New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 810121 = | 84 (1.150) | 5 (0.070) | 5/236 | NT | 5.8% | coding (685/876 nt) | PP_0696 | hypothetical protein |
? | NC_002947 | 810160 = | 83 (1.200) | coding (724/876 nt) | PP_0696 | hypothetical protein |
GGTTTGGTAATAGGCATCGGCGTCGGCATTGGCGGCAAAACGCAGTGCCGGC‑AGGCCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/810180‑810121 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgacGCCGATGCCTATTACCAAACCCTGACGCTCGACAGCCTGGGCGACGCCTGGGCATTGCCGGGCCTTGAACTGTTGATGGACGAGCCGCAA > NC_002947/810160‑810249 GGTTTGGTAATAGGCATCGGCGTCGGCATTGGCGGCAAAACGCAGTGCCGGC‑AGGCCGACGCCGATGCCTATTACCAAACCCTGACGCTCGACAGCCTGGGCGACGCCTGGGCATTGCCGGGCCTTGAACTGTTGATGGACGAGCCGCAA > 2:1438793/1‑150 GTTTGGTAATAGGCATCGGCGTCGGCATTGGCGGCAAAACGCAGTGCCGGCAATGCCGACGCCGATGCCTATTACCAAACCCTGACGCTCGACAGCCTGGGCGACGCCTGGGCATTGCCGGGCCTTGAACTGTTGAT < 1:1779069/137‑1 GTTTGGTAATAGGCATCGGCGTCGGCATTGGCGGCAAAACGCAGTGCCGGCAATGCCGACGCCGATGCCTATTACCAAACCCTGACGCTCGACAGCCTGGGCGACGCCTGGGCATTGCCGGGCCTTGAACTGTTGAT > 2:1779069/1‑137 TCGGCATTGGCGGCAAAACGCAGTGCCGGC‑AGGCCGACGCCGATGCCTATTACCAAACCCTGACGCTCGACAGCCTG < 1:183563/77‑1 TCGGCATTGGCGGCAAAACGCAGTGCCGGC‑AGGCCGACGCCGATGCCTATTACCAAACCCTGACGCTCGACAGCCTG > 2:183563/1‑77 ACGCCGATGCCTATTACCAAACCCTGACGCTCGACAGCCTGGGCGACGCCTGGGCATTGCCGGGCCTT < 1:1706816/68‑1 ACGCCGATGCCTATTACCAAACCCTGACGCTCGACAGCCTGGGCGACGCCTGGGCATTGCCGGGCCTT > 2:1706816/1‑68 GGTTTGGTAATAGGCATCGGCGTCGGCATTGGCGGCAAAACGCAGTGCCGGC‑AGGCCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/810180‑810121 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgacGCCGATGCCTATTACCAAACCCTGACGCTCGACAGCCTGGGCGACGCCTGGGCATTGCCGGGCCTTGAACTGTTGATGGACGAGCCGCAA > NC_002947/810160‑810249 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |