New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1001519 =68 (0.930)8 (0.110) 6/240 NT 10.4% coding (493/771 nt) PP_0863 hypothetical protein
?NC_002947 1001546 = 72 (1.020)coding (520/771 nt) PP_0863 hypothetical protein

TTCCCCGCAACCCGGGCCTGCTCCAGCCACTGCCCTGCCTCGGCCAACTGCCCACGCTCGACCAGCACCAGCGCCAGGCTGAACATCCCACGAAAATCCCCCGCCTCGGCCGAACGCCGATACCAGCGCACCGCCCGCGCCGGGCTGG‑‑‑‑‑GCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1001670‑1001519
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcTGGTATCGGCGTTCGGCCGAGGCGGGGGATTTTCGTGGGATGTTCAGCCTGGCGCTGGTGCTGGTCGAGCGTGGGCAGTTGGCCGAGGCAGGGCAGTGGCTGGAGCAGGCCCGGGTTGCGGGGAACATGAATTTCCTGCGTGCTGCGTT  >  NC_002947/1001546‑1001694
                                                                                                                                                                                                                                                                                                                   
TTCCCCGCAACCCGGGCCTGCTCCAGCCACTGCCCTGCCTCGGCCAACTGCCCACGCTCGACCAGCACCAGCGCCAGGCTGAACATCCCACGAAAATCCCCCGCCTCGGCCGAACGCCGATACCAGCGCACCGCCCGCGCCGGGCTGG‑‑‑‑‑GC                                                                                                                                                         <  2:772192/150‑1
  CCCCGCAACCCGGGCCTGCTCCAGCCACTGCCCTGCCTCGGCCAACTGCCCACGCTCGACCAGCACCAGCGCCAGGCTGAACATCCCACGAAAATCCCCCGCCTCGGCCGAACGCCGATACCAGCGCACCGCCCGCGCCGGGCTGG‑‑‑‑‑GCGC                                                                                                                                                       <  2:591340/150‑1
                        AGCCACTGCCCTGCCTCGGCCAACTGCCCACGCTCGACCAGCACCAGCGCCAGGCTGAACATCCCACGAAAATCCCCCGCCTCGGCCGAACGCCGATACCAGCGCCCAGCCCGGCGCGGGCGGT‑‑‑‑‑GCGCTGGTATCGGCGTTCGGCC                                                                                                                                     >  1:1427865/1‑146
                        AGCCACTGCCCTGCCTCGGCCAACTGCCCACGCTCGACCAGCACCAGCGCCAGGCTGAACATCCCACGAAAATCCCCCGCCTCGGCCGAACGCCGATACCAGCGCCCAGCCCGGCGCGGGCGGT‑‑‑‑‑GCGCTGGTATCGGCGTTCGGCC                                                                                                                                     <  2:1427865/146‑1
                                                    CACGCTCGACCAGCACCAGCGCCAGGCTGAACATCCCACGAAAATCCCCCGCCTCGGCCGAACGCCGATACCAGCGCCCAGCCCGGCGCGGGCGGT‑‑‑‑‑GCGCTGGTATCGGCGTTCGGCCGAGGCGG                                                                                                                              >  1:1825237/1‑125
                                                    CACGCTCGACCAGCACCAGCGCCAGGCTGAACATCCCACGAAAATCCCCCGCCTCGGCCGAACGCCGATACCAGCGCCCAGCCCGGCGCGGGCGGT‑‑‑‑‑GCGCTGGTATCGGCGTTCGGCCGAGGCGG                                                                                                                              <  2:1825237/125‑1
                                                                                                                           CAGCGCACCGCCCGCGCCGGGCTGG‑‑‑‑‑GCGCTGGTATCGGCGTTCGGCCGAGGCGGGGGATTTTCGTGGGATGTTCAGCCTGGCGCTGG                                                                                             <  1:1455209/87‑1
                                                                                                                           CAGCGCACCGCCCGCGCCGGGCTGG‑‑‑‑‑GCGCTGGTATCGGCGTTCGGCCGAGGCGGGGGATTTTCGTGGGATGTTCAGCCTGGCGCTGG                                                                                             >  2:1455209/1‑87
                                                                                                                            AGCGCACCGCCCGCGCCGGGCTGGGCGGTGCGCTGGTATCGGCGTTCGGCCGAGGCGGGGGATTTTCGTGGGATGTTCAGCCTGGCGCTGGTGCTGGTCGAGCGTGGGCAGTTGGCCGAGGCAG                                                            <  1:1118142/124‑1
                                                                                                                            AGCGCACCGCCCGCGCCGGGCTGGGCGGTGCGCTGGTATCGGCGTTCGGCCGAGGCGGGGGATTTTCGTGGGATGTTCAGCCTGGCGCTGGTGCTGGTCGAGCGTGGGCAGTTGGCCGAGGCAG                                                            >  2:1118142/1‑124
                                                                                                                                                            GCTGGTATCGGCGTTCGGCCGAGGCGGGGGATTTTCGTGGGATGTTCAGCCTGGCGCTGGTGCTGGTCGAGCGTGGGCAGTTGGCCGAGGCAGGGCAGTGGCTGGAGCAGGCCCGGGTTGCGGGGAACATGAATTTCCTGCGTGCTGCGT   >  2:562952/1‑150
                                                                                                                                                             CTGGTATCGGCGTTCGGCCGAGGCGGGGGATTTTCGTGGGATGTTCAGCCTGGCGCTGGTGCTGGTCGAGCGTGGGCAGTTGGCCGAGGCAGGGCAGTGGCTGGAGCAGGCCCGGGTTGCGGGGAACATGAATTTCCTGCGTGCTGCGTT  >  1:1942177/1‑150
                                                                                                                                                                                                                                                                                                                   
TTCCCCGCAACCCGGGCCTGCTCCAGCCACTGCCCTGCCTCGGCCAACTGCCCACGCTCGACCAGCACCAGCGCCAGGCTGAACATCCCACGAAAATCCCCCGCCTCGGCCGAACGCCGATACCAGCGCACCGCCCGCGCCGGGCTGG‑‑‑‑‑GCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1001670‑1001519
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcTGGTATCGGCGTTCGGCCGAGGCGGGGGATTTTCGTGGGATGTTCAGCCTGGCGCTGGTGCTGGTCGAGCGTGGGCAGTTGGCCGAGGCAGGGCAGTGGCTGGAGCAGGCCCGGGTTGCGGGGAACATGAATTTCCTGCGTGCTGCGTT  >  NC_002947/1001546‑1001694

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.