New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 363546 | 54 (0.740) | 5 (0.080) | 5/214 | NT | 8.4% | intergenic (‑61/+106) | lcdH/PP_0303 | L‑carnitine dehydrogenase/dehydrocarnitine cleavage enzyme |
? | NC_002947 | = 363605 | 62 (0.990) | intergenic (‑120/+47) | lcdH/PP_0303 | L‑carnitine dehydrogenase/dehydrocarnitine cleavage enzyme |
GCCACCACATCCAGGCCATGGGCCAGGGCGCGGGCGACCCAGCCGCTGCCGATCACGCCGCTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/363382‑363546 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accctgtgggagcgggcGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGTTAGCCATGAACCCTGATTACTGTGTTTTACCCTGAGGACCAGCTATGCCCTTTATCACTGAAATCAAAACCT < NC_002947/363605‑363458 GCCACCACATCCAGGCCATGGGCCAGGGCGCGGGCGACCCAGCCGCTGCCGATCACGCCGCTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAAC > 1:827893/1‑150 CCACCACATCCAGGCCATGGGCCAGGGCGCGGGCGACCCAGCCGCTGCCGATCACGCCGCTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACC < 2:939472/150‑1 CACCACATCCAGGCCATGGGCCAGGGCGCGGGCGACCCAGCCGCTGCCGATCACGCCGCTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCATCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCC > 1:1655140/1‑150 ACCACATCCAGGCCATGGGCCAGGGCGCGGGCGACCCAGCCGCTGCCGATCACGCCGCTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCT < 2:922773/150‑1 CACATCCAGGCCATGGGCCAGGGCGCGGGCGACCCAGCCGCTGCCGATCACGCCGCTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGT < 2:851625/150‑1 ACATCCAGGCCATGGGCCAGGGCGCGGGCGACCCAGCCGCTGCCGATCACGCCGCTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGTTCCTCGGGTTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTG < 1:339430/150‑1 ACATCCAGGCCATGGGCCAGGGCGCGGGCGACCCAGCCGCTGCCGATCACGCCGCTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTG < 1:518316/150‑1 CATCCAGGCCATGGGCCAGGGCGCGGGCGACCCAGCCGCTGCCGATCACGCCGCTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGG < 1:343856/150‑1 CAGGCCATGGGCCAGGGCGCGGGCGACCCAGCCGCTGCCGATCACGCCGCTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGC > 2:907319/1‑150 CCATGGGCCAGGGCGCGGGCGACCCAGCCGCTGCCGATCACGCCGCTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGC > 2:879408/1‑150 CAGGGCGCGGGCGACCCAGCCGCTGCCGATCACGCCGCTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACC < 1:170620/128‑1 CAGGGCGCGGGCGACCCAGCCGCTGCCGATCACGCCGCTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACC > 2:170620/1‑128 GGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCTGGCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGAGGCCATGCC < 2:1484506/150‑1 AGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTC < 1:1460790/143‑1 AGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTC > 2:1460790/1‑143 GTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCC > 1:695852/1‑115 GTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCC < 2:695852/115‑1 ACCCTGTGGGAGCGGGCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGTTAGCCATGAACCCTGATTACTGTGTTTTACCCTGAGGACCAGCTATGCCCTTTATCA < 1:15007/150‑1 CCTGTGGGAGCTGGCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGTTAGCCATGAACCCTGATTACTGTGTTTTA > 1:270219/1‑120 CCTGTGGGAGCTGGCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGTTAGCCATGAACCCTGATTACTGTGTTTTA < 2:270219/120‑1 CCTGTGGGAGCGGGCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGTTAGCCATGAACCCTGATTACTGTGTTTTACCCTGAGGACCAGCTATGCCCTTTATCACT > 1:1380176/1‑150 CCTGTGGGAGCGGGCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGTTAGCCATGAACCCTGATTACTGTGTTTTACCCTGAGGACCAGCTATGCCCTTTATCACT < 2:1753392/150‑1 CCTGTGGGAGCGGGCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGTTAGCCATGAACC < 1:818295/103‑1 CCTGTGGGAGCGGGCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGTTAGCCATGAACC > 2:818295/1‑103 CTGTGGGAGCGGGCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGTTAGCCATGAACCCTGATTACTGTGTTTTACCCTGAGGACCAGCTATGCCCTTTATCACTG > 2:530698/1‑150 TGTGGGGGCGGGCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGTTAGCCATGAACCCTGATTACTGTGTTTTACCCTGAGGACCAGCTATGCCCTTTATCACTGA > 2:1530373/1‑150 TGGGAGCGGGCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGTTAGCCATGAACCCTGATTACTGTGTTTTACCCTGAGGACCAGCTATGCCCTTTATCACTGAAA < 2:579505/150‑1 GGGAGCGGGCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGTTAGCCATGAACCCTGATTACTGTGTTTTACCCTGAGGACCAGCTATGCCCTTTATCACTGAAAT < 2:372200/150‑1 GGGAGCGGGCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGTTAGCCATGAACCCTGATTACTGTGTTTTACCCTGAGGACCAGCTATGCCCTTTATCACTGAAAT > 2:1053998/1‑150 CGGGCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGTTAGCCATGAACCCTGATTACTGTGTTTTACCCTGAGGACCAGCTATGCCCTTTATCACTGAAATCAAAA < 2:1776066/150‑1 GCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGTTAGCCATGAACCCTGATTACTGTGTTTTACCCTGAGGACCAGCTATGCCCTTTATCACTGAAATCAAAACCT < 2:1482241/150‑1 GCCACCACATCCAGGCCATGGGCCAGGGCGCGGGCGACCCAGCCGCTGCCGATCACGCCGCTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/363382‑363546 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accctgtgggagcgggcGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGTTAGCCATGAACCCTGATTACTGTGTTTTACCCTGAGGACCAGCTATGCCCTTTATCACTGAAATCAAAACCT < NC_002947/363605‑363458 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |