New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 810121 =84 (1.150)5 (0.070) 5/236 NT 5.8% coding (685/876 nt) PP_0696 hypothetical protein
?NC_002947 810160 = 83 (1.200)coding (724/876 nt) PP_0696 hypothetical protein

GGTTTGGTAATAGGCATCGGCGTCGGCATTGGCGGCAAAACGCAGTGCCGGCAGGCCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/810180‑810121
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgacGCCGATGCCTATTACCAAACCCTGACGCTCGACAGCCTGGGCGACGCCTGGGCATTGCCGGGCCTTGAACTGTTGATGGACGAGCCGCAA  >  NC_002947/810160‑810249
                                                                                                                                                       
GGTTTGGTAATAGGCATCGGCGTCGGCATTGGCGGCAAAACGCAGTGCCGGCAGGCCGACGCCGATGCCTATTACCAAACCCTGACGCTCGACAGCCTGGGCGACGCCTGGGCATTGCCGGGCCTTGAACTGTTGATGGACGAGCCGCAA  >  2:1438793/1‑150
 GTTTGGTAATAGGCATCGGCGTCGGCATTGGCGGCAAAACGCAGTGCCGGCAATGCCGACGCCGATGCCTATTACCAAACCCTGACGCTCGACAGCCTGGGCGACGCCTGGGCATTGCCGGGCCTTGAACTGTTGAT               <  1:1779069/137‑1
 GTTTGGTAATAGGCATCGGCGTCGGCATTGGCGGCAAAACGCAGTGCCGGCAATGCCGACGCCGATGCCTATTACCAAACCCTGACGCTCGACAGCCTGGGCGACGCCTGGGCATTGCCGGGCCTTGAACTGTTGAT               >  2:1779069/1‑137
                      TCGGCATTGGCGGCAAAACGCAGTGCCGGCAGGCCGACGCCGATGCCTATTACCAAACCCTGACGCTCGACAGCCTG                                                     <  1:183563/77‑1
                      TCGGCATTGGCGGCAAAACGCAGTGCCGGCAGGCCGACGCCGATGCCTATTACCAAACCCTGACGCTCGACAGCCTG                                                     >  2:183563/1‑77
                                                           ACGCCGATGCCTATTACCAAACCCTGACGCTCGACAGCCTGGGCGACGCCTGGGCATTGCCGGGCCTT                          <  1:1706816/68‑1
                                                           ACGCCGATGCCTATTACCAAACCCTGACGCTCGACAGCCTGGGCGACGCCTGGGCATTGCCGGGCCTT                          >  2:1706816/1‑68
                                                                                                                                                       
GGTTTGGTAATAGGCATCGGCGTCGGCATTGGCGGCAAAACGCAGTGCCGGCAGGCCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/810180‑810121
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgacGCCGATGCCTATTACCAAACCCTGACGCTCGACAGCCTGGGCGACGCCTGGGCATTGCCGGGCCTTGAACTGTTGATGGACGAGCCGCAA  >  NC_002947/810160‑810249

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.