New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 824444	64 (0.880)	6 (0.090)	4/236	NT	8.6%	coding (163/1431 nt)	PP_0708	betaine‑aldehyde dehydrogenase
	?	NC_002947	= 824472	66 (0.950)					coding (135/1431 nt)	PP_0708	betaine‑aldehyde dehydrogenase

GCGATGGCGTCATCCAGGTCAATCTCCGCTTCGTGACGCGGTTTGCCGTTATTGCGCATCTGCACGGTGACAAGCGCTTCGCGGCGCTGCCCGAGCTGTTCGGCAAAACCACGCAGGAAGGCGGCACGTTCACTGGCGCAGGTGCTTTTCCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/824290‑824444 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaggcCGTCGCCGCTGCCCGCAGCGCCCTGCCCGCCTGGAAAAGCACCTGCGCCAGTGAACGTGCCGCCTTCCTGCGTGGTTTTGCCGAACAGCTCGGGCAGCGCCGCGAAGCGCTTGTCACCGTGCAGATGCGCAATAACGGCAAACC  <  NC_002947/824472‑824329                                                                                                                                                                                                                                                                                                             GCGATGGCGTCATCCAGGTCAATCTCCGCTTCGTGACGCGGTTTGCCGTTATTGCGCATCTGCACGGTGACAAGCGCTTCGCGGCGCTGCCCCAGCTGTTACGCAACACCACGCAGGAAGGCGGCACGTTCACTTGCGCAGGTGCTTTTC                                                                                                                                                       <  2:1875708/150‑1         GTCATCCAGGTCAATCTCCGCTTCGTGACGCGGTTTGCCGTTATTGCGCATCTGCACGGTGACAAGCGCTTCGCGGCGCTGCCCGAGCTGTTCGGCAAAACCACGCAGGAAGGCGGCACGTTCACTGGCGCAGGTGCTTTTCCAG                                                                                                                                                    <  2:1086539/145‑1         GTCATCCAGGTCAATCTCCGCTTCGTGACGCGGTTTGCCGTTATTGCGCATCTGCACGGTGACAAGCGCTTCGCGGCGCTGCCCGAGCTGTTCGGCAAAAACACGCAGGAAGGCGGCACGTTCACTGGCGCAGGTGCTTTTCCAG                                                                                                                                                    >  1:1086539/1‑145             TCCAGGTCAATCTCCGCTTCGTGACGCGGTTTGCCGTTATTGCGCATCTGCACGGTGACAAGCGCTTCGCGGCGCTGCCCGAGCTGTTCGGCAAAACCACGCAGGAAGGCGGCACGTTCACTGGCGCAGGTGCTTTTCCAGGCCGTCGCC                                                                                                                                           >  2:310938/1‑150                                      GCGGTTTGCCGTTATTGCGCATCTGCACGGTGACAAGCGCTTCGCGGCGCTGCCCGAGCTGTTCGGCAAAACCACGCAGGAAGGCGGCACGTTCACTGGCGCAGGTGCTTTTCCAGGCCGTCGCCGCTGCCCGCAGCGCCCTGCCCGCCT                                                                                                                  <  1:310938/150‑1                                                                                                   TTCGGCAAAACCACGCAGGAAGGCGGCACGTTCACTGGCGCAGGTGCTTTTCCAGGCCGTCGCCGCTGCCCGCAGCGCCCTGCCCGCCTG                                                                                                                 >  1:1214026/1‑90                                                                                                   TTCGGCAAAACCACGCAGGAAGGCGGCACGTTCACTGGCGCAGGTGCTTTTCCAGGCCGTCGCCGCTGCCCGCAGCGCCCTGCCCGCCTG                                                                                                                 <  2:1214026/90‑1                                                                                                               gCGCAGGAAGGCGGCACGTTCACTGGCGCAGGTGCTTTTCCAGGCCGTCGCCGCTGCCCGCAGCGCCCTGCCCGCCT                                                                                                                  <  1:334410/76‑1                                                                                                               gCGCAGGAAGGCGGCACGTTCACTGGCGCAGGTGCTTTTCCAGGCCGTCGCCGCTGCCCGCAGCGCCCTGCCCGCCT                                                                                                                  >  2:334410/2‑77                                                                                                                                                      CCAGGCCGTCGCCGCTGCCCGCAGCGCCCTGCCCGCCTGGAAAAGCACCTGCGCCAGTGAACGTGCCGCCTTCCTGCGTGGTTTTGCCGAACAGCTAGGGCAGCGCCGCGAAGCGCTTGTCACCGTGCAGATGCGCAATAACGGCAAACC  >  1:1390748/1‑150                                                                                                                                                                                                                                                                                                             GCGATGGCGTCATCCAGGTCAATCTCCGCTTCGTGACGCGGTTTGCCGTTATTGCGCATCTGCACGGTGACAAGCGCTTCGCGGCGCTGCCCGAGCTGTTCGGCAAAACCACGCAGGAAGGCGGCACGTTCACTGGCGCAGGTGCTTTTCCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/824290‑824444 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaggcCGTCGCCGCTGCCCGCAGCGCCCTGCCCGCCTGGAAAAGCACCTGCGCCAGTGAACGTGCCGCCTTCCTGCGTGGTTTTGCCGAACAGCTCGGGCAGCGCCGCGAAGCGCTTGTCACCGTGCAGATGCGCAATAACGGCAAACC  <  NC_002947/824472‑824329

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.