New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 117281176 (1.040)6 (0.090) 6/232 NT 7.5% coding (248/1380 nt) xseA exodeoxyribonuclease 7 large subunit
?NC_002947 = 1172822 78 (1.140)coding (237/1380 nt) xseA exodeoxyribonuclease 7 large subunit

TGAACAGCCCCTCGGCCCCGAGCTTTTCCTTCAGGGCCTCGAAAGCCAGGCGCAGCGCGCCATCACCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGCACCCGCACCGCCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1172659‑1172811
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccaggcGCTGCGCG‑ACGGCCTGGCGGTGCGGGTGCGTGGCAAGGTTTCGCTGTTCGAGGGGCGTGGCGACTACCAGCTTATTCTCGACACCGTCGAGCCAGCCGGTGATGGCGCGCTGCGCCTGGCTTTCGAGGCCCTGAAGGAAAAGCTCGG  <  NC_002947/1172822‑1172676
                                                                                                                                                                                                                                                                                                             
TGAACAGCCCCTCGGCCCCGAGCTTTTCCTTCAGGGCCTCGAAAGCCAGGCGCAGCGCGCCATCACCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGCACCCGCACCGCCA                                                                                                                                                         <  1:345127/150‑1
    CAGCCCCTCGGCCCCGAGCTTTTCCTTCAGGGCCTCGAAAGCCAGGCGCAGCGCGCCATCACCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGCACCCGCACCGC                                                                                                                                                           <  1:1416670/144‑1
    CAGCCCCTCGGCCCCGAGCTTTTCCTTCAGGGCCTCGAAAGCCAGGCGCAGCGCGCCATCACCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGCACCCGCACCGC                                                                                                                                                           >  2:1416670/1‑144
                CCCGAGCTTTTCCTTCAGGGCCTCGAAAGCCAGGCGCAGCGCGCCATCACCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGCACCCGCACCGCCAGGCGCTGCGCG‑ACGGC                                                                                                                                        >  1:1071547/1‑150
                        TTTCCTTCAGGGCCTCGAAAGCCAGGCGCAGCGCGCCATCACCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGCACCCGCACCGCCAGGCGCTGCGCG‑ACGGCCTGGCGGT                                                                                                                                <  2:1071547/150‑1
                                 GGGCCTCGAAAGCCAGGCGCAGCGCGCCATCACCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGCACCCGCACCGCCAGG                                                                                                                                                       >  1:415974/1‑119
                                 GGGCCTCGAAAGCCAGGCGCAGCGCGCCATCACCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGCACCCGCACCGCCAGG                                                                                                                                                       <  2:415974/119‑1
                                                                                                                           AAACCTTGCCACGCCCCCGCACCGCCAGGC‑CGTCGCGCAGCGCCTGGCGGTGCGGGTGCGTGGCAAGGTTTCGCTGTTCGAGGGGCGTGGCGACTACCAGCTTATTCTCGACACCGT                                                              <  1:436971/117‑1
                                                                                                                           AAACCTTGCCACGCACCCGCACCGCCAGGC‑CGTCGCGCAGCGCCTGGCGGTGCGGGTGCGTGGCAAGGTTTCGCTGTTCGAGGGGCGTGGCGACTACCAGCTTATTCTCGACACCGT                                                              >  2:436971/1‑117
                                                                                                                                     ACGCACCCGCACCGCCAGGC‑CGTCGCGCAGCGCCTGGCGGTGCGGGTGCGTGGCAAGGTTTCGCTGTTCGAGGGGCGTGGCGACTACCAGCTTATTCTCGACACCGTCGA                                                           >  1:1138846/1‑110
                                                                                                                                     ACGCACCCGCACCGCCAGGC‑CGTCGCGCAGCGCCTGGCGGTGCGGGTGCGTGGCAAGGTTTCGCTGTTCGAGGGGCGTGGCGACTACCAGCTTATTCTCGACACCGTCGA                                                           <  2:1138846/110‑1
                                                                                                                                                  GCCAGGCGCTGTGCG‑ACGGCCTGGCGGTGCGGGTGCGTGGCAAGGTTTCGCTGTTCGAGGGGCGTGGCGACTACCAGCTTATTCTCGACACCGTCGA                                                           >  2:976864/1‑97
                                                                                                                                                  GCCAGGCGCTGTGCG‑ACGGCCTGGCGGTGCGGGTGCGTGGCAAGGTTTCGCTGTTCGAGGGGCGTGGCGACTACCAGCTTATTCTCGACACCGTCGA                                                           <  1:976864/97‑1
                                                                                                                                                  GCCAGGCGCTGCGCG‑ACGGCCTGGCGGTGCGGGTGCGTGGCAAGGTTTCGCTGTTCGAGGGGCGTGGCGACTACCAGCTTATTCTCGACACCGTCGAGCCAGCCGGTGATGGCGCGCTGCGCCTGGCTTTCGAGGCCCTGAAGGAAAAGC      >  1:1423089/1‑150
                                                                                                                                                  GCCAGGCGCTGCGCG‑ACGGCCTGGCGGTGCGGGTGCGTGGCAAG                                                                                                                >  1:678255/1‑44
                                                                                                                                                  GCCAGGCGCTGCGCG‑ACGGCCTGGCGGTGCGGGTGCGTGGCAAG                                                                                                                <  2:678255/44‑1
                                                                                                                                                    CAGGCGCTGCGCG‑ACGGCCTGGCGGTGCGGGTGCGTGGCAAGGTTTCGCTGTTCGAGGGGCGTGGCGACTACCAGCTTATTCTC                                                                      <  2:1797835/84‑1
                                                                                                                                                    CAGGCGCTGCGCG‑ACGGCCTGGCGGTGCGGGTGCGTGGCAAGGTTTCGCTGTTCGAGGGGCGTGGCGACTACCAGCTTATTCTC                                                                      >  1:1797835/1‑84
                                                                                                                                                      GGCGCTGCGCG‑ACGGCCTGGCGGTGCGGGTGCGTGGCAAGGTTTCGCTGTTCGAGGGGCGTGGCGACTACCAGCTTATTCTCGACACCGTCGAGCCAGCCGGTGATGGCGCGCTGCGCCTGGCTTTCGAGGCCCTGAAGGAAAAGCTCGG  <  2:834650/150‑1
                                                                                                                                                                                                                                                                                                             
TGAACAGCCCCTCGGCCCCGAGCTTTTCCTTCAGGGCCTCGAAAGCCAGGCGCAGCGCGCCATCACCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGCACCCGCACCGCCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1172659‑1172811
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccaggcGCTGCGCG‑ACGGCCTGGCGGTGCGGGTGCGTGGCAAGGTTTCGCTGTTCGAGGGGCGTGGCGACTACCAGCTTATTCTCGACACCGTCGAGCCAGCCGGTGATGGCGCGCTGCGCCTGGCTTTCGAGGCCCTGAAGGAAAAGCTCGG  <  NC_002947/1172822‑1172676

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.