New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 429963 = | 79 (1.080) | 5 (0.070) | 5/234 | NT | 6.6% | coding (420/711 nt) | PP_0353 | exonuclease |
? | NC_002947 | 429987 = | 68 (0.990) | coding (396/711 nt) | PP_0353 | exonuclease |
ACGCCAGCGTACTGATCCACGGTTTGGGCCCCAGCGCCCTGGCTGCCGGTTGCGACCCGGCCGAGGCCCTGCTGGATTTGCTCGATTTCATTGGCAACAGCCCGGTGCTGGCGTTTCACGCGCCATTCGACCAGCGCATGCTGGC‑GCGTGCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/430117‑429963 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcgctgGTCGAATGGCGCGTGAAACGCCAGCACCGGGCTGTTGCCAATGAAATCGAGCAAATCCAGCAGGGCCTCGGCCGGGTCGCAACCGGCAGCCAGGGCGCTGGGGCCCAAACCGTGGATCAGTACGCTGGCGTTGGTCTTCTGCAAA > NC_002947/429987‑430131 ACGCCAGCGTACTGATCCACGGTTTGGGCCCCAGCGCCCTGGCTGCCGGTTGCGACCCGGCCGAGGCCCTGCTGGATTTGCTCGATTTCATTGGCAACAGCCCGGTGCTGGCGTTTCACGCGCCATTCGACCAGCGCATGCTGGC‑GCGTG > 1:798318/1‑150 CAGCGTACTGATCCACGGTTTGGGCCCCAGCGCCCTGGCTGCCGGTTGCGACCCGGCCGAGGCCCTGCTGGATTTGCTCGATTTCATTGGCAACAGCCCGGTGCTGGCGTTTCACGCGCCATTCGACCAGCGCATGCTGGC‑GCGTGCGCT > 1:1311974/1‑150 CAGCGTACTGATCCACGGTTTGGGCCCCAGCGCCCTGGCTGCCGGTTGCGACCCGGCCGAGGCCCTGCTGGATTTGCTCGATTTCATTGGCAACAGCCCGGTGCTGGCGTTTCACGCGCCATTCGACCAGCGCATGCTGGC‑GCGTGCGCT < 2:433296/150‑1 CAGCGTACTGATCCACGGTTTGGGCCCCAGCGCCCTGGCTGCCGGTTGCGACCCGGCCGAGGCCCTGCTGGATTTGCTCGATTTCATTGGCAACAGCCCGGTGCTGGCGGTTCACGCGCCATTCGACCAGCGCATGCTGGC‑GCGTGCGCT > 1:511117/1‑150 CACGGTTTGGGCCCCAGCGCCCTGGCTGCCGGTTGCGACCCGGCCGAGGCCCTGCTGGATTTGCTCGATTTCATTGGCAACAGCCCGGTGCTGGCGTTTCACGCGCCATTCGACCAGCGCATGCTGGC‑GCGTGCGC > 1:814079/1‑136 CACGGTTTGGGCCCCAGCGCCCTGGCTGCCGGTTGCGACCCGGCCGAGGCCCTGCTGGATTTGCTCGATTTCATTGGCAACAGCCCGGTGCTGGCGTTTCACGCGCCATTCGACCAGCGCATGCTGGC‑GCGTGCGC < 2:814079/136‑1 TGGCTGCCGGTTGCGACCCGGCCGAGGCCCTGCTGGATTTGCTCGATTTCATTGGCAACAGCCCGGTGCTGGCGTTTCACGCGCCATTCGACCAGCGCATGCTGGC‑GCGT > 1:1080706/1‑110 TGGCTGCCGGTTGCGACCCGGCCGAGGCCCTGCTGGATTTGCTCGATTTCATTGGCAACAGCCCGGTGCTGGCGTTTCACGCGCCATTCGACCAGCGCATGCTGGC‑GCGT < 2:1080706/110‑1 TGCCGGTTGCGACCCGGCCGAGGCCCTGCTGGATTTGCTCGATTTCATTGGCAACAGCCCGGTGCTAGCGTTTCACGCGCCATTCGACCAGCGCACGC‑GCCAGCATGCGCTGGTCGAATGGCGCGTGAAACGCCAGCACCGG < 1:84683/142‑1 TGCCGGTTGCGACCCGGCCGAGGCCCTGCTGGATTTGCTCGATTTCATTGGCAACAGCCCGGTGCTAGCGTTTCACGCGCCATTCGACCAGCGCACGC‑GCCAGCATGCGCTGGTCGAATGGCGCGTGAAACGCCAGCACCGG > 2:84683/1‑142 GACCCGGCCGAGGCCCTGCTGGATTTGCTCGATTTCATTGGCAACAGCCCGGTGCTGGCGTTTCACGCGCCATTCGACCAGCGCACGCGCCA‑GCATGCGCTGGTCGAATG > 1:868292/1‑110 GACCCGGCCGAGGCCCTGCTGGATTTGCTCGATTTCATTGGCAACAGCCCGGTGCTGGCGTTTCACGCGCCATTCGACCAGCGCACGCGCCA‑GCATGCGCTGGTCGAATG < 2:868292/110‑1 CAGCGCATGCTGGC‑GCGTGCGCTGGTCGAATGGCGCGTGAAACGCCAGCACCGGGCTGTTGCCAATGAAATCGAGCAAATCCAGCAGGGCCTCGGCCGGGTCGCAACCGGCAGCCAGGGCGCTGGGGCCCAAACCGTGGATCAGTACGCT > 1:904346/1‑150 ttCTGGTCGAATGGCGCGTGAAACGCCAGCACCGGGCTGTTGCCAATGAGATCGAGCAAATCCAGCAGGGCCTCGGCCGGGTCGCAACCGGCAGCCAGGGCGCTGGGGCCGAAAACTTGCATCAGTACGCTGGCGTTGGTCTTCTGCAAA < 1:1425001/148‑1 GCTGGTCGAATGGCGCGTGAAACGCCAGCACCGGGCTGTTGCCAATGAAATCGAGCAAATCCAGCAGGGCCTCGGCCGGGTCGCAACCGGCAGCCAGGGCGCTGGGGCCCAAACCGTGGATCAGTACGCTGGCGTTGGTCTTCTGCAAA < 1:242822/149‑1 GCTGGTCGAATGGCGCGTGAAACGCCAGCACCGGGCTGTTGCCAATGAAATCGAGCAAATCCAGCAGGGCCTCGGCCGGGTCGCAACCGGCAGCCAGGGCGCTGGGGCCCAAACCGTGGATCAGTACGCTGGCGTTGGTCTTCTGCAAA > 2:242822/1‑149 ACGCCAGCGTACTGATCCACGGTTTGGGCCCCAGCGCCCTGGCTGCCGGTTGCGACCCGGCCGAGGCCCTGCTGGATTTGCTCGATTTCATTGGCAACAGCCCGGTGCTGGCGTTTCACGCGCCATTCGACCAGCGCATGCTGGC‑GCGTGCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/430117‑429963 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcgctgGTCGAATGGCGCGTGAAACGCCAGCACCGGGCTGTTGCCAATGAAATCGAGCAAATCCAGCAGGGCCTCGGCCGGGTCGCAACCGGCAGCCAGGGCGCTGGGGCCCAAACCGTGGATCAGTACGCTGGCGTTGGTCTTCTGCAAA > NC_002947/429987‑430131 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |