New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	647234 =	61 (0.840)	4 (0.060)	4/232	NT	6.8%	coding (854/1854 nt)	acoR	acetoin catabolism regulatory protein
	?	NC_002947	647262 =	53 (0.780)					coding (882/1854 nt)	acoR	acetoin catabolism regulatory protein

AGCACCGCCAGGTTGCAGTCCTTGACCCGCGTGGCCAACCGCAGGTGTTGCTCGATACGGGTGTCCTGGGCCTGGCGCAAAGGCTGCGCACGCTGGCGTTGCTGCGGTGCGCTGACCCGGCCATACAAACCGCCCAGACCAGGCAGGCGCTGGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/647390‑647234 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgggcggTTTGTATGGCCGGGTCAGCGCACCGCAGCAACGCCAGCGTGCGCAGCCTTTGCGCCAGGCCCAGGACACCCGTATCGAGCAACACCTGCGGTTGGCCACGCGGGTCAAGGACTGCAACCTGGCGGTGCTGGTACTGGGTGAGACCGGGG  >  NC_002947/647262‑647410                                                                                                                                                                                                                                                                                                                    AGCACCGCCAGGTTGCAGTCCTTGACCCGCGTGGCCAACCGCAGGTGTTGCTCGATACGGGTGTCCTGGGCCTGGCGCAAAGGCTGCGCACGCTGGCGTTGCTGCGGTGCGCTGACCCGGCCATACAAACCGCCCAGACCAGGCAGGCGC                                                                                                                                                              >  2:1686046/1‑150  GCACCGCCAGGTTGCAGTCCTTGACCCGCGTGGCCAACCGCAGGTGTTGCTCGATACGGGTGTCCTGGGCCTGGCGCAAAGGCTGCGCACGCTGGCGTTGCTGCGGTGCGCTGACCCGGCCATACAAACCGCCCAGACCAGGCAGGCGCT                                                                                                                                                             >  2:1850723/1‑150    ACCGCCAGGTTGCAGTCCTTGACCCGCGTGGCCAACCGCAGGTGTTGCTCGATACGGGTGTCCTGGGCCTGGCGCAAAGGCTGCGCACGCTGGCGTTGCTGCGGTGCGCTGACCCGGCCATACAAACCGCCCAGACCAGGCAGGCGCTGG                                                                                                                                                           <  1:1556501/150‑1    ACCGCCAGGTTGCAGTCCTTGACCCGCGTGGCCAACCGCAGGTGTTGCTCGATACGGGTGTCCTGGGCCTGGCGCAAAGGCTGCGCACGCTGGCGTTGCTGCGGACCGCTGACCCGGCCATACTAACCGCCCAGACCAGGCAGGCGCTGG                                                                                                                                                           <  2:1243902/150‑1       GCCAGGTTGCAGTCCTTGACCCGCGTGGCCAACCGCAGGTGTTGCTCGATACGGGTGTCCTGGGCCTGGCGCAAAGGCTGCGCACGCTGGCGTTGCTGCGGTGCGCTGACCCGGCCATACAAACCGCCCAGACCAGGCAGGCGCTGGGCG                                                                                                                                                        <  1:1836074/150‑1       GCCAGGTTGCAGTCCTTGACCCGCGTGGCCAACCGCAGGTGTTGCTCGATACGGGTGTCCTGGGCCTGGCGCAAAGGCTGCGCACGCTGGCGTTGCTGCGGTGCGCTGACCCGGCCATACAAACCGCCCAGACCAGGCAGGCGCTGGGCG                                                                                                                                                        >  2:1836074/1‑150                                                                                                                        GCCATACAAACCGCCCAGACCAGGCAGGCGCTGGGCGGTTTGTATGGCCGGGTCAGCGCACCGCAGCAACGCCAGCGTGCGCAGCCTTTGCGCCAGGCCCAGGACACCCGTATCGAGCAACACCTGCGGTTGGCCACGCGGGTCAAGGAC                                       >  2:396499/1‑150                                                                                                                          CATACAAACCGCCCAGACCAGGCAGGCGCTGGGCGGTTTGTATGGCCGGGTCAGCGCACCGCAGCAACGCCAGCGTGCGCAGCCTTTGCGCCAGGCCCAGGACACCCGTATCGAGCAACACCTGCGGTTGGCCACGCGGGTCAAGGACTG                                     <  1:396499/150‑1                                                                                                                                   CGCCCAGACCAGGCAGGCGCTGGGCGGTTTGTATGGCCGGGTCAGCGCACCGCAGCAACGCCAGCGTGCGCAGCCTTTTCGCCAGGCCCAG                                                                                       >  1:435183/1‑91                                                                                                                                   CGCCCAGACCAGGCAGGCGCTGGGCGGTTTGTATGGCCGGGTCAGCGCACCGCAGCAACGCCAGCGTGCGCAGCCTTTGCGCCAGGCCCAG                                                                                       <  2:435183/91‑1                                                                                                                                                        GGGCGGTTTGTATGGCCGGGTCAGCGCACCGCAGCAACGCCAGCGTGCGCAGCCTTTGCGCCAGGCCCAGGACACCCGTATCGAGCAACACCTGCGGTTGGCCACGCGGGTCAAGGACTGCAACCTGGCGGTGCTGGTACTGGGTGAGAC       >  2:1481693/1‑150                                                                                                                                                         GGCGGTTTGTATGGCCGGGTCAGCGCACCGCAGCAACGCCAGCGTGCGCAGCCTTTGCGCCAGGCCCAGGACACCCGTATCGAGCAACACCTGCGGTTGGCCACGCGGGTCAAGGACTGCAACCTGGCGGTGCTGGTACTGGGTGAGACC      >  2:1217258/1‑150                                                                                                                                                         GGCGGTTTGTATGGCCGGGTCAGCGCACCGCAGCAACGCCAGCGTGCGCAGCCTTTGCGCCAGGCCCAGGACACCCGTATCGAGCAACACCTGCGGTTGGCCACGCGGGTCAAGGACTGCAACCTGGCGGTGCT                      <  1:1134693/134‑1                                                                                                                                                         GGCGGTTTGTATGGCCGGGTCAGCGCACCGCAGCAACGCCAGCGTGCGCAGCCTTTGCGCCAGGCCCAGGACACCCGTATCGAGCAACACCTGCGGTTGGCCACGCGGGTCAAGGACTGCAACCTGGCGGTGCT                      >  2:1134693/1‑134                                                                                                                                                          GCGGTTTACATGGCCGGGTCAGCGCACCGCAGCAACGCCAGCGTGCGCAGCCTTTGCGCCAGGCCCAGGACACCCGTATCGAGCAACACCTGCGGTTGGCCACGCGGGTCAAGGACTGCAACCTGGCGGTGCTGGTACTGGGTGAGACCG     >  2:320528/1‑150                                                                                                                                                           CGGTTTGTATGGCCGGGTCAGCGCACCGCAGCAACGCCAGCGTGCGCAGCCTTTGCGCCAGGCCCAGGACACCCGTATCGAGCAACACCTGCGGTTGGCCACGCGGGTCAAGGACTGCAACCTGGCGGTGCTGGTACTGGGTGAGACCGG    <  1:1358285/150‑1                                                                                                                                                             GTTTGTATGGCCGGGTCAGCGCACCGCAGCAACGCCAGCGTGCGCAGCCTTTGCGCCAGGCCCAGGACACCCGTATCGAGCAACACCTGAGGTCGCTCACGCTTGTCAAGGACTGCAACCTGGCGGTGCTGGTACTGGGTGAGACCGGGG  <  2:1441929/150‑1                                                                                                                                                             GTTTGTATGGCCGGGTCAGCGCACCGCAGCAACGCCAGCGTGCGCAGCCTTTGCGCCAGGCCCA                                                                                        <  1:977669/64‑1                                                                                                                                                             GTTTGTATGGCCGGGTCAGCGCACCGCAGCAACGCCAGCGTGCGCAGCCTTTGCGCCAGGCCCA                                                                                        >  2:977669/1‑64                                                                                                                                                                                                                                                                                                                    AGCACCGCCAGGTTGCAGTCCTTGACCCGCGTGGCCAACCGCAGGTGTTGCTCGATACGGGTGTCCTGGGCCTGGCGCAAAGGCTGCGCACGCTGGCGTTGCTGCGGTGCGCTGACCCGGCCATACAAACCGCCCAGACCAGGCAGGCGCTGGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/647390‑647234 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgggcggTTTGTATGGCCGGGTCAGCGCACCGCAGCAACGCCAGCGTGCGCAGCCTTTGCGCCAGGCCCAGGACACCCGTATCGAGCAACACCTGCGGTTGGCCACGCGGGTCAAGGACTGCAACCTGGCGGTGCTGGTACTGGGTGAGACCGGGG  >  NC_002947/647262‑647410

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.