New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1099018 =	72 (0.990)	4 (0.060)	4/238	NT	5.9%	coding (553/975 nt)	kdsD	D‑arabinose 5‑phosphate isomerase
	?	NC_002947	1099050 =	59 (0.840)					coding (521/975 nt)	kdsD	D‑arabinose 5‑phosphate isomerase

AGGCCGCCGAGGTCAACCTTGACGCACGTGTCGAACAAGAGGCCTGCCCGCTGAACCTGGCCCCCACCTCCTCCACCACGGCAGCGCTGGTACTGGGCGACGCCTTGGCCATCGCCTTGCTCGAAGCCCGCGGCTTCACCGCCGAGGACTTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1099170‑1099018 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcgAGCAAGGCGATGGCCAAGGCGTCGCCCAGTACCAGCGCTGCCGTGGTGGAGGAGGTGGGGGCCAGGTTCAGCGGGCAGGCCTCTTGTTCGACACGTGCGTCAAGGTTGACCTCGGCGGCCTGGGCCAGCGGCGAGTCCGGGTTGCCGGT  >  NC_002947/1099050‑1099198                                                                                                                                                                                                                                                                                                                AGGCCGCCGAGGTCAACCTTGACGCACGTGTCGAACAAGAGGCCTGCCCGCTGAACCTGGCCCCCACCTCCTCCACCACGGCAGCGCTGGTACTGGGCGACGCCTTGGCCATCGCCTTGCTCGAAGCCCGCGGCTTCACCGCCGAGGACT                                                                                                                                                          >  1:1265375/1‑150   GCCGCCGAGGTCAACCTTGACGCACGTGTCGAACAAGAGGCCTGCCCGCTGAACCTGGCCCCCACCTCCTCCACCACGGCAGCGCTGGTACTGGGCGACGCCTTGGCCATCGCCTTGCTCGAAGCCCGCGGCTTCACCGCCGAGGACTTC                                                                                                                                                        <  1:445656/150‑1   GCCGCCGAGGTCAACCTTGACGCACGTGTCGAACAAGAGGCCTGCCCGCTGAACCTGGCCCCCACCTCCTCCACCACGGCAGCGCTGGTACTGGGCGACGCCTTGGCCATCGCCTTGCTCGAAGCCCGCGGCTTCACCGCCGAGGACTTC                                                                                                                                                        <  1:748673/150‑1                     GACGCACGTGTCGAACAAGAGGCCTGCCCGCTGAACCTGGCCCCCACCTCCTCCACCACGGCAGCGCTGGTACTGGGCGACGCCTTGGCCATCGCCTTGCTCGAAGTCCTCGGCGGTGAAGCCGCGGGCTTCGAGCAAGGCGATGGCCAA                                                                                                                                      <  2:1702400/150‑1                                                                                                                        CTCGAAGCCCGCGGCTTCACCGCCGAGGACTTCGAGCAAGGCGATGGCCAAGGCGTCGCCCAGTACCAGCGCTGCCGTGGTGGAGGAGGTGGGGGCCAGGTTCAGCGGGCAGGCCTCTTGTTCGACACGTGCGTCAAGGTTGACCTCGGC                                   <  1:1702400/150‑1                                                                                                                           GAAGCCCGCGGCTTCACCGCCGAGGACTTCGAGCAAGGCGATGGCCAAGGCGTCGCCCAGTACCAGCGCTGCCGTGGTGGAGGAGGTGGGGGCCAGG                                                                                     <  1:316170/97‑1                                                                                                                           GAAGCCCGCGGCTTCACCGCCGAGGACTTCGAGCAAGGCGATGGCCAAGGCGTCGCCCAGTACCAGCGCTGCCGTGGTGGAGGAGGTGGGGGCCAGG                                                                                     >  2:316170/1‑97                                                                                                                                                      TTCGAGCAAGGCGATGGCCAAGGCGTCGCCCAGTACCAGCGCTGCCGTGGTGGAGGAGGTGGGGGCCAGGTTCAGCGGGCAGGCCTCTTGTTCGACACGTGCGTCAAGGTTGACCTCGGCGGCCTGGGCCAGCGGCGAGTCCGGGTTGCC     >  1:904215/1‑150                                                                                                                                                         GAGCAAGGCGATGGCCAAGGCGTCGCCCAGTACCAGCGCTGCCGTGGTGGAGGAGGTGGGGGCCAGGTTCAGCGGGCAGGCCTCTTGTTCGACACGTGCGTCAAGGTTGACCTCGGCGGCCTGGGCCAGCGGCGAGTCCGGGTTGCCGGT  >  2:153920/1‑150                                                                                                                                                                                                                                                                                                                AGGCCGCCGAGGTCAACCTTGACGCACGTGTCGAACAAGAGGCCTGCCCGCTGAACCTGGCCCCCACCTCCTCCACCACGGCAGCGCTGGTACTGGGCGACGCCTTGGCCATCGCCTTGCTCGAAGCCCGCGGCTTCACCGCCGAGGACTTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1099170‑1099018 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcgAGCAAGGCGATGGCCAAGGCGTCGCCCAGTACCAGCGCTGCCGTGGTGGAGGAGGTGGGGGCCAGGTTCAGCGGGCAGGCCTCTTGTTCGACACGTGCGTCAAGGTTGACCTCGGCGGCCTGGGCCAGCGGCGAGTCCGGGTTGCCGGT  >  NC_002947/1099050‑1099198

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.