| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1119929 = | 69 (0.950) | 4 (0.060) | 4/236 | NT | 5.6% | coding (335/1494 nt) | pepA | cytosol aminopeptidase |
| ? | NC_002947 | 1119963 = | 68 (0.980) | coding (301/1494 nt) | pepA | cytosol aminopeptidase | |||||
TACAGAACCTTTCGGGCCTGAAAGCCGAGCGCGTGCTGCTGGTGGGCAGCGGCAAGGAAGAAGCCCTGGGCGACCGCGCCTGGCGCAAACTGGTGGCCAGTGTCGCTGGCGTGCTCAAGGGCCTGAACGGCGCTGACGCAGTACTGGCCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1120079‑1119929‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccctTGAGCACGCCAGCGACACTGGCCACCAGTTTGCGCCAGGCGCGGTCGCCCAGGGCTTCTTCCTTGCCGCTGCCCACCAGCAGCACGCGCTCGGCTTTCAGGCCCGAAAGGTTCTGTAGCAGCAGGGTCTGGCCCGGCTTACCGGCCA > NC_002947/1119963‑1120109 TACAGAACCTTTCGGGCCTGAAAGCCGAGCGCGTGCTGCTGGTGGGCAGCGGCAAGGAAGAAGCCCTGGGCGACCGCGCCTGGCGCAAACTGGTGGCCAGTGTCGCTGGCGTGCTCAAGGGCCTGAACGGCGCTGACGCAGTACTGGCCC > 2:33077/1‑150 ACAGAACCTTTCGGGCCTGAAAGCCGAGCGCGTGCTGCTGGTGGGCAGCGGCAAGGAAGTAGCCCTGGGCGCACGCGCCTGGCGCAAACTGATGGGCATTGTCGCTGGCGTGCTCAAGGGCCTTAACGGCGCTGACGCAGTACTCGCCCT < 2:261042/150‑1 AAGCCCTGGGCGACCGCGCCTGGCGCAAACTGGTGGCCAGTGTCGCTGGCGTGCTCAAGGGCCTGAACGGCGCTGACGCAGTACTGG < 1:1173372/87‑1 AAGCCCTGGGCGACCGCGCCTGGCGCAAACTGGTGGCCAGTGTCGCTGGCGTGCTCAAGGGCCTGAACGGCGCTGACGCAGTACTGG > 2:1173372/1‑87 GCCAGTGTCGCTGGCGTGCTCAAGGGCCTGAACGGCGCTGACGCAGTACTG < 1:903875/51‑1 GCCAGTGTCGCTGGCGTGCTCAAGGGCCTGAACGGCGCTGACGCAGTACTG > 2:903875/1‑51 TGGCGTGCTCAAGGGCCTGAACGGCGCTGACGCAGTACTGGCCCTTGAGCACGCCAGCGACACTGGCCACCAGTTTGCGCCAGGCGCGGTCGCCCAGGGCTTCTTCCTT < 1:1220119/109‑1 TGGCGTGCTCAAGGGCCTGAACGGCGCTGACGCAGTACTGGCCCTTGAGCACGCCAGCGACACTGGCCACCAGTTTGCGCCAGGCGCGGTCGCCCAGGGCTTCTTCCTT > 2:1220119/1‑109 TCAAGGGCCTGAACGGCGCTGACGCAGTACTGGCCCTTGAGCACGCCAGCGACACTGGCCACCAGTTTGCGCCAGGCGCGGTCGCCCAGGGCTTCTTCCTTGCCGCTGCCCA > 1:360431/1‑112 TCAAGGGCCTGAACGGCGCTGACGCAGTACTGGCCCTTGAGCACGCCAGCGACACTGGCCACCAGTTTGCGCCAGGCGCGGTCGCCCAGGGCTTCTTCCTTGCCGCTGCCCA < 2:360431/112‑1 GCCCTTGAGCACGCCAGCGACACTGGCCACCAGTTTGCGCCAGGCGCGGTCGCCCAGGGCTTCTTCCTTGCCGCTGCCCACCAGCAGCACGCGCTCGGCTTTCAGGCCCGAAAGGTTCTGTAGCAGCAGGGTCTGGCCCGGCTTACCGGC > 2:1754547/1‑150 CCTTGAGCACGCCAGCGACACTGGCCACCAGTTTGCGCCAGGCGCGGTCGCCCAGGGCTTCTTCCTTGCCGCTGCCCACCAGCAGCACGCGCTCGGCTTTCAGGCCCGAAAGGTTCTGTAGCAGCAGGGTCTGGCCCGGCTTACCGGCCA < 1:699216/150‑1 CCTTGAGCACGCCAGCGACACTGGCCACCAGTTTGCGCCAGGCGCGGTCGCCCAGGGCTTCTTCCTTGCCGCTGCCCACCAGCAGCACGCGCTCGGCTTTCAGGCCCGAAAGGTTCTGTAGCA > 1:851935/1‑123 CCTTGAGCACGCCAGCGACACTGGCCACCAGTTTGCGCCAGGCGCGGTCGCCCAGGGCTTCTTCCTTGCCGCTGCCCACCAGCAGCACGCGCTCGGCTTTCAGGCCCGAAAGGTTCTGTAGCA < 2:851935/123‑1 TACAGAACCTTTCGGGCCTGAAAGCCGAGCGCGTGCTGCTGGTGGGCAGCGGCAAGGAAGAAGCCCTGGGCGACCGCGCCTGGCGCAAACTGGTGGCCAGTGTCGCTGGCGTGCTCAAGGGCCTGAACGGCGCTGACGCAGTACTGGCCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1120079‑1119929‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccctTGAGCACGCCAGCGACACTGGCCACCAGTTTGCGCCAGGCGCGGTCGCCCAGGGCTTCTTCCTTGCCGCTGCCCACCAGCAGCACGCGCTCGGCTTTCAGGCCCGAAAGGTTCTGTAGCAGCAGGGTCTGGCCCGGCTTACCGGCCA > NC_002947/1119963‑1120109 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |