCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACTCCTTGATGATCTTGCGGGTGGCCACGTCCATCACCTGCACCCGGTCC  >  NC_002947/3056852‑3057148
                                                                                                                                                      |                                                                                                                                                    
tCGGCCAGGGTCTGGGTGCTGGTGTCGATCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGgtg                                                                                                                                                       <  1:816318/150‑1 (MQ=255)
 cGGCCAGGGTCTGGGTGCTGGTGTCGATCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACGGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGgtg‑t                                                                                                                                                     <  2:1663135/150‑1 (MQ=255)
 cGGCCAGGGTCTGGGTGCTGGTGTCGATCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGgtg‑t                                                                                                                                                     <  2:424846/150‑1 (MQ=255)
 cGGCCAGGGTCTGGGTGCTGGTGTCGATCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGACGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGgtg‑t                                                                                                                                                     <  1:693485/150‑1 (MQ=255)
 cGGCCAGGGTCTGGGTGCTGGTGTCGATCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGACGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGgtg‑t                                                                                                                                                     <  2:334564/150‑1 (MQ=255)
  ggCCAGGGTCTGGGTGCTGGTGTCGATCCAGTGCAGCATGTTGCTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACATTGTCGGTGACGGTG‑Tc                                                                                                                                                    >  1:1395478/1‑150 (MQ=255)
   gCCAGGGTCTGGGTGCTGGTGTCGATCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGgtgatc                                                                                                                                                    >  1:1828251/1‑147 (MQ=255)
    ccAGGGTCTGGGTGCTGGTGTCGATCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGa                                                                                                                                                  >  1:758548/1‑150 (MQ=255)
          tCTGGGTGCTGGTGTCGATCCAGTGCAGCATGTTGGTGGTTTCGCTAGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCg                                                                                                                                            >  1:1720354/1‑150 (MQ=255)
            tGGGTGCTGGTGTCGATCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTGATCGA‑CACCGTc                                                                                                                                          <  1:1225942/150‑1 (MQ=255)
            tGGGTGCTGGTGTCGATCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTc                                                                                                                                          >  2:686225/1‑150 (MQ=255)
             gggTGCTGGTGTCGATCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCa                                                                                                                                         <  1:783862/150‑1 (MQ=255)
                 gCTGGTGTCGATCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCTCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAg                                                                                                                                     <  2:274356/150‑1 (MQ=255)
                    ggTGTCGATCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAgcgc                                                                                                                                  <  1:686225/150‑1 (MQ=255)
                     gtgtCGATCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTGATCGA‑CACCGTCAccgacaag                                                                                                                                 <  2:1828251/150‑7 (MQ=255)
                     gtgtCGATCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCa                                                                                                                                         >  2:956752/1‑142 (MQ=255)
                     gtgtCGATCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCa                                                                                                                                         <  1:956752/142‑1 (MQ=255)
                       gtCGATCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATc                                                                                                                               <  1:375975/150‑1 (MQ=255)
                          gATCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGGCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGT‑c                                                                                                                           <  2:550385/150‑1 (MQ=255)
                          gATCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAg                                                                                                                                     <  1:1638709/141‑1 (MQ=255)
                          gATCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAg                                                                                                                                     >  2:1638709/1‑141 (MQ=255)
                            tCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGT‑CCt                                                                                                                         >  1:638461/1‑150 (MQ=255)
                                gTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGT‑CCTCGtt                                                                                                                     <  2:620510/150‑1 (MQ=255)
                                 tGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGT‑CCTCGttt                                                                                                                    >  2:833489/1‑150 (MQ=255)
                                      caTGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGT‑CCTCGTTTGatac                                                                                                               >  1:1762100/1‑150 (MQ=255)
                                      caTGTTGGTGGTTTCGCTAGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGT‑CCTCGTTTGatac                                                                                                               <  2:1720354/150‑1 (MQ=255)
                                                     gCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGT‑CCTCGTTTGATACATACAGCCAGCGGTc                                                                                                >  2:269837/1‑150 (MQ=255)
                                                     gCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGT‑CCTCGTTTGATACATACAGCCAGCGGTc                                                                                                >  1:1726685/1‑150 (MQ=255)
                                                     gCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACCTCGATTTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGT‑CCTCGTTTGATACATACAGCCAGCGGTc                                                                                                >  2:1617028/1‑150 (MQ=255)
                                                      cTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGT‑CCTCGTTTGATACATACAGCCAGCGGTCg                                                                                               >  1:1926032/1‑150 (MQ=255)
                                                       tGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑CCGATCACCGTCACCAGCGCATCGT‑CCTCGTTTGATACATACAGCCAGCGGTCGt                                                                                              >  1:1316214/1‑150 (MQ=255)
                                                         gtgtTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGT‑CCTCGTTTGATACATACAGCCAGCGGTCGTTg                                                                                            >  2:674554/1‑150 (MQ=255)
                                                          tgtTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGT‑CCTCTTTTGATACATACAGCCAGCGGTCGTTgg                                                                                           <  2:638461/150‑1 (MQ=255)
                                                          tgtTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGT‑CCTCGttt                                                                                                                    >  2:771587/1‑125 (MQ=255)
                                                          tgtTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGT‑CCTCGttt                                                                                                                    <  1:771587/125‑1 (MQ=255)
                                                           gtTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGT‑CCTCGTTTGATACATACAGCCAGCGGTCGTTggg                                                                                          <  2:208280/150‑1 (MQ=255)
                                                            ttGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTGATCGA‑CACCGTCAcc                                                                                                                                       <  2:1499659/105‑1 (MQ=255)
                                                            ttGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTGATCGA‑CACCGTCAcc                                                                                                                                       >  1:1499659/1‑105 (MQ=255)
                                                                 cGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGT‑CCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAg                                                                                    >  1:192134/1‑150 (MQ=255)
                                                                 cGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGT‑CCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAg                                                                                    >  2:1682039/1‑150 (MQ=255)
                                                                  gCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGT‑CCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAgg                                                                                   >  1:334712/1‑150 (MQ=255)
                                                                   cccACTTGCCGTCGGGGCTGACCGCCATGCCTTGGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGT‑CCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAggg                                                                                  >  2:178312/1‑150 (MQ=255)
                                                                    ccACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTGATCGA‑CACCGTCAcc                                                                                                                                       >  1:454010/1‑97 (MQ=39)
                                                                    ccACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTGATCGA‑CACCGTCAcc                                                                                                                                       <  2:454010/97‑1 (MQ=39)
                                                                    ccACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTAAACCACACATCGTAACTCCAGT‑AAACATACAGCCAGCGGTCGTTGGGGTGCAGGGc                                                                                 >  1:1398862/1‑150 (MQ=255)
                                                                     cACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGT‑CCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCg                                                                                >  2:706996/1‑150 (MQ=255)
                                                                       cTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGTTTCGT‑CCTCGTTTGATACATACAGCCAGTGGTCGTTGGGGTGCAGGGCGaa                                                                              <  2:758548/150‑1 (MQ=255)
                                                                             gTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGT‑CCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTc                                                                        >  1:504836/1‑150 (MQ=255)
                                                                               cGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGT‑CCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCgg                                                                      <  1:716653/150‑1 (MQ=255)
                                                                                ggggCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGT‑CCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCggg                                                                     <  2:1267202/150‑1 (MQ=255)
                                                                                ggggCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGT‑CCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCggg                                                                     <  1:257599/150‑1 (MQ=255)
                                                                                ggggCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGT‑CCTCGTTTGATACATACAGCCAGAGGAAGTTGGGGTGACGGGCGAACAGCttcgg                                                                     >  2:900677/1‑146 (MQ=255)
                                                                                 gggCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑CCGATCACCGTCACCAGCGCATCGT‑CCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCgggg                                                                    <  2:1316214/150‑1 (MQ=255)
                                                                                         cGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGT‑CCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGcc                                                            >  2:1620893/1‑150 (MQ=255)
                                                                                         cGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGT‑CCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGcc                                                            >  2:1110371/1‑150 (MQ=255)
                                                                                          gCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACGAGCGCATCGT‑CCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCg                                                           >  1:1401382/1‑150 (MQ=255)
                                                                                                  ttCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGT‑CCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCaa                                                   >  2:820853/1‑150 (MQ=255)
                                                                                                        ttCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGT‑CCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACTCCtt                                             <  1:674554/150‑1 (MQ=255)
                                                                                                             tGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGT‑CCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAgg                                                      <  2:1642780/136‑1 (MQ=255)
                                                                                                             tGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGT‑CCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAgg                                                      >  1:1642780/1‑136 (MQ=255)
                                                                                                                cGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGT‑CCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACTCCTTGATGATCt                                     >  1:379037/1‑150 (MQ=255)
                                                                                                                  aCTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGT‑CCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACTCCTTGCTGATCttt                                   >  2:862518/1‑149 (MQ=255)
                                                                                                                       gATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGT‑CCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACTCCTTGATGATCTTGCGGGt                              <  2:1395478/150‑1 (MQ=255)
                                                                                                                       gATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGT‑CCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACTCCTTGATGATCTTGCGGGt                              <  1:820853/150‑1 (MQ=255)
                                                                                                                        aTCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGT‑CCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACTCCTTGATGATCTTGCGGGTg                             >  2:1497611/1‑150 (MQ=255)
                                                                                                                         tCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGT‑CCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGAAGGGCGAACTGCTCGGGGTACTTGCCGGAAGGCAACTCCTTGATGATCTTGCGGGTgg                            >  2:1852323/1‑150 (MQ=255)
                                                                                                                               cGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGT‑CCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACTCCTTGATGATCTTGCGGGTGGCCACGt                      >  1:1588342/1‑150 (MQ=255)
                                                                                                                                 aGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGT‑CCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACTCCTTGATGATCTTGCGGGTGGCCACGTcc                    <  1:706996/150‑1 (MQ=255)
                                                                                                                                   cACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGT‑CCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACTCCTTGATGATCTTGCGGGTGGCCACGTCCAt                  <  2:192134/150‑1 (MQ=255)
                                                                                                                                     ccTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGT‑CCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACTCCTTGATGATCTTGCGGGGGGCCACGTCCATCa                >  2:740001/1‑150 (MQ=255)
                                                                                                                                      tgcgctggTGACGGTGATCGA‑CACCGTCACCGGCGCATCGT‑CCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACTCCTTGATGATCTTGCGGGTGGCCACGTCCATCAc               >  2:749854/7‑150 (MQ=255)
                                                                                                                                       ttGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGT‑CCTCGttt                                                                                                                    <  2:1562777/48‑1 (MQ=255)
                                                                                                                                       ttGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGT‑CCTCGttt                                                                                                                    >  1:1562777/1‑48 (MQ=255)
                                                                                                                                       ttGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGT‑CCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACTCCTtga                                           <  1:1315406/121‑1 (MQ=255)
                                                                                                                                       ttGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGT‑CCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACTCCTtga                                           >  2:1315406/1‑121 (MQ=255)
                                                                                                                                           cGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGT‑CCTCGTTTCATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACTCCTTGATGATCTTGCGGGTGGCCACGTCCATCACCTGCa          <  2:1398862/150‑1 (MQ=255)
                                                                                                                                            ggTGACGGTGATCGA‑CACCGTCACCAGCGCATCGT‑CCTCGTTTGATACATACAGCCAGAGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACTCCTTGATGATCTTGCGGGTGGCCACGTCCATCACCTGCAc         >  1:1053507/1‑150 (MQ=255)
                                                                                                                                             gTGACGGTG‑TCGATCACCGTCACCAGCGCATCGT‑CCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACTCCTTGATGATCTTGCGGGTGGCCACGTCCATCACCTGCAcc        >  2:592865/1‑150 (MQ=255)
                                                                                                                                              ggACGGTG‑TCGATCACCGTCACCAGCGCATCGT‑CCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACTCCTTGATGATCTTGCGGGTGGCCACGTCCATCACCTGCAccc       <  2:334712/149‑1 (MQ=255)
                                                                                                                                                aCGGCG‑TAGCTCAACGTCACCAACGCATCGG‑TCTCGTTTGATACATACAGCCAGCGGTCGTTGGTGGGCATGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACTCCTTGATGATCTTGCGGGTGGCCACGTCCATCACCTGCACCCgg     <  1:1490789/150‑1 (MQ=255)
                                                                                                                                                 cGGTG‑TCGATCACCGTCACCAGCGCATCGT‑CCTCGTTTGATACCTACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACTCCTTGATGATCTTGCGGGTGGCCACGTCCATCACCTGCACCCGGt    <  2:1514203/150‑1 (MQ=255)
                                                                                                                                                  ggTG‑TCGATCACCGTCACCAGCGCATCGT‑CCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACTCCTTGATGATCTTGc                                  <  1:505761/119‑1 (MQ=255)
                                                                                                                                                  ggTG‑TCGATCACCGTCACCAGCGCATCGT‑CCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACTCCTTGATGATCTTGc                                  >  2:505761/1‑119 (MQ=255)
                                                                                                                                                   gtg‑tCGATCACCGTCACCAGCGCATCGT‑CCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAgg                                                      <  2:1085503/98‑1 (MQ=255)
                                                                                                                                                   gtg‑tCGATCACCGTCACCAGCGCATCGT‑CCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAgg                                                      >  1:1085503/1‑98 (MQ=255)
                                                                                                                                                   gtg‑tCGATCACCGTCACCAGCGCATCGT‑CCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACTCCTTGATGATCTTGCGGGTGGCCACGTCCATCACCTGCACCCGGTcc  <  1:1617028/150‑1 (MQ=255)
                                                                                                                                                   gtg‑tCGATCACCGTCACCAGCGCATCGT‑CCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACTCCTTGATGATCTTGCGGGTGGCCACGTCCATCACCTGCACCCGGTcc  <  1:1682039/150‑1 (MQ=255)
                                                                                                                                                      |                                                                                                                                                    
TCGGCCAGGGTCTGGGTGCTGGTGTCGATCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGT‑CCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACTCCTTGATGATCTTGCGGGTGGCCACGTCCATCACCTGCACCCGGTCC  >  NC_002947/3056852‑3057148

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑