| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 264723 | 71 (0.970) | 5 (0.070) | 5/234 | NT | 6.9% | intergenic (+31/‑47) | gabD‑I/PP_mr03 | succinate‑semialdehyde dehydrogenase/gabT regulatory region |
| ? | NC_002947 | = 264742 | 69 (1.000) | intergenic (+50/‑28) | gabD‑I/PP_mr03 | succinate‑semialdehyde dehydrogenase/gabT regulatory region | |||||
CGGCCTGATCTCCAACGAAGTGGCGCCGTTCGGTGGTATCAAGGCTTCGGGCCTGGGCCGCGAAGGTTCCAAGTACGGTATCGAGGACTACCTCGAAATCAAATACCTGTGCATCAGCGTCTGATAGCACGGTAAAGGCTTTACCTCTGCCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/264569‑264723‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagcgAGACGTCGCTCTCGCGCCCCGCTGGCAGAGGTAAAGCCTTTACCGTGCTATCAGACGCTGATGCACAGGTATTTGATTTCGAGGTAGTCCTCGATACCGTACTTGGAACCTTCGCGGCCCAGGCCCGAAGCCTTGATACCACCGAA < NC_002947/264742‑264597 CGGCCTGATCTACAAAGAAGTGGCGCCGTCCACTGATATCAAGGCTTAGGGCCTGGGCCGCGAAGGTTCCAAGTACGGTATCGAGGACTACCTCGAAATCAAATACCTGTGCATCAGCGTCTGATAGCACGGTAAAGGCTTTACCTCTGC < 2:356105/150‑1 TCCAACGAAGTGGCGCCGTTCGGTGGTATCAAGGCTTCGGGCCTGGGCCGCGAAGGTTCCAAGTACGGTATCGAGGACTACCTCGAAATCAAATACCTGTGCATCAGCGTCTGATAGCACGGTAAAGGCTTTACCTCTGCCAGCGAGACG > 2:619050/1‑150 GGCTTCGGGCCTGGGCCGCGAAGGTTCCAAGTACGGTATCGAGGACTACCTCGAAATCAAATACCTGTGCATCAGCGTCTGATAGCACGGTAAAGGCTTTACCTCTGCCAGCGAGACGTCGCTCTCGCGCCCCGCTGGCAGAGGTAAAGC < 1:619050/150‑1 GGGCCTGGGCCGCGAAGGTTCCAAGTACGGTATCGAGGACTACCTCGAAATCAAATACCTGTGCATCAGCGTCTGATAGCACGGTAAAGGCTTTACCTCTGCCAGCGAGACGTCGCTCTCGCGCCCCGCTGG > 1:382639/1‑132 GGGCCTGGGCCGCGAAGGTTCCAAGTACGGTATCGAGGACTACCTCGAAATCAAATACCTGTGCATCAGCGTCTGATAGCACGGTAAAGGCTTTACCTCTGCCAGCGAGACGTCGCTCTCGCGCCCCGCTGG < 2:382639/132‑1 GTATCGAGGACTACCTCGAAATCAAATACCTGTGCATCAGCGTCTGATAGCACGGTAAAGGCTTTACCTCTGCCAGCGAGACGTCGCTCTCGCGCCCCGCTGGCAGAGGTAAAGCCTTTACCGTGCTATCA > 1:1907470/1‑131 GTATCGAGGACTACCTCGAAATCAAATACCTGTGCATCAGCGTCTGATAGCACGGTAAAGGCTTTACCTCTGCCAGCGAGACGTCGCTCTCGCGCCCCGCTGGCAGAGGTAAAGCCTTTACCGTGCTATCA < 2:1907470/131‑1 CCAGCGAGACGTCGCTCTCGCGCCCCGCTGGCAGAGGTAAAGCCTTTACCGTGCTATCAGACGCTGATGCACAGGTATTTGATTTCGAGGTAGTCCTCGATACCGTACTTGGAACCTTCGCGGCCCAGGCCCGAAGCCTTGATACCACCG > 1:177813/1‑150 CAGCGAGACGTCGCTCTCGCGCCCCGCTGGCAGAGGTAAAGCCTTTACCGTGCTATCAGACGCTGATGCACAGGTATTTGATTTCGAGGTAGTCCTCGATACCGTACTTGGAACCTTCGCGGCC > 1:1302648/1‑124 CAGCGAGACGTCGCTCTCGCGCCCCGCTGGCAGAGGTAAAGCCTTTACCGTGCTATCAGACGCTGATGCACAGGTATTTGATTTCGAGGTAGTCCTCGATACCGTACTTGGAACCTTCGCGGCC < 2:1302648/124‑1 AGCGAGACGTCGCTCTCGCGCCCCGCTGGCAGAGGTAAAGCCTTTACCGTGCTATCAGACGCTGATGCACAGGTATTTGATTTCGAGGTAGTCCTCGATACCGTACTTGGAACCTTCGCGGCCCAGGCCCGAAGCCTTGATACCACCGAA > 1:1571799/1‑150 CGAGACGTCGCTCTCGCGCCCCGCTGGCAGAGGTAAAGCCTTTACCGTGCTATCAGACGCTGATGCACAGGTATTTGATTTCGAGGTAGTCCTCGATACCGTACTTGGAACCTTCGCGGCCCAGGCCCGAAGCCTTG < 1:1463264/137‑1 CGAGACGTCGCTCTCGCGCCCCGCTGGCAGAGGTAAAGCCTTTACCGTGCTATCAGACGCTGATGCACAGGTATTTGATTTCGAGGTAGTCCTCGATACCGTACTTGGAACCTTCGCGGCCCAGGCCCGAAGCCTTG > 2:1463264/1‑137 CGGCCTGATCTCCAACGAAGTGGCGCCGTTCGGTGGTATCAAGGCTTCGGGCCTGGGCCGCGAAGGTTCCAAGTACGGTATCGAGGACTACCTCGAAATCAAATACCTGTGCATCAGCGTCTGATAGCACGGTAAAGGCTTTACCTCTGCCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/264569‑264723‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagcgAGACGTCGCTCTCGCGCCCCGCTGGCAGAGGTAAAGCCTTTACCGTGCTATCAGACGCTGATGCACAGGTATTTGATTTCGAGGTAGTCCTCGATACCGTACTTGGAACCTTCGCGGCCCAGGCCCGAAGCCTTGATACCACCGAA < NC_002947/264742‑264597 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |