New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 61917	79 (1.080)	4 (0.060)	4/238	NT	5.3%	coding (162/1269 nt)	PP_0053	sulfide:quinone oxidoreductase
	?	NC_002947	= 61932	68 (0.970)					coding (177/1269 nt)	PP_0053	sulfide:quinone oxidoreductase

CGCGACCCATCGTTGGACGTCGCCTTGATCGACCCTGCCGAAGTGCACTACTACCAACCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/61855‑61917 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcACCGACCATGGTC‑CAGCCGGGTTGGTAGTAGTGCACTTCGGCAGGGTCGATCAAGGCGACGTCCAACGATGGGTCGCGGCTGATCAGGCTGGAAGCAGTGGCGATTCCGGC  <  NC_002947/61932‑61822                                                                                                                                                                                 CGCGACCCATCGTTGGACGTCGCCTTGATCGACCCTGCCGAAGTGCACTACTACCAACCCGGCACCGACCATGGTC‑CAGCCGGG                                                                                            <  1:3889/84‑1 CGCGACCCATCGTTGGACGTCGCCTTGATCGACCCTGCCGAAGTGCACTACTACCAACCCGGCACCGACCATGGTC‑CAGCCGGG                                                                                            >  2:3889/1‑84                                                 TACTACCAACCCGGC‑TGGACCATGGTCGGTGCCGGGTTGGTAGTAGTGCACTTCGGCAGGGTCGATCAAGGCGACGTCCAACGATGGGTCGCGGCTGATCAGGCTGGAAGCAGTGGCGATTCCGGC  <  1:1830611/126‑1                                                 TACTACCAACCCGGC‑TGGACCATGGTCGGTGCCGGGTTGGTAGTAGTGCACTTCGGCAGGGTCGATCAAGGCGACGTCCAACGATGGGTCGCGGCTGATCAGGCTGGAAGCAGTGGCGATTCCGGC  >  2:1830611/1‑126                                                                                                                                                                                 CGCGACCCATCGTTGGACGTCGCCTTGATCGACCCTGCCGAAGTGCACTACTACCAACCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/61855‑61917 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcACCGACCATGGTC‑CAGCCGGGTTGGTAGTAGTGCACTTCGGCAGGGTCGATCAAGGCGACGTCCAACGATGGGTCGCGGCTGATCAGGCTGGAAGCAGTGGCGATTCCGGC  <  NC_002947/61932‑61822

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.