| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 529914 = | 53 (0.730) | 7 (0.110) | 7/226 | NT | 11.5% | intergenic (+8/‑176) | PP_5SC/birA | 5S ribosomal RNA/bifunctional biotin‑[acetyl‑CoA‑carboxylase] ligase/biotin operon repressor BirA |
| ? | NC_002947 | 529950 = | 60 (0.900) | intergenic (+44/‑140) | PP_5SC/birA | 5S ribosomal RNA/bifunctional biotin‑[acetyl‑CoA‑carboxylase] ligase/biotin operon repressor BirA | |||||
GCTTGCATAGGAAAAGGGCCTGCAGGAGAGGCCGCGTATCGCAATCACAGGGAGGAGCATTGGCAAGGCCAGGATTTTTAAGCCCACAAAGACAAAACCCCTACCTGCATGCGCAGATAGGGGTTTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/530041‑529914‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taggggttttgTCTTTGTGGGCTTAAAAATCCTGGCCTTGCCAATGCTCCTCCCTGTGATTGCGATACGCGGCCTCTCCTGCAGGCCCTTTTCCTATGCAAGCCAACAGCCCATGGCTATCATGCCTGCCTTATTCCAAGTCGAGACTGGCATGCTGA > NC_002947/529950‑530096 GCTTGCATAGGAAAAGGGCCTGCAGGAGAGGCCGCGTATCGCAATCACAGGGAGGAGCATTGGCAAGGCCAGGATTTTTAAGCCCACAAAGGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGTGGGCTTAAAAATCCT > 1:1543469/1‑150 TGCATAGGAAAAGGGCCTGCAGGAGAGGCCGCGTATCGCAATCACAGGGAGGAGCATTGGCAAGGCCAGGATTTTTAAGCCCACAAAGGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGTGGGCTTAAAAATCCTGGC < 2:1543469/150‑1 ATAGGAAAAGGGCCTGCAGGAGAGGCCGCGTATCGCAATCACAGGGAGGAGCATTGGCAAGGCCAGGATTTTTAAGCCCACAAAGACAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGTGGGCTTAAAAATCCTGGCCTT < 1:1751606/150‑1 ATAGGAAAAGGGCCTGCAGGAGAGGCCGCGTATCGCAATCACAGGGAGGAGCATTGGCAAGGCCAGGATTTTTAAGCCCACAAAGACAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGTG < 2:792933/130‑1 ATAGGAAAAGGGCCTGCAGGAGAGGCCGCGTATCGCAATCACAGGGAGGAGCATTGGCAAGGCCAGGATTTTTAAGCCCACAAAGACAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGTG > 1:792933/1‑130 TGCAGGAGAGGCCGCGTATCGCAATCACAGGGAGGAGCATTGGCAAGGCCAGGATTTTTAAGCCCACAAAGACAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGTGGGCTTAAAAATCCTG > 1:604638/1‑131 TGCAGGAGAGGCCGCGTATCGCAATCACAGGGAGGAGCATTGGCAAGGCCAGGATTTTTAAGCCCACAAAGACAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGTGGGCTTAAAAATCCTG < 2:604638/131‑1 CACAAAGACAAAACCCCTACCTGCATGCGCAGATAGGGGTTTTG > 1:426582/1‑44 CACAAAGACAAAACCCCTACCTGCATGCGCAGATAGGGGTTTTG < 2:426582/44‑1 TAGGGGTTTTGTCTTTGTGGGCTTAAAAATCCTGGCCTTGCCAATGCTCCTCCCTGTGATTGCGATACGCGGCCTCTCCTGCAGGCCCTTTTCCTATGCAAGCCAACAGCCCATGGCTATCATGCCTGCCTTATTCCAAGTCGAGACTGG < 1:1100643/150‑1 AGGGGTTTTGTCTTTGTGGGCTTAAAAATCCTGGCCTTGCCAATGCTCCTCCCTGTGATTGCGATACGCGGCCTCTCCTGCAGGCCCTTTTCCTATGCAAGCCAACAGCCCATGGCTATCATGCCTGCCTTATTCCAAGTCGAGACTGGC < 1:1134785/150‑1 AGGGGTTTTGTCTTTGTGGGCTTAAAAATCCTGGCCTTG < 1:551098/39‑1 AGGGGTTTTGTCTTTGTGGGCTTAAAAATCCTGGCCTTG > 2:551098/1‑39 GGTTTTGTCTTTGTGGGCTTAAAAATCCTGGCCTTGCCAATGCTCCTCCCTGTGATTGCGATACGCGGCCTCTCCTGCAGGCCCTTTTCCTATGCAAGCCAACAGCCCATGGCTATCATGCCTGCCTTATTCCAAGTCGAGACTGGCATG < 1:1654948/150‑1 TTTTGTCTTTGTGGGCTTAAAAATCCTGGCCTTGCCAATGCTCCTCCCTGTGATTGCGATACGCGGCCTCTCCTGCAGGCCCTTTTCCTATGCAAGCCAACAGC > 1:166191/1‑104 TTTTGTCTTTGTGGGCTTAAAAATCCTGGCCTTGCCAATGCTCCTCCCTGTGATTGCGATACGCGGCCTCTCCTGCAGGCCCTTTTCCTATGCAAGCCAACAGC < 2:166191/104‑1 TTGTCTTTGTGGGCTTAAAAACCCTGGCCTTGCCAATGCTCCTCCCTGTGATTGCGATACGCGGCCTCTCCTGCAGGCCCTTTTCCTATGCAAGCCAACAGCCCATGGCTATCATGCCTGCCTTATTCCAAGTCGAGACTGGCATGCTGA > 2:1655101/1‑150 GCTTGCATAGGAAAAGGGCCTGCAGGAGAGGCCGCGTATCGCAATCACAGGGAGGAGCATTGGCAAGGCCAGGATTTTTAAGCCCACAAAGACAAAACCCCTACCTGCATGCGCAGATAGGGGTTTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/530041‑529914‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taggggttttgTCTTTGTGGGCTTAAAAATCCTGGCCTTGCCAATGCTCCTCCCTGTGATTGCGATACGCGGCCTCTCCTGCAGGCCCTTTTCCTATGCAAGCCAACAGCCCATGGCTATCATGCCTGCCTTATTCCAAGTCGAGACTGGCATGCTGA > NC_002947/529950‑530096 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |