New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1285024	75 (1.030)	4 (0.060)	4/246	NT	5.1%	coding (249/795 nt)	PP_1122	OmpA family protein
	?	NC_002947	= 1285063	75 (1.040)					coding (288/795 nt)	PP_1122	OmpA family protein

TTGCCGCTGTTGGTGGCTGCCAGCCTGCTCACGGGCTGCGCTACGCACAGCGATGGCAGCGCGCCCCTCAATCAAAGGACCTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1284875‑1285024 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gCCCGCCGGCAATGGCGCCCAAGGCGCCACCACCGGCGGCCCAGGAAGAACTCTCGATGGCACCAAGGCCACCACCGACCAAGCCGCCCAGCAGGCTGCAGATGGGCCAGGTCCTTTGATTGAGGGGCGCGCTGCCATCGCTGTGCGTAG  <  NC_002947/1285063‑1284915                                                                                                                                                                                                                                                                                                             TTGCCGCTGTTGGTGGCTGCCAGCCTGCTCACGGGCTGCGCTACGCACAGCGATGGCAGCGCGCCCCTCAATCAAAGGACCTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGG                                                                                                                                                       <  1:1865792/150‑1                                                                                 CTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGCCCGCCGGCAATGGCGCCCAAGGCGCCACCACCGGCGGCCCAGGAAGAACTCTCGA                                                                                               <  1:174744/126‑1                                                                                 CTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGCCCGCCGGCAATGGCGCCCAAGGCGCCACCACCGGCGGCCCAGGAAGAACTCTCGA                                                                                               >  2:174744/1‑126                                                                                                     TGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGCCCGCCGGCAATGGCGCCCAAGGCGCCACCACCGGCGGCCCAGGAAGAA                                                                                                      >  1:361371/1‑99                                                                                                     TGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGCCCGCCGGCAATGGCGCCCAAGGCGCCACCACCGGCGGCCCAGGAAGAA                                                                                                      <  2:361371/99‑1                                                                                                                                                      GCCCGCCGGCAATGGCGCCCAAGGCGCCACCACCGGCGGCCCAGGAAGAACTCTCGATGGCACCAAGGCCACCACCGACCAAGCCGCCCAGCAGGCTGCAGATGGGCCAGGTCCTTTGATTGAGGGGCGCGCTGCCATCGCTGTGCGTAG  <  2:328258/150‑1                                                                                                                                                                                                                                                                                                             TTGCCGCTGTTGGTGGCTGCCAGCCTGCTCACGGGCTGCGCTACGCACAGCGATGGCAGCGCGCCCCTCAATCAAAGGACCTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1284875‑1285024 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gCCCGCCGGCAATGGCGCCCAAGGCGCCACCACCGGCGGCCCAGGAAGAACTCTCGATGGCACCAAGGCCACCACCGACCAAGCCGCCCAGCAGGCTGCAGATGGGCCAGGTCCTTTGATTGAGGGGCGCGCTGCCATCGCTGTGCGTAG  <  NC_002947/1285063‑1284915

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.