| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 199771 | 72 (0.990) | 6 (0.080) | 5/240 | NT | 7.8% | coding (5277/26049 nt) | PP_0168 | putative surface adhesion protein |
| ? | NC_002947 | = 199796 | 73 (1.030) | coding (5302/26049 nt) | PP_0168 | putative surface adhesion protein | |||||
GGCCAAGCTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/199654‑199771‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgCCACGACGACAGTGGTGCCGTCG‑GTCAGCTTGAAGTACAGCTCCGAGTGGTTATTGATCGGCAGACCGTCTTTGTTGGTCAGGGTGATGGTGTAGGTGATCTCACCGCCTTCGGTCACCGAAGGGGTGGCAGTCAGCTTGGCCACCAC < NC_002947/199796‑199649 GGCCAAGCTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAG < 1:651846/115‑1GGCCAAGCTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAG > 2:651846/1‑115 gAAGCTGACCGCGACCCCTTCAGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGCCACGACGACAGTGGTGCCGTCG‑GTCAGCTTGAAG < 2:136337/149‑1 GACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGCCACGACGACAGTGGTGCCGTCG‑GTCAGCTTGAAGTACAGC < 1:2603/150‑1 ACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGCCACGACGACAGTGGTGCCGTCG‑GTCAGCTTGAAGTACAGCTCCGAGTGGTTAT > 1:552451/1‑104 ACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGCCACGACGACAGTGGTGCCGTCG‑GTCAGCTTGAAGTACAGCTCCGAGTGGTTAT < 2:552451/104‑1 CCACTCGGAGCTGTACTTCAAGCTGAC‑CGACGGCACCACTGTCGTCGTGGCAGCTTGAAGTACAGCTCCGAGTGGTTATTGATCGGCAGACCGTCTTTGTTGGTCAGGGTGATGGTGTAGGTGATCTCACCGCCTTCGGTCACCGAAGGG > 1:22676/1‑150 GGAGCTGTACTTCAAGCTGAC‑CGACGGCACCACTGTCGTCGTGGCAGCTTGAAGTACAGCTCCGAGTGGTTATTGATCGGCAGACCGTCTTTGTTGGTCAGGGTGATGGTGTAGGTGATCTCACCGCCTTCGGTCACCGAAGGGGTGGCA < 2:22676/150‑1 GCTGCCACGACGACAGTGGTGCCGTCG‑GTCAGCTTGAAGTACAGCTCCGAGTGGTTATTGATCGGCAGACCGTCTTT < 1:1937055/77‑1 GCTGCCACGACGACAGTGGTGCCGTCG‑GTCAGCTTGAAGTACAGCTCCGAGTGGTTATTGATCGGCAGACCGTCTTT < 1:966788/77‑1 GCTGCCACGACGACAGTGGTGCCGTCG‑GTCAGCTTGAAGTACAGCTCCGAGTGGTTATTGATCGGCAGACCGTCTTT > 2:1937055/1‑77 GCTGCCACGACGACAGTGGTGCCGTCG‑GTCAGCTTGAAGTACAGCTCCGAGTGGTTATTGATCGGCAGACCGTCTTT > 2:966788/1‑77 CTGCCACGACGACAGTGGTGCCGTCG‑GTCAGCTTGAAGTACAGCTCCGAGTGGTTATTGATCGGCAGACCGTCTTTGTTGGTCAGGGTGATGGTGTAGGTGATCTCACCGCCTTCGGTCACCGAAGGGGTGGCAGTCAGCTTGGCCACCA > 1:327634/1‑150 TGCCACGACGACAGTGGTGCCGTCG‑GTCAGCTTGAAGTACAGCTCCGAGTGGTTATTGATCGGCAGACCGTCTTTGTTGGTCAGGGTGATGGTGTAGGTGATCTCACCGCCTTCGGTCACCGAAGGGGTGGCAGTCAGCTTGGCCACCAC < 1:215432/150‑1 GGCCAAGCTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/199654‑199771‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgCCACGACGACAGTGGTGCCGTCG‑GTCAGCTTGAAGTACAGCTCCGAGTGGTTATTGATCGGCAGACCGTCTTTGTTGGTCAGGGTGATGGTGTAGGTGATCTCACCGCCTTCGGTCACCGAAGGGGTGGCAGTCAGCTTGGCCACCAC < NC_002947/199796‑199649 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |