| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,725,088:1 | +C | 5.1% | intergenic (+27/+41) | PP_5661 → / ← PP_4183 | putative lipoprotein/membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,725,088 | 1 | . | C | 5.1% | 334.6 / 10.7 | 78 | intergenic (+27/+41) | PP_5661/PP_4183 | putative lipoprotein/membrane protein |
| Reads supporting (aligned to +/- strand): ref base . (36/38); new base C (2/2); total (38/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.32e-01 | |||||||||||
GAAGCCGCCGAGGAAAACGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGAATGGAACTCTCGACGGTA > NC_002947/4724939‑4725233 | gAAGCCGCCGAGGAAAACGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAt > 2:1598030/1‑150 (MQ=255)gAAGCCGCCGAGGAAAACGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTAAAACGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAt < 1:1806442/150‑1 (MQ=255) cggccgAGGAAAACGCCGAAGATGCCAAAGATCAGGCCAAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACGACGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCg < 2:160247/148‑1 (MQ=255) cgccgAGGAAAACGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCgg < 1:467338/150‑1 (MQ=255) gAGGAAAACGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGttt > 1:1337160/1‑150 (MQ=255) gAAAACGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGtttttt > 1:1912937/1‑150 (MQ=255) gAAAACGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGAC‑ATCGTCGGGtttttt < 1:1396500/150‑1 (MQ=255) aaaaCGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGttttttt < 1:450199/150‑1 (MQ=255) aaaaCGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGttttttt < 2:1912937/150‑1 (MQ=255) aaaaCGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGttttttt < 1:1100279/150‑1 (MQ=255) aaaCGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGTTTTTTtg < 2:231344/150‑1 (MQ=255) aCGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGTTTTTTtgtg > 2:1499632/1‑150 (MQ=255) cTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGTTTTTTTGTGCCTGCGAAc < 2:1312348/150‑1 (MQ=255) cAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGTTTTTTTGTGCCTGCGAACTTTc > 1:1515505/1‑150 (MQ=255) aaaGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGttttttt < 2:1099390/133‑1 (MQ=255) aaaGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGttttttt > 1:1099390/1‑133 (MQ=255) aTCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTa > 2:1528969/1‑150 (MQ=255) cAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCCCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAAt < 2:1323440/150‑1 (MQ=255) gCCGAAGCCGAGCAGAAGGCTGCCGAAGGAGCCGTTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGt < 2:413541/150‑1 (MQ=255) cGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGttt < 1:1330982/150‑1 (MQ=255) aaGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCa > 1:1062929/1‑150 (MQ=255) gCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGt < 1:1285231/150‑1 (MQ=255) gAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTgg > 2:1806422/1‑150 (MQ=255) gAGCAGAAGGCTGCCGAAAAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAATAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGG‑TTTTTTGTGCCTGCGAACTTTCGa > 1:1197427/1‑132 (MQ=255) gAGCAGAAGGCTGCCGAAAAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAATAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGG‑TTTTTTGTGCCTGCGAACTTTCGa < 2:1197427/132‑1 (MQ=255) aaGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAaacaa < 2:1496417/150‑1 (MQ=255) ggCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAAcc < 2:1062929/150‑1 (MQ=255) ggCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCCCCCATCACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAAcc < 1:101575/150‑1 (MQ=255) tGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGa > 2:557749/1‑149 (MQ=255) tGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGa < 1:557749/149‑1 (MQ=255) tGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAg < 2:1337160/150‑1 (MQ=255) tGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAg > 1:699555/1‑150 (MQ=255) gCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAAAAAAAAACCCGACGAT‑GTCGGGAATCTTCGGTCGACCGGATTGGCTGTGAATCGTTTCAGTTGGAAACAACCGAGc > 1:1399100/1‑150 (MQ=255) gaagaaGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCttt < 1:1621189/150‑1 (MQ=255) gaagaaGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGAC‑ATCGTCGGGTTTTTTtgttt > 2:972488/1‑102 (MQ=38) gaagaaGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGAC‑ATCGTCGGGTTTTTTtgttt < 1:972488/104‑3 (MQ=38) aagCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCtt < 1:1170389/150‑1 (MQ=255) agCCGCTCCGGCTACTCCGGCTCCTACTAAACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTg > 2:583009/1‑150 (MQ=255) gccgccCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCg > 1:1230472/1‑85 (MQ=255) gccgccCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCg < 2:1230472/85‑1 (MQ=255) cGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGtt < 2:1559828/125‑1 (MQ=255) cGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGtt > 1:1559828/1‑125 (MQ=255) cGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGcc < 2:1515505/150‑1 (MQ=255) cTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACAGAGCTTTCCTTGGCCgg > 2:1109241/1‑150 (MQ=255) cTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGa < 2:1777826/150‑1 (MQ=255) gcTCCGGGTGCTACTACACCGGCAGAACCTGCGAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACa < 2:1535031/149‑1 (MQ=255) aCTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGTCCGGCTCCGACa < 2:699555/150‑1 (MQ=255) tCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGt < 1:1598030/150‑1 (MQ=255) cGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTac > 2:762668/1‑150 (MQ=255) cGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTac > 1:1430242/1‑150 (MQ=255) ctactaCACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTtc < 1:762668/150‑1 (MQ=255) ctacACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTtcggt > 1:370797/1‑150 (MQ=255) tacACCGCCGGAACCTCCCCCGGAGTACTTGGCTAAGACAAAAAGAGCCTGCGGG‑GTCTGGATGTTTTTTGCCTGCGTACGTCCGATTAATCGTTTCAGTTGTAAACAACCGAGCTTTACTTGGCAGGCCCCGGCACTACTCTTtcgctc > 2:1801681/1‑150 (MQ=255) acacCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTtcggtcg > 1:1550365/1‑150 (MQ=255) acCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTcggtcggt > 1:1589005/1‑150 (MQ=255) acCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTcggtcggt > 2:1730535/1‑150 (MQ=255) ccGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGgtg > 1:250071/1‑150 (MQ=255) cGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGgtgt > 2:1409066/1‑150 (MQ=255) ggCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGTTTTTTTGTGCCTGCGAACTTTCAATTAATCGTTTCAGTTGGAAACAACCGAGCATTCCTTGGCTGGCTCCGACAGTACACTTTCGGTCGGtgtg < 1:1499632/150‑1 (MQ=255) gCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGTTTTTCTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTcggtcggt < 2:1102917/146‑1 (MQ=255) gCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGTTTTTCTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTcggtcggt > 1:1102917/1‑146 (MQ=255) aaCCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAacac > 2:1907068/1‑150 (MQ=255) ccTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGATGTGatggtgt < 1:1109241/150‑7 (MQ=255) cTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGTTTTTTTGTGCCTGCAAACTATCGATTAATCGTTTCAGTAGGAAACAACCGTGCGTGTCGTGGTCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCAt > 2:707647/1‑150 (MQ=255) cAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATcaca > 1:1254100/1‑150 (MQ=255) aaGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACAt > 2:1623802/1‑150 (MQ=255) cAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGa < 1:1222288/150‑1 (MQ=255) aGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAg < 2:1589005/150‑1 (MQ=255) ttGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTCGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACAt < 2:1254100/150‑1 (MQ=255) gCTAAAACAAAAAAACCCGACGAT‑GTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCg > 2:1649777/1‑150 (MQ=255) tAAAACAAAAAAACCCGACGAT‑GTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGaa < 1:216247/150‑1 (MQ=255) aaaaaaCCCGACGAT‑GTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGAATGGAAct > 1:753673/1‑150 (MQ=255) aaaaaCCCGACGAT‑GTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGAATGGAActc > 2:1630260/1‑150 (MQ=255) aaaaaCCCGACATC‑GTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGa < 1:127357/131‑1 (MQ=255) aaaaaCCCGAC‑ATCGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGa > 2:127357/1‑131 (MQ=255) aaaaCCCGACGAT‑GTCGGGTTTTTTTGTGCCTGCGAACTTTCGGTTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGAATGGAActct > 1:1559945/1‑150 (MQ=255) aaaaCCCGACATC‑GTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGAATGGAActct > 2:69535/1‑150 (MQ=255) aaaCCCGACGAT‑GTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGAATGGAACtctc < 2:1314313/150‑1 (MQ=255) ccGACGAT‑GTCGGGTTTTTTTTTTCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGAATGGAACTCTCGACg > 2:1504041/1‑150 (MQ=255) acgaT‑GTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCTTTTCATGTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGAATGGAACTCTCGACGGTa < 1:916509/150‑1 (MQ=255) | GAAGCCGCCGAGGAAAACGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGAT‑GTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGAATGGAACTCTCGACGGTA > NC_002947/4724939‑4725233 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |