| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 92327 = | 66 (0.900) | 4 (0.060) | 4/234 | NT | 5.9% | coding (53/810 nt) | trpA | tryptophan synthase subunit alpha |
| ? | NC_002947 | 92356 = | 66 (0.960) | coding (24/810 nt) | trpA | tryptophan synthase subunit alpha | |||||
CGAAGCTGCCCAAGGACCACCTGATGGTCGTGTGCCTGTCGGGCCGCGGCGACAAAGATATGCAAACCGTCATGAACCACATGGCCGCCCAGGAGAAACAGGCATGAGCCGTCTTGAACAACGCTTCGCCGAGCTGAAGGCCGAAGGCCGCTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/92482‑92327‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctcggcGAAGCGTTGTTCAAGACGGCTCATGCCTGTTTCTCCTGGGCGGCCATGTGGTTCATGACGGTTTGCATATCTTTGTCGCCGCGGCCCGACAGGCACACGACCATCAGGTGGTCCTTGGGCAGCTTCGGTGCGCGCTTGATCGCTTCGG > NC_002947/92356‑92503 CGAAGCTGCCCAAGGACCACCTGATGGTCGTGTGCCTGTCGGGCCGCGGCGACAAAGATATGCAAACCGTCATGAACCACATGGCCGCCCAGGAGAAACAGGCATGAGCCGTCTTGAACAACGCTTCGCCGAGCTGAAGGCCGAAGGCCG > 1:1607821/1‑150 AGCTGCCCAAGGACCACCTGCTGGTAGTGTGACCGTGCGGCCTCGGCGACAAAGATATGCAAACCGTCATGAACGACATGGTCGCCTAGGAGAAACAGGCATGAGCCGTCTTGAACAACGCTTCGCCGAGCTGAAGGCCGAAGGCCGCTC < 1:619218/150‑1 AGCTGCCCAAGGACCACCTGATGGTCGTGTGCCTGTCGGGCCGCGGCGACAAAGATATGCAAACCGTCATGAACCACATGGCCGCCCAGGAGAAACAGGCATGAGCCGTCTTGAACAACGCTTCGCCGAGCTGAAGGCCGAAGGCCGCTC < 2:1607821/150‑1 GCTGCCCAAGGACCACCTGATGGTCGTGTGCCTGTCGGGCCGCGGCGACAAAGATATGCAAACCGTCATGAACCACATGGCCGCCCAGGAGAAACAGGCATGAGCCGTCTTGAACAACGCTTCGCCGAGCTGAAGGCCGAAGGCCGCTCG > 2:434642/1‑150 CGTCTTGAACAACGCTTCGCCGAGCTGAAGGCCGAAGGCCGCTCGGCGAAGCGTTGTTCAAGACGGCTCATGCCTGTTTCTCCTGGGCGGCCATGTGGTTCATGACGGTTTGCATATCTTT < 1:1195246/121‑1 CGTCTTGAACAACGCTTCGCCGAGCTGAAGGCCGAAGGCCGCTCGGCGAAGCGTTGTTCAAGACGGCTCATGCCTGTTTCTCCTGGGCGGCCATGTGGTTCATGACGGTTTGCATATCTTT > 2:1195246/1‑121 TTCGCCGAGCTGAAGGCCGAAGGCCGCTCGGCGAAGCGTTGTTCAAGACGGCTCATGCCTGTTTCTCCTGGGCGGCCATGTGGTTCATGACGGTTTGCATATCTTTGTCGCC > 1:227324/1‑112 TTCGCCGAGCTGAAGGCCGAAGGCCGCTCGGCGAAGCGTTGTTCAAGACGGCTCATGCCTGTTTCTCCTGGGCGGCCATGTGGTTCATGACGGTTTGCATATCTTTGTCGCC < 2:227324/112‑1 CTCGGCGAAGCGTTGTTCAAGACGGCTCATGCCTGTTTCTCCTGGGCGGCCATGTGGTTCATGACGGTTTGCATATCTTTGTCGCCGCGGCCCGACAGGCACACGACCATCAG < 1:472800/113‑1 CTCGGCGAAGCGTTGTTCAAGACGGCTCATGCCTGTTTCTCCTGGGCGGCCATGTGGTTCATGACGGTTTGCATATCTTTGTCGCCGCGGCCCGACAGGCACACGACCATCAG > 2:472800/1‑113 GCGAAGCGTTGTTCAAGACGGCTCATGCCTGTTTCTCCTGGGCGGCCATGTGGTTCATGACGGTTTGCATATCTTTGTCGCCGCGGCCCGACAGGCACACGACCAGCAGGTGGTCCTTGGGCAGCTTCGGTGCGCGCTTGATCGCTTCGG < 2:757697/150‑1 CGAAGCTGCCCAAGGACCACCTGATGGTCGTGTGCCTGTCGGGCCGCGGCGACAAAGATATGCAAACCGTCATGAACCACATGGCCGCCCAGGAGAAACAGGCATGAGCCGTCTTGAACAACGCTTCGCCGAGCTGAAGGCCGAAGGCCGCTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/92482‑92327‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctcggcGAAGCGTTGTTCAAGACGGCTCATGCCTGTTTCTCCTGGGCGGCCATGTGGTTCATGACGGTTTGCATATCTTTGTCGCCGCGGCCCGACAGGCACACGACCATCAGGTGGTCCTTGGGCAGCTTCGGTGCGCGCTTGATCGCTTCGG > NC_002947/92356‑92503 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |