| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1012384 | 60 (0.820) | 4 (0.060) | 4/228 | NT | 6.2% | coding (793/1584 nt) | prfC | peptide chain release factor 3 |
| ? | NC_002947 | = 1012394 | 66 (0.980) | coding (803/1584 nt) | prfC | peptide chain release factor 3 | |||||
GCGCACCTGGGCGACCAGTACGATTCGTTCGTCGAGCAACTGGAGCTGGTGCAGGGCGCTTGCCACGAGTTCAACCAGGAAGAGTTCATCAACGGTCAGCTGACCCCTGTGTTCTTCGGTACTGCACTGGGCAACTTCGGTGTCGACCACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1012234‑1012384‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcgaccacgGCGTCGAGCACGTGGTCGACACCGAAGTTGCCCAGTGCAGTACCGAAGAACACAGGGGTCAGCTGACCGTTGATGAACTCTTCCTGGTTGAACTCGTGGCAAGCGCCCTGCACCAGCTCCAGTTGCTCGACGAACGAATCGTACTGG < NC_002947/1012394‑1012248 GCGCACCTGGGCGACCAGTACGATTCGTTCGTCGAGCAACTGGAGCTGGTGCAGGGCGCTTGCCACGAGTTCAACCAGGAAGAGTTCATCAACGGTCAGCTGACCCCTGTGTTCTTCGGTACTGCACTGGGCAACTTCGGTGTCGACCAC < 2:150897/150‑1 ACGGTCAGCTGACCCCTGTGTTCTTCGGTACTGCACTGGGCAACTTCGGTGTCGACCACGGCGTCGAGCACGTGGTCGA > 1:1296682/1‑79 ACGGTCAGCTGACCCCTGTGTTCTTCGGTACTGCACTGGGCAACTTCGGTGTCGACCACGGCGTCGAGCACGTGGTCGA < 2:1296682/79‑1 CACTGGGCAACTTCGGTGTCGACCACGGCGTCGAGCACGTGGTC > 1:327959/1‑44 CACTGGGCAACTTCGGTGTCGACCACGGCGTCGAGCACGTGGTC < 2:327959/44‑1 CGACCACGGCGTCGAGCACGTGGTCGACACCGAAGTTGCCCAGTGCAGTACCGAAGAACACAGGGGTCAGCTGACCGTTGATGAACTCTTCCTGGTTGAAC < 1:597388/101‑1 CGACCACGGCGTCGAGCACGTGGTCGACACCGAAGTTGCCCAGTGCAGTACCGAAGAACACAGGGGTCAGCTGACCGTTGATGAACTCTTCCTGGTTGAAC > 2:597388/1‑101 GACCACGGCGTCGAGCACGTGGTCGACACCGAAGTTGCCCAGTGCAGTACCGAAGAACACAGGGGTCAGCTGACCGTTGATGAACTCTTCCTGGTTGATCTCGTGGCAAGCGCCCTGCACCAGCTCCAGTTGCTCGACGAACGAATCGTA < 2:215352/150‑1 ACCACGGCGTCGAGCACGTGGTCGACACCGAAGTTGCCCAGTGCAGTACCGAAGAACACAGGGGTCAGCTGACCGTTGATGAACTCTTCCTGGTTGAACTCGTGGCAAGCGCCCTGCACCAGCTCCAGTTGCTCGACGAACGAATCGTAC < 2:1263448/150‑1 ACGGCGTCGAGCACGTGGTCGACACCGAAGTTGCCCAGTGCAGTACCGAAGAACACAGGGGTCAGCTGACCGTTGATGAACTCTTCCTGGTTGAACTCGTGGCAAGCGCCCTGCACCAGCTCCAGTTGCTCGACGAACGAATCGTACTGG < 2:558801/150‑1 CGGCGTCGAGCACGTGGTCGACACCGAAGTTGCCCAGTGCAGTACCGAAGAACACAGGGGTCAGCTGACCGTTGATGAACTCTTCCTGGTT > 1:1387302/1‑91 CGGCGTCGAGCACGTGGTCGACACCGAAGTTGCCCAGTGCAGTACCGAAGAACACAGGGGTCAGCTGACCGTTGATGAACTCTTCCTGGTT < 2:1387302/91‑1 GCGCACCTGGGCGACCAGTACGATTCGTTCGTCGAGCAACTGGAGCTGGTGCAGGGCGCTTGCCACGAGTTCAACCAGGAAGAGTTCATCAACGGTCAGCTGACCCCTGTGTTCTTCGGTACTGCACTGGGCAACTTCGGTGTCGACCACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1012234‑1012384‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcgaccacgGCGTCGAGCACGTGGTCGACACCGAAGTTGCCCAGTGCAGTACCGAAGAACACAGGGGTCAGCTGACCGTTGATGAACTCTTCCTGGTTGAACTCGTGGCAAGCGCCCTGCACCAGCTCCAGTTGCTCGACGAACGAATCGTACTGG < NC_002947/1012394‑1012248 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |