| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1164495 = | 67 (0.920) | 3 (0.040) | 3/234 | NT | 5.1% | coding (796/855 nt) | yeaD | glucose‑6‑phosphate 1‑epimerase |
| ? | NC_002947 | 1164551 = | 48 (0.700) | coding (852/855 nt) coding (860/864 nt) |
yeaD hexR |
glucose‑6‑phosphate 1‑epimerase DNA‑binding transcriptional regulator |
|||||
GCATGACCCTGCGCCGCGGCGTGGACTTCCAGCCTCACCTGCGCAAGATCAAGGAAAGCCTCAACGCCAGCCGTTACCCGATCGAGGACGACGACCTCAACTGAGCCGGTGCGCCTGCAAACGCAGGTGCGCACGCTGCCCAGGTGCCAGGCTCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1164650‑1164495‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctcagTTGAGGTCGTCGTCCTCGATCGGGTAACGGCTGGCGTTGAGGCTTTCCTTGATCTTGCGCAGGTGAGGCTGGAAGTCCACGCCGCGGCGCAGGGTCATGCCGGTGGCCAGTACATCGAGCACGGTCAGCTGGATGATCCGCGAGGTCAT > NC_002947/1164551‑1164699 GCATGACCCTGCGCCGCGGCGTGGACTTCCAGCCTCACCTGCGCAAGATCAAGGAAAGCCTCAACGCCAGCCGTTACCCGATCGAGGACGACGACCTCAACTGAGCCGGTGCGCCTGCAAACGCAGGTGCGCACGCTGCCCAGGTGCCAG < 1:187682/150‑1GCATGACCCTGCGCCGCGGCGTGGACTTCCAGCCTCACCTGCGCAAGATCAAGGAAAGCCTCAACGCCAGCCGTTACCCGATCGAGGACGACGACCTCAACTGAGCCGGTGCGCCTGCAAACGCAGGTGCGCACGCTGCCCAGGTGCCAG > 2:1903354/1‑150 CATGACCCTGCGCCGCGGCGTGGACTTCCAGCCTCACCTGCGCAAGATCAAGGAAAGCCTCAACGCCAGCCGTTACCCGATCGAGGACGACGACCTCAACTGAGCCGGTGCGCCTGCAAACGCAGGTGCGCACGCTGCCCAGGTGCCAG > 1:167216/1‑149 CATGACCCTGCGCCGCGGCGTGGACTTCCAGCCTCACCTGCGCAAGATCAAGGAAAGCCTCAACGCCAGCCGTTACCCGATCGAGGACGACGACCTCAACTGAGCCGGTGCGCCTGCAAACGCAGGTGCGCACGCTGCCCAGGTGCCAG < 2:167216/149‑1 GACCCTGCGCCGCGGCGTGGACTTCCAGCCTCACCTGCGCAAGATCAAGGAAAGCCTCAACGCCAGCCGTTACCCGATCGAGGACGACGACCTCAACTGAGCCGGTGCGCCTGCAAACGCAGGTGCGCACGCTGCCCAGGTGCCAGGCTC < 1:1418124/150‑1 CCCTGCGCCGCGGCGTGGACTTCCAGCCTCACCTGCGCAAGATCAAGGAAAGCCTCAACGCCAGCCGTTACCCGATCGAGGACGACGACCTCAACTGAGCCGGTGCGCCTACAAGCGCAGGTGCGCACGCTGCCCAGGTGCCAGGCGCAG > 1:1372423/1‑150 GCAAGATCAAGGAAAGCCTCAACGCCAGCCGTTACCCGATCGAGGACGACTACCTCAACTGAGCCGGTGCGCCTGCAAACGCAGGTGCGCACGCTGCCCAGGTGCCAGGCTCAG > 2:1479042/1‑114 GCAAGATCAAGGAAAGCCTCAACGCCAGCCGTTACCCGATCGAGGACGACGACCTCAACTGAGCCGGTGCGCCTGCAAACGCAGGTGCGCACGCTGCCCAGGTGCCAGGCTCAG < 1:1479042/114‑1 CCTCAACGCCAGCCGTTACCCGATCGAGGACGACGACCTCAACTGAGCCGGTGCGCCTGCAAACGCAGGTGCGCACGCTGCCCAGGTGCCAGGCTC < 1:1904590/96‑1 CCTCAACGCCAGCCGTTACCCGATCGAGGACGACGACCTCAACTGAGCCGGTGCGCCTGCAAACGCAGGTGCGCACGCTGCCCAGGTGCCAGGCTC > 2:1904590/1‑96 CAACTGAGCCGGTGCGCCTGCAAACGCAGGTGCGCACGCTGCCCAGGTGCCAGGCTCAGTTGAGGTCGTCGTCCTCGATCGGGTAACGGCTGGCGTTGAGGCTTTCCTTGATCTTGCGCAGGTGAGGCTGGAAGTCCACGCCGCGGCGCA > 2:682802/1‑150 AACTGAGCCGGTGCGCCTGCAAACGCAGGTGCGCACGCTGCCCAGGTGCCAGGCTCAGTTGAGGTCGTCGTCCTCGATCGGGTAACGGCTGGCGTTGAGGCTTTCCTTGATCTTGCGCAGGTGAGGCTGGAAGTCCACGCCGCGGCGCAG < 1:193383/150‑1 AACTGAGCCGGTGCGCCTGCAAACGCAGGTGCGCACGCTGCCCAGGTGCCAGGCTCAGTTGAGGTCGTCGTCCTCGATCGGGTAACGGCTGGCGTTGAGGCTTTCCTTGATCTTGCGCAGGTGAGGCTGGAAGTCCACGCCGCGGCGCAG > 2:193383/1‑150 GGCTCAGTTGAGGTCGTCGTCCTCGATCGGGTAACGGCTGGCGTTGAGGCTTTCCTTGATCTTGCGCAGGTGAGGCTGGAAGTCCACGCCGCGGCGCAGGGTCATGCCGGTGGCCAGTACATCGAGCACGGTCAGCTGGATGATCCGCGA < 1:387561/150‑1 GGCTCAGTTGAGGTCGTCGTCCTCGATCGGGTAACGGCTGGCGTTGAGGCTTTCCTTGATCTTGCGCAGGTGAGGCTGGAAGTCCACGCCGCGGCGCAGGGTCATGCCGGTGGCCAGTACATCGAGCACGGTCAGCTGGATGATCCGCGA < 1:1246197/150‑1 GCTCAGTTGAGGTCGTCGTCCTCGATCGGGTAACGGCTGGCGTTGAGGCTTTCCTTGATCTTGCGCAGGTGAGGCTGGAAGTCCACGCCGCGGCGCAGGGTCATGCCGGTGGCCAGTACATCGAGCACGGTCAGCTGGATGATCCGCGAG > 2:449440/1‑150 GCTCAGTTGAGGTCGTCGTCCTCGATCGGGTAACGACTGGCGTTGAGGCTTTCCTTCATCTTGCGCAGGTGAGGCTGGAAGTCCACGCCGCGGCGCAGGGTCATGCCGGTGGCCAGTACATCGAGCACGGTCAGCTGGATGATCCGCGAG > 2:1258959/1‑150 GTTGAGGTCGTCGTCCTCGATCGGGTAACGGCTGGCGTTGAGGCTTTCCTTGATCTTGCGCAGGTGAGGCTGGAAGTCCACGCCGCGGCGCAGGGTCATGCCGGTGGCCAGTACATCGAGCACGGTCAGCTGGATGATCCGCGAGGTCAT < 1:1123617/150‑1 GTTGAGGTCGTCGTCCTCGATCGGGTAACGGCTGGCGTTGAGGCTTTCCTTGATCTTGCGCAGGTGAGGCTGGAAGTCCACGCCGCGGCGCAGGGTCATGCCGGTGGCCAGTACATCGAGCACGGTCAGCTGGATGATCCGCGAGGTCAT > 1:1722995/1‑150 GCATGACCCTGCGCCGCGGCGTGGACTTCCAGCCTCACCTGCGCAAGATCAAGGAAAGCCTCAACGCCAGCCGTTACCCGATCGAGGACGACGACCTCAACTGAGCCGGTGCGCCTGCAAACGCAGGTGCGCACGCTGCCCAGGTGCCAGGCTCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1164650‑1164495‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctcagTTGAGGTCGTCGTCCTCGATCGGGTAACGGCTGGCGTTGAGGCTTTCCTTGATCTTGCGCAGGTGAGGCTGGAAGTCCACGCCGCGGCGCAGGGTCATGCCGGTGGCCAGTACATCGAGCACGGTCAGCTGGATGATCCGCGAGGTCAT > NC_002947/1164551‑1164699 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |