New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 106497990 (1.230)15 (0.220) 8/230 NT 14.7% intergenic (+33/+80) PP_0922/PP_0923 hypothetical protein/acyltransferase
?NC_002947 = 1065023 91 (1.340)intergenic (+77/+36) PP_0922/PP_0923 hypothetical protein/acyltransferase

CTGAGGGGATGGCCGGGGTGATGGTGGAACTGGAGCGGCTGTATGAGCCGCTGCTGGCGGATTTTCGCGAGTTCTACCCGCAGCTGCAGGCGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1064822‑1064979
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggtGAACCCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTATCACCCACACACCTCTAACTGTCAGACATCCGCCCTACCGCCGCAAACGCCTGCAGCTGCGGGTAGAACTCGCGAAAATCCGC  <  NC_002947/1065023‑1064878
                                                                                                                                                                                                                                                                                                                
CTGAGGGGATGGCCGGGGTGATGGTGGAACTGGAGCGGCTGTATGAGCCGCTGCTGGCGGATTTTCGCGAGTTCTACCCGCAGCTGCAGGCGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCT                                                                                                                                                            >  2:1752327/1‑150
 TGAGGGGATGGCCGGGGTGATGGTGGAACTGGAGCGGCTGTATGAGCCGCTGCTGGCGGATTTTCGCGAGTTCTACCCGCAGCTGCAGGCGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTT                                                                                                                                                           >  2:316072/1‑150
 TGAGGGGATGGCCGGGGTGACGGTGGAACTGGAGAGGCTGTATGCGCCGCTGCTGGCGGATTTTCGCGAGTTCTACCCGCAGCTGCAGGCGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGGGTGTGGGTGATACTGGCCTCTT                                                                                                                                                           >  1:1791186/1‑150
   AGGGGATGGCCGGGGTGATGGTGGAACTGGAGCGGCTGTATGAGCCGCTGCTGGCGGATTTTCGCGAGTTCTACCCGCAGCTGCAGGCGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCG                                                                                                                                                         >  1:754526/1‑150
      GGATGGCCGGGGTGATGGTGGAACTGGAGCGGCTGTATGAGCCGCTGCTGGCGGATTTTCGCGAGTTCTACCCGCAGCTGCAGGCGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGG                                                                                                                                                      <  2:1816823/150‑1
      GGATGGCCGGGGTGATGGTGGAACTGGAGCGGCTGTATGAGCCGCTGCTGGCGGATTTTCGCGAGTTCTACCCGCAGCTGCAGGCGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGG                                                                                                                                                      <  1:927702/150‑1
        ATGGCCGGGGTGATGGTGGAACTGGAGCGGCTGTATGAGCCGCTGCTGGCGGATTTTCGCGAGTTCTACCCGCAGCTGCAGGCGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGT                                                                                                                                                    >  1:868701/1‑150
                           AACTGGAGCGGCTGTATGAGCCGCTGCTGGCGGATTTTCGCGAGTTCTACCCGCAGCTGCAGGCGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTGAACCCGCTCCTACACCGA                                                                                                                                 >  1:1817639/1‑150
                            gcaGGAGCGGCTGTATGAGCCGCTGCTGGCGGATTTTCGCGAGTTCTACCCGCAGCTGCAGGCGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTGAACCCGCTCCTACACCGAG                                                                                                                                >  1:1037584/4‑150
                                                CGCTGCTGGCGGATTTTCGCGAGTTCTACCCGCAGCTGCAGGCGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTGAACCCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGG                                                                                                            <  2:1817639/150‑1
                                                CGCTGCTGGCGGATTTTCGCGAGTTCTACCCGCAGCTGCAGGCGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTGAACCCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGG                                                                                                            <  2:1037584/150‑1
                                                                  GCGAGTTCTACCCGCAGCTGCAGGCGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTGAACCCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCG                                                                                                             >  1:675745/1‑131
                                                                  GCGAGTTCTACCCGCAGCTGCAGGCGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTGAACCCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCG                                                                                                             <  2:675745/131‑1
                                                                    GAGTTCTACCCGCAGCTGCAGGCGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGG                                                                                                                                                      >  1:584280/1‑88
                                                                    GAGTTCTACCCGCAGCTGCAGGCGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGG                                                                                                                                                      <  2:584280/88‑1
                                                                            CCCGCAGCTGCAGGCGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCCTTTCGCGGGTGAACCCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTATCACC                                                                                <  1:1722779/150‑1
                                                                                           GTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGG                                                                                                                                                      <  1:1860234/65‑1
                                                                                           GTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGG                                                                                                                                                      >  2:1860234/1‑65
                                                                                                CGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTGAACCCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGGTTTACCCGCGAAGA                                                                                             <  2:583765/117‑1
                                                                                                CGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTGAACCCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGGTTTACCCGCGAAGA                                                                                             >  1:583765/1‑117
                                                                                                        GGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCCTTTCGCGGGTGAACCCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGG                                                                                                           <  2:1472852/95‑1
                                                                                                        GGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCCTTTCGCGGGTGAACCCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGG                                                                                                           <  2:1472895/95‑1
                                                                                                        GGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCCTTTCGCGGGTGAACCCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGG                                                                                                           >  1:1472895/1‑95
                                                                                                        GGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCCTTTCGCGGGTGAACCCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGG                                                                                                           >  1:1472852/1‑95
                                                                                                                   TGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTGAACCCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGG                                                                                                            >  1:554148/1‑83
                                                                                                                   TGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTGAACCCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGG                                                                                                            <  2:554148/83‑1
                                                                                                                                                     TTCGCGGGTAAACCCGCTCCTACGTACAATGCGTTTGGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTATCACCCACACACCTCTACCTGTCAGACATCCGCCCTACCGCCGCAAACGCCTGCAGCTGCGGGTAGAACTCGCGCAAA       >  2:565673/1‑150
                                                                                                                                                          GGGTGAACCCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTATCACCCACACACCTCTAACTGTCAGACATCCGCCCTACCGCCGCAAACGCCTGCAGCTGCGGGTAGAACTCGCGAAAATCCGC  >  1:1084757/1‑150
                                                                                                                                                            GTGAACCCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTATCACCCACACACCTCTAACTGTCAGACATCCGCCCTACCGCCGCAAACGCCTGCAGCTGCGGGTA                    >  1:834274/1‑130
                                                                                                                                                            GTGAACCCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTATCACCCACACACCTCTAACTGTCAGACATCCGCCCTACCGCCGCAAACGCCTGCAGCTGCGGGTA                    <  2:834274/130‑1
                                                                                                                                                                                                                                                                                                                
CTGAGGGGATGGCCGGGGTGATGGTGGAACTGGAGCGGCTGTATGAGCCGCTGCTGGCGGATTTTCGCGAGTTCTACCCGCAGCTGCAGGCGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1064822‑1064979
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggtGAACCCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTATCACCCACACACCTCTAACTGTCAGACATCCGCCCTACCGCCGCAAACGCCTGCAGCTGCGGGTAGAACTCGCGAAAATCCGC  <  NC_002947/1065023‑1064878

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.