New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1005213 =	56 (0.770)	3 (0.040)	3/228	NT	5.6%	coding (140/2430 nt)	PP_0867	FecA‑like outer membrane receptor
	?	NC_002947	1005265 =	50 (0.750)					coding (192/2430 nt)	PP_0867	FecA‑like outer membrane receptor

GGTGTCCCCGGTCATCTCGAAGGTGAGCCCGCTGCCTTGCAACAGCTGTTGCAGCGCCTGCACCGGCGCGAGGTTGCCCGATACCGCCGGGGCCTGTTTGCCGGCGACCAGCTCGGGACTGAAAAACAGCTGCAGGCTGGTCTGCTGGCCGAGCTGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1005370‑1005213 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgagctggtCGCCGGCAAACAGGCCCCGGCGGTATCGGGCAACCTCGCGCCGGTGCAGGCGCTGCAACAGCTGTTGCAAGGCAGCGGGCTCACCTTCGAGATGACCGGGGACACCGTTGTGGTGAAGCCTCTGCCGACTACCCTTGACCTGGGCAGC  >  NC_002947/1005265‑1005412                                                                                                                                                                                                                                                                                                                    GGTGTCCCCGGTCATCTCGAAGGTGAGCCCGCTGCCTTGCAACAGCTGTTGCAGCGCCTGCACCGGCGCGAGGTTGCCCGATACCGCCGGGGCCTGTTTGCCGGCGACCAGCTCGGGACTGAAAAACAGCTGCAGGCTGGTCTGCTGGCC                                                                                                                                                              <  1:1930087/150‑1       CCCGGTCATCTCGAAGGTGAGCCCGCTGCCTTGCAACAGCTGTTGCAGCGCCTGCACCGGCGCGAGGTTGCCCGATACCGCCGGGGCCTGTTTGCCGGCGACCAGCTCGGGACTGAAAAACAGCTGCAGGCTGGTCTGCTGGCCGAGCTG                                                                                                                                                        >  2:385506/1‑150        CCGGTCATCTCGAAGGTGAGCCCGCTGCCTTGCAACAGCTGTTGCAGCGCCTGCACCGGCGCGAGGTTGCCCGATACCGCCGGGGCCTGTTTGCCGGCGACCAGCTCGGGACTGAAAAACAGCTGCAGGCTGGTCTGCTGGCCGAGCTGG                                                                                                                                                       >  1:200510/1‑150         CGGTCATCTCGAAGGTGAGCCCGCTGCCTTGCAACAGCTGTTGCAGCGCCTGCACCGGCGCGAGGTTGCCCGATACCGCCGGGGCCTGTTTGCCGGCGACCAGCTCGGGACTGAAAAACAGCTGCAGGCTGGTCTGCTGGCCGAGCTGGT                                                                                                                                                      >  2:1174421/1‑150               TCTCGAAGGTGAGCCCGCTGCCTTGCAACAGCTGTTGCAGCGCCTGCACCGGCGCGAGGTTGCCCGATACCGCCGGGGCCTGTTTGCCGGCGACCAGCTCGGGACTGAAAAACAGCTGCAGGCTGGTCTGCTGGCCGAGCTGG                                                                                                                                                       >  1:1242411/1‑143               TCTCGAAGGTGAGCCCGCTGCCTTGCAACAGCTGTTGCAGCGCCTGCACCGGCGCGAGGTTGCCCGATACCGCCGGGGCCTGTTTGCCGGCGACCAGCTCGGGACTGAAAAACAGCTGCAGGCTGGTCTGCTGGCCGAGCTGG                                                                                                                                                       <  2:1242411/143‑1                                                                                                            CCAGCTCGGGACTGAAAAACAGCTGCAGGCTGGTCTGCTGGCCGAGCTGGTCGCCGGCAAACAGGCCCCGGCGGTATCGGGCAACCTCGCGCCGGTGCAGGCGCTGCAACAGCTGTTGCAAGGCAGCGGGCTCACCTTCGAGATGACCGG                                                   >  1:1415699/1‑150                                                                                                               GCTCGGGACTGAAAAACAGCTGCAGGCTGGTCTGCTGGCCGAGCTGGTCGCCGGCAAACAGGCCCCGGCGGTATCGGGCAACCTCGCGCCGGTGCAGGCGCTGCAACAGCTGTTGCAAGGCAGCGGGCTCACCTTCGAGATGACCGGGGA                                                >  1:1230429/1‑150                                                                                                               GCTCGGGACTGAAAAACAGCTGCAGGCTGGTCTGCTGGCCGAGCTGGTCGCCGGCAAACAGGCCCCGGCGGTATCGGGCAACCTCGCGCCGGTGCAGGCGCTGCAACAGCTGTTGCAAGGCAGCGGGCTCACCTTCGAGATGACCGGGGA                                                <  2:1415699/150‑1                                                                                                                                                     CCGAGCTGGTCGCCGGCAAACAGGCCCCGGCGGTATCGGGCAACCTCGCGCCGGTGCAGGCGCTGCAACAGCTGTTGCAAGGCAGCGGGCTCACCTTCGA                                                            >  2:1010565/1‑100                                                                                                                                                     CCGAGCTGGTCGCCGGCAAACAGGCCCCGGCGGTATCGGGCAACCTCGCGCCGGTGCAGGCGCTGCAACAGCTGTTGCAAGGCAGCGGGCTCACCTTCGA                                                            <  1:1010565/100‑1                                                                                                                                                     CCGAGCTGGTCGCCGGCAAACAGGCCCCGGAGGTAAGGGTCGACGTCGCGCCGGTGCAGGCGCTGCAACAGCTGTTGCAAGGCAGCGGGCTCACCTTCGAGATGACCGGGGACACCGTTGTGGTGAAGCCTCTGCCGACTACCCTTGACC          >  1:1340824/1‑150                                                                                                                                                      CGAGCTGGTCGCCGGCAAACAGGCCCCGGCGGTATCGGGCAACCTCGCGCCGGTGCAGGCGCTGCAACAGCTGTTGCAAGGCAGCGGGCTCACCTTCGAGATGACCGGGGACACCGTTGTGGTGAAGCCTCTGCCGACTACCCTTGACCT         >  2:695455/1‑150                                                                                                                                                      CGAGCTGGTCGCCGGCAAACAGGCCCCGGCGGTATCGGGCAACCTCGCGCCGGTGCAGGCGCTGCAACAGCTGTTGCAAGG                                                                              <  1:213906/81‑1                                                                                                                                                      CGAGCTGGTCGCCGGCAAACAGGCCCCGGCGGTATCGGGCAACCTCGCGCCGGTGCAGGCGCTGCAACAGCTGTTGCAAGG                                                                              >  2:213906/1‑81                                                                                                                                                       GAGCTGGTCGCCGGCAAACAGGCCCCGGCGGTATCGGGCAACCTCGCGCCGGTGCAGGCGCTGCAACAGCTGTTGCAAGGCAGCGGGCTCACCTTCGAGATGACCGGGGACACCGTTGTGGTGAAGCCTCTGCCGACTACCCTTGACCTG        <  2:1340824/150‑1                                                                                                                                                        AGCTGGTCGCCGGCAAACAGGCCCCGGCGGTATCGGGCAACCTCGCGCCGGTGCAGGCGCTGCAACAGCTGTTGCAAGGCAGCGGGCTCACCTTCGAGATGACCGGGGACACCGTTGTGGTGAAGCCTCTGCCGACTACCCTTGACCTGG       >  2:435217/1‑150                                                                                                                                                             GTCGCCCGCAAACACGCCCCGGCGGTCTAGGGCCACATCGCGCTGGTGCAGGCTCTGCAACAGCTGGTGCAAGGCAGCGGGCTCACCTTCGAGATGACCGGGGACACCGTTGTGGTGAAGCCTCTGCCGACTACCCTTGACCTGGGCAGC  <  2:319604/150‑1                                                                                                                                                                                                                                                                                                                    GGTGTCCCCGGTCATCTCGAAGGTGAGCCCGCTGCCTTGCAACAGCTGTTGCAGCGCCTGCACCGGCGCGAGGTTGCCCGATACCGCCGGGGCCTGTTTGCCGGCGACCAGCTCGGGACTGAAAAACAGCTGCAGGCTGGTCTGCTGGCCGAGCTGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1005370‑1005213 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgagctggtCGCCGGCAAACAGGCCCCGGCGGTATCGGGCAACCTCGCGCCGGTGCAGGCGCTGCAACAGCTGTTGCAAGGCAGCGGGCTCACCTTCGAGATGACCGGGGACACCGTTGTGGTGAAGCCTCTGCCGACTACCCTTGACCTGGGCAGC  >  NC_002947/1005265‑1005412

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.